data_4ENH # _model_server_result.job_id t2ixj_DcN2K0cWy6ck3JVg _model_server_result.datetime_utc '2024-10-13 09:15:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4enh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4ENH # _exptl.entry_id 4ENH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ENH _cell.length_a 121.13 _cell.length_b 121.13 _cell.length_c 141.9 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ENH _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 389 A CYS 437 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N12 FVX . A FVX 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 172 n n CHA C4D HEM doub 173 n n CHA HHA HEM sing 174 n n CHB C4A HEM sing 175 n n CHB C1B HEM doub 176 n n CHB HHB HEM sing 177 n n CHC C4B HEM sing 178 n n CHC C1C HEM doub 179 n n CHC HHC HEM sing 180 n n CHD C4C HEM doub 181 n n CHD C1D HEM sing 182 n n CHD HHD HEM sing 183 n n C1A C2A HEM doub 184 n y C1A NA HEM sing 185 n y C2A C3A HEM sing 186 n y C2A CAA HEM sing 187 n n C3A C4A HEM doub 188 n y C3A CMA HEM sing 189 n n C4A NA HEM sing 190 n y CMA HMA HEM sing 191 n n CMA HMAA HEM sing 192 n n CMA HMAB HEM sing 193 n n CAA CBA HEM sing 194 n n CAA HAA HEM sing 195 n n CAA HAAA HEM sing 196 n n CBA CGA HEM sing 197 n n CBA HBA HEM sing 198 n n CBA HBAA HEM sing 199 n n CGA O1A HEM doub 200 n n CGA O2A HEM sing 201 n n C1B C2B HEM sing 202 n n C1B NB HEM sing 203 n n C2B C3B HEM doub 204 n n C2B CMB HEM sing 205 n n C3B C4B HEM sing 206 n n C3B CAB HEM sing 207 n n C4B NB HEM doub 208 n n CMB HMB HEM sing 209 n n CMB HMBA HEM sing 210 n n CMB HMBB HEM sing 211 n n CAB CBB HEM doub 212 n n CAB HAB HEM sing 213 n n CBB HBB HEM sing 214 n n CBB HBBA HEM sing 215 n n C1C C2C HEM sing 216 n y C1C NC HEM sing 217 n y C2C C3C HEM doub 218 n y C2C CMC HEM sing 219 n n C3C C4C HEM sing 220 n y C3C CAC HEM sing 221 n n C4C NC HEM sing 222 n y CMC HMC HEM sing 223 n n CMC HMCA HEM sing 224 n n CMC HMCB HEM sing 225 n n CAC CBC HEM doub 226 n n CAC HAC HEM sing 227 n n CBC HBC HEM sing 228 n n CBC HBCA HEM sing 229 n n C1D C2D HEM sing 230 n n C1D ND HEM doub 231 n n C2D C3D HEM doub 232 n n C2D CMD HEM sing 233 n n C3D C4D HEM sing 234 n n C3D CAD HEM sing 235 n n C4D ND HEM sing 236 n n CMD HMD HEM sing 237 n n CMD HMDA HEM sing 238 n n CMD HMDB HEM sing 239 n n CAD CBD HEM sing 240 n n CAD HAD HEM sing 241 n n CAD HADA HEM sing 242 n n CBD CGD HEM sing 243 n n CBD HBD HEM sing 244 n n CBD HBDA HEM sing 245 n n CGD O1D HEM doub 246 n n CGD O2D HEM sing 247 n n O2A H2A HEM sing 248 n n O2D H2D HEM sing 249 n n FE NA HEM sing 250 n n FE NB HEM sing 251 n n FE NC HEM sing 252 n n FE ND HEM sing 253 n n # _atom_sites.entry_id 4ENH _atom_sites.fract_transf_matrix[1][1] 0.008256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007047 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 500 HEM HEM . C 3 FVX A 1 602 501 FVX FVX . D 4 HOH A 1 701 1 HOH HOH . D 4 HOH A 2 702 2 HOH HOH . D 4 HOH A 3 703 3 HOH HOH . D 4 HOH A 4 704 4 HOH HOH . D 4 HOH A 5 705 5 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 7 HOH HOH . D 4 HOH A 8 708 8 HOH HOH . D 4 HOH A 9 709 9 HOH HOH . D 4 HOH A 10 710 10 HOH HOH . D 4 HOH A 11 711 11 HOH HOH . D 4 HOH A 12 712 12 HOH HOH . D 4 HOH A 13 713 13 HOH HOH . D 4 HOH A 14 714 14 HOH HOH . D 4 HOH A 15 715 15 HOH HOH . D 4 HOH A 16 716 16 HOH HOH . D 4 HOH A 17 717 17 HOH HOH . D 4 HOH A 18 718 18 HOH HOH . D 4 HOH A 19 719 19 HOH HOH . D 4 HOH A 20 720 20 HOH HOH . D 4 HOH A 21 721 21 HOH HOH . D 4 HOH A 22 722 22 HOH HOH . D 4 HOH A 23 723 23 HOH HOH . D 4 HOH A 24 724 24 HOH HOH . D 4 HOH A 25 725 25 HOH HOH . D 4 HOH A 26 726 26 HOH HOH . D 4 HOH A 27 727 27 HOH HOH . D 4 HOH A 28 728 28 HOH HOH . D 4 HOH A 29 729 29 HOH HOH . D 4 HOH A 30 730 30 HOH HOH . D 4 HOH A 31 731 31 HOH HOH . D 4 HOH A 32 732 32 HOH HOH . D 4 HOH A 33 733 33 HOH HOH . D 4 HOH A 34 734 34 HOH HOH . D 4 HOH A 35 735 35 HOH HOH . D 4 HOH A 36 736 36 HOH HOH . D 4 HOH A 37 737 37 HOH HOH . D 4 HOH A 38 738 38 HOH HOH . D 4 HOH A 39 739 39 HOH HOH . D 4 HOH A 40 740 40 HOH HOH . D 4 HOH A 41 741 41 HOH HOH . D 4 HOH A 42 742 42 HOH HOH . D 4 HOH A 43 743 43 HOH HOH . D 4 HOH A 44 744 44 HOH HOH . D 4 HOH A 45 745 45 HOH HOH . D 4 HOH A 46 746 46 HOH HOH . D 4 HOH A 47 747 47 HOH HOH . D 4 HOH A 48 748 48 HOH HOH . D 4 HOH A 49 749 49 HOH HOH . D 4 HOH A 50 750 50 HOH HOH . D 4 HOH A 51 751 51 HOH HOH . D 4 HOH A 52 752 52 HOH HOH . D 4 HOH A 53 753 53 HOH HOH . D 4 HOH A 54 754 54 HOH HOH . D 4 HOH A 55 755 55 HOH HOH . D 4 HOH A 56 756 56 HOH HOH . D 4 HOH A 57 757 57 HOH HOH . D 4 HOH A 58 758 58 HOH HOH . D 4 HOH A 59 759 59 HOH HOH . D 4 HOH A 60 760 60 HOH HOH . D 4 HOH A 61 761 61 HOH HOH . D 4 HOH A 62 762 62 HOH HOH . D 4 HOH A 63 763 63 HOH HOH . D 4 HOH A 64 764 64 HOH HOH . D 4 HOH A 65 765 65 HOH HOH . D 4 HOH A 66 766 66 HOH HOH . D 4 HOH A 67 767 67 HOH HOH . D 4 HOH A 68 768 68 HOH HOH . D 4 HOH A 69 769 69 HOH HOH . D 4 HOH A 70 770 70 HOH HOH . D 4 HOH A 71 771 71 HOH HOH . D 4 HOH A 72 772 72 HOH HOH . D 4 HOH A 73 773 73 HOH HOH . D 4 HOH A 74 774 74 HOH HOH . D 4 HOH A 75 775 75 HOH HOH . D 4 HOH A 76 776 76 HOH HOH . D 4 HOH A 77 777 77 HOH HOH . D 4 HOH A 78 778 78 HOH HOH . D 4 HOH A 79 779 79 HOH HOH . D 4 HOH A 80 780 80 HOH HOH . D 4 HOH A 81 781 81 HOH HOH . D 4 HOH A 82 782 82 HOH HOH . D 4 HOH A 83 783 83 HOH HOH . D 4 HOH A 84 784 84 HOH HOH . D 4 HOH A 85 785 85 HOH HOH . D 4 HOH A 86 786 86 HOH HOH . D 4 HOH A 87 787 87 HOH HOH . D 4 HOH A 88 788 88 HOH HOH . D 4 HOH A 89 789 89 HOH HOH . D 4 HOH A 90 790 90 HOH HOH . D 4 HOH A 91 791 91 HOH HOH . D 4 HOH A 92 792 92 HOH HOH . D 4 HOH A 93 793 93 HOH HOH . D 4 HOH A 94 794 94 HOH HOH . D 4 HOH A 95 795 95 HOH HOH . D 4 HOH A 96 796 96 HOH HOH . D 4 HOH A 97 797 97 HOH HOH . D 4 HOH A 98 798 98 HOH HOH . D 4 HOH A 99 799 99 HOH HOH . D 4 HOH A 100 800 100 HOH HOH . D 4 HOH A 101 801 101 HOH HOH . D 4 HOH A 102 802 102 HOH HOH . D 4 HOH A 103 803 103 HOH HOH . D 4 HOH A 104 804 104 HOH HOH . D 4 HOH A 105 805 105 HOH HOH . D 4 HOH A 106 806 106 HOH HOH . D 4 HOH A 107 807 107 HOH HOH . D 4 HOH A 108 808 108 HOH HOH . D 4 HOH A 109 809 109 HOH HOH . D 4 HOH A 110 810 110 HOH HOH . D 4 HOH A 111 811 111 HOH HOH . D 4 HOH A 112 812 112 HOH HOH . D 4 HOH A 113 813 113 HOH HOH . D 4 HOH A 114 814 114 HOH HOH . D 4 HOH A 115 815 115 HOH HOH . D 4 HOH A 116 816 116 HOH HOH . D 4 HOH A 117 817 117 HOH HOH . D 4 HOH A 118 818 118 HOH HOH . D 4 HOH A 119 819 119 HOH HOH . D 4 HOH A 120 820 120 HOH HOH . D 4 HOH A 121 821 121 HOH HOH . D 4 HOH A 122 822 122 HOH HOH . D 4 HOH A 123 823 123 HOH HOH . D 4 HOH A 124 824 124 HOH HOH . D 4 HOH A 125 825 125 HOH HOH . D 4 HOH A 126 826 126 HOH HOH . D 4 HOH A 127 827 127 HOH HOH . D 4 HOH A 128 828 128 HOH HOH . D 4 HOH A 129 829 129 HOH HOH . D 4 HOH A 130 830 130 HOH HOH . D 4 HOH A 131 831 131 HOH HOH . D 4 HOH A 132 832 132 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 1.833 30.853 -27.458 1 26.82 ? CHA HEM 601 A 1 HETATM 2 C CHB HEM . . . B 2 -2.619 28.973 -26.895 1 19.51 ? CHB HEM 601 A 1 HETATM 3 C CHC HEM . . . B 2 -0.811 24.557 -27.799 1 24.2 ? CHC HEM 601 A 1 HETATM 4 C CHD HEM . . . B 2 3.608 26.609 -28.088 1 29.94 ? CHD HEM 601 A 1 HETATM 5 C C1A HEM . . . B 2 0.342 30.732 -27.347 1 23.33 ? C1A HEM 601 A 1 HETATM 6 C C2A HEM . . . B 2 -0.57 31.866 -26.959 1 22.74 ? C2A HEM 601 A 1 HETATM 7 C C3A HEM . . . B 2 -1.771 31.316 -26.935 1 22.02 ? C3A HEM 601 A 1 HETATM 8 C C4A HEM . . . B 2 -1.612 29.818 -26.98 1 20.88 ? C4A HEM 601 A 1 HETATM 9 C CMA HEM . . . B 2 -3.045 32.055 -26.541 1 17.79 ? CMA HEM 601 A 1 HETATM 10 C CAA HEM . . . B 2 -0.162 32.842 -25.865 1 24.23 ? CAA HEM 601 A 1 HETATM 11 C CBA HEM . . . B 2 0.232 34.124 -26.537 1 25.1 ? CBA HEM 601 A 1 HETATM 12 C CGA HEM . . . B 2 0.524 35.156 -25.487 1 26.19 ? CGA HEM 601 A 1 HETATM 13 O O1A HEM . . . B 2 1.066 34.92 -24.396 1 24.55 ? O1A HEM 601 A 1 HETATM 14 O O2A HEM . . . B 2 0.176 36.369 -25.845 1 24.13 ? O2A HEM 601 A 1 HETATM 15 C C1B HEM . . . B 2 -2.574 27.543 -27.292 1 18.06 ? C1B HEM 601 A 1 HETATM 16 C C2B HEM . . . B 2 -3.583 26.7 -27.03 1 18.95 ? C2B HEM 601 A 1 HETATM 17 C C3B HEM . . . B 2 -3.115 25.33 -27.374 1 18.02 ? C3B HEM 601 A 1 HETATM 18 C C4B HEM . . . B 2 -1.658 25.556 -27.538 1 21.16 ? C4B HEM 601 A 1 HETATM 19 C CMB HEM . . . B 2 -5.007 27.104 -26.704 1 18.74 ? CMB HEM 601 A 1 HETATM 20 C CAB HEM . . . B 2 -3.69 24.141 -27.208 1 18.01 ? CAB HEM 601 A 1 HETATM 21 C CBB HEM . . . B 2 -5.08 23.79 -27.69 1 20.65 ? CBB HEM 601 A 1 HETATM 22 C C1C HEM . . . B 2 0.571 24.744 -28.285 1 26.49 ? C1C HEM 601 A 1 HETATM 23 C C2C HEM . . . B 2 1.435 23.752 -28.512 1 28.4 ? C2C HEM 601 A 1 HETATM 24 C C3C HEM . . . B 2 2.713 24.431 -28.829 1 29.5 ? C3C HEM 601 A 1 HETATM 25 C C4C HEM . . . B 2 2.499 25.709 -28.506 1 28.81 ? C4C HEM 601 A 1 HETATM 26 C CMC HEM . . . B 2 1.081 22.367 -29 1 27.61 ? CMC HEM 601 A 1 HETATM 27 C CAC HEM . . . B 2 4.048 23.774 -29.074 1 32 ? CAC HEM 601 A 1 HETATM 28 C CBC HEM . . . B 2 4.254 22.753 -29.91 1 32.02 ? CBC HEM 601 A 1 HETATM 29 C C1D HEM . . . B 2 3.475 27.917 -28.042 1 29.41 ? C1D HEM 601 A 1 HETATM 30 C C2D HEM . . . B 2 4.57 28.879 -28.351 1 30.1 ? C2D HEM 601 A 1 HETATM 31 C C3D HEM . . . B 2 4.021 30.09 -28.31 1 30.55 ? C3D HEM 601 A 1 HETATM 32 C C4D HEM . . . B 2 2.58 29.898 -27.974 1 28.32 ? C4D HEM 601 A 1 HETATM 33 C CMD HEM . . . B 2 6.047 28.55 -28.368 1 27.64 ? CMD HEM 601 A 1 HETATM 34 C CAD HEM . . . B 2 4.738 31.419 -28.474 1 32 ? CAD HEM 601 A 1 HETATM 35 C CBD HEM . . . B 2 4.831 31.748 -29.968 1 33.88 ? CBD HEM 601 A 1 HETATM 36 C CGD HEM . . . B 2 5.579 33.043 -30.19 1 34.42 ? CGD HEM 601 A 1 HETATM 37 O O1D HEM . . . B 2 6.324 33.16 -31.146 1 34.07 ? O1D HEM 601 A 1 HETATM 38 O O2D HEM . . . B 2 5.435 34.066 -29.354 1 37.26 ? O2D HEM 601 A 1 HETATM 39 N NA HEM . . . B 2 -0.458 29.542 -27.567 1 23.35 ? NA HEM 601 A 1 HETATM 40 N NB HEM . . . B 2 -1.467 26.89 -27.635 1 16.49 ? NB HEM 601 A 1 HETATM 41 N NC HEM . . . B 2 1.166 25.939 -28.421 1 26.86 ? NC HEM 601 A 1 HETATM 42 N ND HEM . . . B 2 2.331 28.586 -27.916 1 27.52 ? ND HEM 601 A 1 HETATM 43 FE FE HEM . . . B 2 0.484 27.756 -27.773 1 26.24 ? FE HEM 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #