data_4EOX # _model_server_result.job_id lj56GaL4cTHOcDHaBh7tjQ _model_server_result.datetime_utc '2024-10-19 19:27:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eox # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4EOX # _exptl.entry_id 4EOX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EOX _cell.length_a 49.681 _cell.length_b 49.681 _cell.length_c 92.748 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EOX _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 130 P CYS 130 1_555 B NI NI . P NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc2 A NE2 HIS 173 P HIS 173 1_555 B NI NI . P NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc3 A NE2 HIS 177 P HIS 177 1_555 B NI NI . P NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc4 B NI NI . P NI 301 1_555 C O1 0S5 . P 0S5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc5 B NI NI . P NI 301 1_555 C O30 0S5 . P 0S5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EOX _atom_sites.fract_transf_matrix[1][1] 0.020128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI P 1 301 1 NI NI . C 3 0S5 P 1 302 219 0S5 UNL . D 4 HOH P 1 401 1 HOH HOH . D 4 HOH P 2 402 2 HOH HOH . D 4 HOH P 3 403 3 HOH HOH . D 4 HOH P 4 404 4 HOH HOH . D 4 HOH P 5 405 5 HOH HOH . D 4 HOH P 6 406 6 HOH HOH . D 4 HOH P 7 407 7 HOH HOH . D 4 HOH P 8 408 8 HOH HOH . D 4 HOH P 9 409 9 HOH HOH . D 4 HOH P 10 410 10 HOH HOH . D 4 HOH P 11 411 11 HOH HOH . D 4 HOH P 12 412 12 HOH HOH . D 4 HOH P 13 413 13 HOH HOH . D 4 HOH P 14 414 14 HOH HOH . D 4 HOH P 15 415 15 HOH HOH . D 4 HOH P 16 416 16 HOH HOH . D 4 HOH P 17 417 17 HOH HOH . D 4 HOH P 18 418 18 HOH HOH . D 4 HOH P 19 419 19 HOH HOH . D 4 HOH P 20 420 20 HOH HOH . D 4 HOH P 21 421 21 HOH HOH . D 4 HOH P 22 422 22 HOH HOH . D 4 HOH P 23 423 23 HOH HOH . D 4 HOH P 24 424 24 HOH HOH . D 4 HOH P 25 425 25 HOH HOH . D 4 HOH P 26 426 26 HOH HOH . D 4 HOH P 27 427 27 HOH HOH . D 4 HOH P 28 428 28 HOH HOH . D 4 HOH P 29 429 29 HOH HOH . D 4 HOH P 30 430 30 HOH HOH . D 4 HOH P 31 431 31 HOH HOH . D 4 HOH P 32 432 32 HOH HOH . D 4 HOH P 33 433 33 HOH HOH . D 4 HOH P 34 434 34 HOH HOH . D 4 HOH P 35 435 35 HOH HOH . D 4 HOH P 36 436 36 HOH HOH . D 4 HOH P 37 437 37 HOH HOH . D 4 HOH P 38 438 38 HOH HOH . D 4 HOH P 39 439 39 HOH HOH . D 4 HOH P 40 440 41 HOH HOH . D 4 HOH P 41 441 42 HOH HOH . D 4 HOH P 42 442 43 HOH HOH . D 4 HOH P 43 443 44 HOH HOH . D 4 HOH P 44 444 45 HOH HOH . D 4 HOH P 45 445 46 HOH HOH . D 4 HOH P 46 446 47 HOH HOH . D 4 HOH P 47 447 48 HOH HOH . D 4 HOH P 48 448 49 HOH HOH . D 4 HOH P 49 449 50 HOH HOH . D 4 HOH P 50 450 52 HOH HOH . D 4 HOH P 51 451 54 HOH HOH . D 4 HOH P 52 452 55 HOH HOH . D 4 HOH P 53 453 57 HOH HOH . D 4 HOH P 54 454 58 HOH HOH . D 4 HOH P 55 455 59 HOH HOH . D 4 HOH P 56 456 60 HOH HOH . D 4 HOH P 57 457 62 HOH HOH . D 4 HOH P 58 458 63 HOH HOH . D 4 HOH P 59 459 64 HOH HOH . D 4 HOH P 60 460 65 HOH HOH . D 4 HOH P 61 461 68 HOH HOH . D 4 HOH P 62 462 69 HOH HOH . D 4 HOH P 63 463 70 HOH HOH . D 4 HOH P 64 464 72 HOH HOH . D 4 HOH P 65 465 73 HOH HOH . D 4 HOH P 66 466 74 HOH HOH . D 4 HOH P 67 467 77 HOH HOH . D 4 HOH P 68 468 78 HOH HOH . D 4 HOH P 69 469 81 HOH HOH . D 4 HOH P 70 470 85 HOH HOH . D 4 HOH P 71 471 87 HOH HOH . D 4 HOH P 72 472 88 HOH HOH . D 4 HOH P 73 473 91 HOH HOH . D 4 HOH P 74 474 94 HOH HOH . D 4 HOH P 75 475 95 HOH HOH . D 4 HOH P 76 476 97 HOH HOH . D 4 HOH P 77 477 102 HOH HOH . D 4 HOH P 78 478 103 HOH HOH . D 4 HOH P 79 479 107 HOH HOH . D 4 HOH P 80 480 108 HOH HOH . D 4 HOH P 81 481 110 HOH HOH . D 4 HOH P 82 482 111 HOH HOH . D 4 HOH P 83 483 112 HOH HOH . D 4 HOH P 84 484 113 HOH HOH . D 4 HOH P 85 485 114 HOH HOH . D 4 HOH P 86 486 116 HOH HOH . D 4 HOH P 87 487 117 HOH HOH . D 4 HOH P 88 488 118 HOH HOH . D 4 HOH P 89 489 120 HOH HOH . D 4 HOH P 90 490 121 HOH HOH . D 4 HOH P 91 491 122 HOH HOH . D 4 HOH P 92 492 124 HOH HOH . D 4 HOH P 93 493 125 HOH HOH . D 4 HOH P 94 494 128 HOH HOH . D 4 HOH P 95 495 130 HOH HOH . D 4 HOH P 96 496 131 HOH HOH . D 4 HOH P 97 497 133 HOH HOH . D 4 HOH P 98 498 138 HOH HOH . D 4 HOH P 99 499 139 HOH HOH . D 4 HOH P 100 500 144 HOH HOH . D 4 HOH P 101 501 147 HOH HOH . D 4 HOH P 102 502 148 HOH HOH . D 4 HOH P 103 503 149 HOH HOH . D 4 HOH P 104 504 153 HOH HOH . D 4 HOH P 105 505 154 HOH HOH . D 4 HOH P 106 506 157 HOH HOH . D 4 HOH P 107 507 162 HOH HOH . D 4 HOH P 108 508 166 HOH HOH . D 4 HOH P 109 509 167 HOH HOH . D 4 HOH P 110 510 170 HOH HOH . D 4 HOH P 111 511 171 HOH HOH . D 4 HOH P 112 512 173 HOH HOH . D 4 HOH P 113 513 174 HOH HOH . D 4 HOH P 114 514 175 HOH HOH . D 4 HOH P 115 515 199 HOH HOH . D 4 HOH P 116 516 201 HOH HOH . D 4 HOH P 117 517 202 HOH HOH . D 4 HOH P 118 518 204 HOH HOH . D 4 HOH P 119 519 206 HOH HOH . D 4 HOH P 120 520 208 HOH HOH . D 4 HOH P 121 521 209 HOH HOH . D 4 HOH P 122 522 210 HOH HOH . D 4 HOH P 123 523 211 HOH HOH . D 4 HOH P 124 524 212 HOH HOH . D 4 HOH P 125 525 213 HOH HOH . D 4 HOH P 126 526 214 HOH HOH . D 4 HOH P 127 527 215 HOH HOH . D 4 HOH P 128 528 216 HOH HOH . D 4 HOH P 129 529 217 HOH HOH . D 4 HOH P 130 530 218 HOH HOH . D 4 HOH P 131 531 219 HOH HOH . D 4 HOH P 132 532 220 HOH HOH . D 4 HOH P 133 533 221 HOH HOH . D 4 HOH P 134 534 222 HOH HOH . D 4 HOH P 135 535 223 HOH HOH . D 4 HOH P 136 536 224 HOH HOH . D 4 HOH P 137 537 225 HOH HOH . D 4 HOH P 138 538 226 HOH HOH . D 4 HOH P 139 539 227 HOH HOH . D 4 HOH P 140 540 228 HOH HOH . D 4 HOH P 141 541 229 HOH HOH . D 4 HOH P 142 542 230 HOH HOH . D 4 HOH P 143 543 231 HOH HOH . D 4 HOH P 144 544 232 HOH HOH . D 4 HOH P 145 545 233 HOH HOH . D 4 HOH P 146 546 234 HOH HOH . D 4 HOH P 147 547 235 HOH HOH . D 4 HOH P 148 548 236 HOH HOH . D 4 HOH P 149 549 237 HOH HOH . D 4 HOH P 150 550 238 HOH HOH . D 4 HOH P 151 551 239 HOH HOH . D 4 HOH P 152 552 240 HOH HOH . D 4 HOH P 153 553 241 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.917 _atom_site.Cartn_y -3.595 _atom_site.Cartn_z 5.866 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 301 _atom_site.auth_asym_id P _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #