data_4EOX # _model_server_result.job_id 0n8IfrlmOEMrXoAB5AdMiQ _model_server_result.datetime_utc '2024-12-26 13:32:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eox # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4EOX # _exptl.entry_id 4EOX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 415.483 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-benzoyl-1-[(2R)-3-cyclopentyl-2-{[formyl(hydroxy)amino]methyl}propanoyl]-L-prolinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EOX _cell.length_a 49.681 _cell.length_b 49.681 _cell.length_c 92.748 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EOX _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 130 P CYS 130 1_555 B NI NI . P NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc2 A NE2 HIS 173 P HIS 173 1_555 B NI NI . P NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc3 A NE2 HIS 177 P HIS 177 1_555 B NI NI . P NI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc4 B NI NI . P NI 301 1_555 C O1 0S5 . P 0S5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc5 B NI NI . P NI 301 1_555 C O30 0S5 . P 0S5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'C22 H29 N3 O5' _chem_comp.formula_weight 415.483 _chem_comp.id 0S5 _chem_comp.mon_nstd_flag . _chem_comp.name N-benzoyl-1-[(2R)-3-cyclopentyl-2-{[formyl(hydroxy)amino]methyl}propanoyl]-L-prolinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C26 0S5 doub 1 n y C27 C28 0S5 sing 2 n y C26 C25 0S5 sing 3 n y C28 C23 0S5 doub 4 n y C25 C24 0S5 doub 5 n y C23 C24 0S5 sing 6 n y C23 C21 0S5 sing 7 n n C16 C17 0S5 sing 8 n n C16 C15 0S5 sing 9 n n N20 C21 0S5 sing 10 n n N20 C18 0S5 sing 11 n n C17 C18 0S5 sing 12 n n C17 N13 0S5 sing 13 n n C3 N2 0S5 sing 14 n n C3 C4 0S5 sing 15 n n C21 O22 0S5 doub 16 n n O12 C11 0S5 doub 17 n n C15 C14 0S5 sing 18 n n N2 O1 0S5 sing 19 n n N2 C29 0S5 sing 20 n n C18 O19 0S5 doub 21 n n N13 C11 0S5 sing 22 n n N13 C14 0S5 sing 23 n n C11 C4 0S5 sing 24 n n C29 O30 0S5 doub 25 n n C4 C5 0S5 sing 26 n n C5 C6 0S5 sing 27 n n C6 C7 0S5 sing 28 n n C6 C10 0S5 sing 29 n n C7 C8 0S5 sing 30 n n C10 C9 0S5 sing 31 n n C8 C9 0S5 sing 32 n n C26 H1 0S5 sing 33 n n C25 H2 0S5 sing 34 n n C27 H3 0S5 sing 35 n n C24 H4 0S5 sing 36 n n C28 H5 0S5 sing 37 n n C29 H6 0S5 sing 38 n n C8 H7 0S5 sing 39 n n C8 H8 0S5 sing 40 n n C9 H9 0S5 sing 41 n n C9 H10 0S5 sing 42 n n C15 H11 0S5 sing 43 n n C16 H12 0S5 sing 44 n n C16 H13 0S5 sing 45 n n C7 H14 0S5 sing 46 n n C7 H15 0S5 sing 47 n n C10 H16 0S5 sing 48 n n C10 H17 0S5 sing 49 n n C14 H18 0S5 sing 50 n n C17 H19 0S5 sing 51 n n C6 H20 0S5 sing 52 n n C5 H21 0S5 sing 53 n n C5 H22 0S5 sing 54 n n C3 H23 0S5 sing 55 n n C3 H24 0S5 sing 56 n n C4 H25 0S5 sing 57 n n N20 H26 0S5 sing 58 n n O1 H27 0S5 sing 59 n n C15 H28 0S5 sing 60 n n C14 H29 0S5 sing 61 n n # _atom_sites.entry_id 4EOX _atom_sites.fract_transf_matrix[1][1] 0.020128 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010782 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI P 1 301 1 NI NI . C 3 0S5 P 1 302 219 0S5 UNL . D 4 HOH P 1 401 1 HOH HOH . D 4 HOH P 2 402 2 HOH HOH . D 4 HOH P 3 403 3 HOH HOH . D 4 HOH P 4 404 4 HOH HOH . D 4 HOH P 5 405 5 HOH HOH . D 4 HOH P 6 406 6 HOH HOH . D 4 HOH P 7 407 7 HOH HOH . D 4 HOH P 8 408 8 HOH HOH . D 4 HOH P 9 409 9 HOH HOH . D 4 HOH P 10 410 10 HOH HOH . D 4 HOH P 11 411 11 HOH HOH . D 4 HOH P 12 412 12 HOH HOH . D 4 HOH P 13 413 13 HOH HOH . D 4 HOH P 14 414 14 HOH HOH . D 4 HOH P 15 415 15 HOH HOH . D 4 HOH P 16 416 16 HOH HOH . D 4 HOH P 17 417 17 HOH HOH . D 4 HOH P 18 418 18 HOH HOH . D 4 HOH P 19 419 19 HOH HOH . D 4 HOH P 20 420 20 HOH HOH . D 4 HOH P 21 421 21 HOH HOH . D 4 HOH P 22 422 22 HOH HOH . D 4 HOH P 23 423 23 HOH HOH . D 4 HOH P 24 424 24 HOH HOH . D 4 HOH P 25 425 25 HOH HOH . D 4 HOH P 26 426 26 HOH HOH . D 4 HOH P 27 427 27 HOH HOH . D 4 HOH P 28 428 28 HOH HOH . D 4 HOH P 29 429 29 HOH HOH . D 4 HOH P 30 430 30 HOH HOH . D 4 HOH P 31 431 31 HOH HOH . D 4 HOH P 32 432 32 HOH HOH . D 4 HOH P 33 433 33 HOH HOH . D 4 HOH P 34 434 34 HOH HOH . D 4 HOH P 35 435 35 HOH HOH . D 4 HOH P 36 436 36 HOH HOH . D 4 HOH P 37 437 37 HOH HOH . D 4 HOH P 38 438 38 HOH HOH . D 4 HOH P 39 439 39 HOH HOH . D 4 HOH P 40 440 41 HOH HOH . D 4 HOH P 41 441 42 HOH HOH . D 4 HOH P 42 442 43 HOH HOH . D 4 HOH P 43 443 44 HOH HOH . D 4 HOH P 44 444 45 HOH HOH . D 4 HOH P 45 445 46 HOH HOH . D 4 HOH P 46 446 47 HOH HOH . D 4 HOH P 47 447 48 HOH HOH . D 4 HOH P 48 448 49 HOH HOH . D 4 HOH P 49 449 50 HOH HOH . D 4 HOH P 50 450 52 HOH HOH . D 4 HOH P 51 451 54 HOH HOH . D 4 HOH P 52 452 55 HOH HOH . D 4 HOH P 53 453 57 HOH HOH . D 4 HOH P 54 454 58 HOH HOH . D 4 HOH P 55 455 59 HOH HOH . D 4 HOH P 56 456 60 HOH HOH . D 4 HOH P 57 457 62 HOH HOH . D 4 HOH P 58 458 63 HOH HOH . D 4 HOH P 59 459 64 HOH HOH . D 4 HOH P 60 460 65 HOH HOH . D 4 HOH P 61 461 68 HOH HOH . D 4 HOH P 62 462 69 HOH HOH . D 4 HOH P 63 463 70 HOH HOH . D 4 HOH P 64 464 72 HOH HOH . D 4 HOH P 65 465 73 HOH HOH . D 4 HOH P 66 466 74 HOH HOH . D 4 HOH P 67 467 77 HOH HOH . D 4 HOH P 68 468 78 HOH HOH . D 4 HOH P 69 469 81 HOH HOH . D 4 HOH P 70 470 85 HOH HOH . D 4 HOH P 71 471 87 HOH HOH . D 4 HOH P 72 472 88 HOH HOH . D 4 HOH P 73 473 91 HOH HOH . D 4 HOH P 74 474 94 HOH HOH . D 4 HOH P 75 475 95 HOH HOH . D 4 HOH P 76 476 97 HOH HOH . D 4 HOH P 77 477 102 HOH HOH . D 4 HOH P 78 478 103 HOH HOH . D 4 HOH P 79 479 107 HOH HOH . D 4 HOH P 80 480 108 HOH HOH . D 4 HOH P 81 481 110 HOH HOH . D 4 HOH P 82 482 111 HOH HOH . D 4 HOH P 83 483 112 HOH HOH . D 4 HOH P 84 484 113 HOH HOH . D 4 HOH P 85 485 114 HOH HOH . D 4 HOH P 86 486 116 HOH HOH . D 4 HOH P 87 487 117 HOH HOH . D 4 HOH P 88 488 118 HOH HOH . D 4 HOH P 89 489 120 HOH HOH . D 4 HOH P 90 490 121 HOH HOH . D 4 HOH P 91 491 122 HOH HOH . D 4 HOH P 92 492 124 HOH HOH . D 4 HOH P 93 493 125 HOH HOH . D 4 HOH P 94 494 128 HOH HOH . D 4 HOH P 95 495 130 HOH HOH . D 4 HOH P 96 496 131 HOH HOH . D 4 HOH P 97 497 133 HOH HOH . D 4 HOH P 98 498 138 HOH HOH . D 4 HOH P 99 499 139 HOH HOH . D 4 HOH P 100 500 144 HOH HOH . D 4 HOH P 101 501 147 HOH HOH . D 4 HOH P 102 502 148 HOH HOH . D 4 HOH P 103 503 149 HOH HOH . D 4 HOH P 104 504 153 HOH HOH . D 4 HOH P 105 505 154 HOH HOH . D 4 HOH P 106 506 157 HOH HOH . D 4 HOH P 107 507 162 HOH HOH . D 4 HOH P 108 508 166 HOH HOH . D 4 HOH P 109 509 167 HOH HOH . D 4 HOH P 110 510 170 HOH HOH . D 4 HOH P 111 511 171 HOH HOH . D 4 HOH P 112 512 173 HOH HOH . D 4 HOH P 113 513 174 HOH HOH . D 4 HOH P 114 514 175 HOH HOH . D 4 HOH P 115 515 199 HOH HOH . D 4 HOH P 116 516 201 HOH HOH . D 4 HOH P 117 517 202 HOH HOH . D 4 HOH P 118 518 204 HOH HOH . D 4 HOH P 119 519 206 HOH HOH . D 4 HOH P 120 520 208 HOH HOH . D 4 HOH P 121 521 209 HOH HOH . D 4 HOH P 122 522 210 HOH HOH . D 4 HOH P 123 523 211 HOH HOH . D 4 HOH P 124 524 212 HOH HOH . D 4 HOH P 125 525 213 HOH HOH . D 4 HOH P 126 526 214 HOH HOH . D 4 HOH P 127 527 215 HOH HOH . D 4 HOH P 128 528 216 HOH HOH . D 4 HOH P 129 529 217 HOH HOH . D 4 HOH P 130 530 218 HOH HOH . D 4 HOH P 131 531 219 HOH HOH . D 4 HOH P 132 532 220 HOH HOH . D 4 HOH P 133 533 221 HOH HOH . D 4 HOH P 134 534 222 HOH HOH . D 4 HOH P 135 535 223 HOH HOH . D 4 HOH P 136 536 224 HOH HOH . D 4 HOH P 137 537 225 HOH HOH . D 4 HOH P 138 538 226 HOH HOH . D 4 HOH P 139 539 227 HOH HOH . D 4 HOH P 140 540 228 HOH HOH . D 4 HOH P 141 541 229 HOH HOH . D 4 HOH P 142 542 230 HOH HOH . D 4 HOH P 143 543 231 HOH HOH . D 4 HOH P 144 544 232 HOH HOH . D 4 HOH P 145 545 233 HOH HOH . D 4 HOH P 146 546 234 HOH HOH . D 4 HOH P 147 547 235 HOH HOH . D 4 HOH P 148 548 236 HOH HOH . D 4 HOH P 149 549 237 HOH HOH . D 4 HOH P 150 550 238 HOH HOH . D 4 HOH P 151 551 239 HOH HOH . D 4 HOH P 152 552 240 HOH HOH . D 4 HOH P 153 553 241 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C26 0S5 . . . C 3 17.904 -6.38 1.169 1 29.72 ? C26 0S5 302 P 1 HETATM 2 C C25 0S5 . . . C 3 17.787 -5.625 2.322 1 28.39 ? C25 0S5 302 P 1 HETATM 3 C C27 0S5 . . . C 3 18.92 -7.305 1.005 1 30.21 ? C27 0S5 302 P 1 HETATM 4 C C24 0S5 . . . C 3 18.701 -5.812 3.338 1 27.46 ? C24 0S5 302 P 1 HETATM 5 C C28 0S5 . . . C 3 19.859 -7.488 1.996 1 29.58 ? C28 0S5 302 P 1 HETATM 6 C C23 0S5 . . . C 3 19.716 -6.723 3.147 1 28.09 ? C23 0S5 302 P 1 HETATM 7 C C29 0S5 . . . C 3 28.582 -2.197 4.843 1 19.23 ? C29 0S5 302 P 1 HETATM 8 C C21 0S5 . . . C 3 20.674 -6.849 4.243 1 30.58 ? C21 0S5 302 P 1 HETATM 9 C C18 0S5 . . . C 3 23.005 -7.309 4.613 1 24.75 ? C18 0S5 302 P 1 HETATM 10 C C11 0S5 . . . C 3 25.19 -5.304 4.757 1 17.71 ? C11 0S5 302 P 1 HETATM 11 C C8 0S5 . . . C 3 25.037 -5.564 9.481 1 31.09 ? C8 0S5 302 P 1 HETATM 12 C C9 0S5 . . . C 3 24.646 -4.152 9.89 1 26.6 ? C9 0S5 302 P 1 HETATM 13 C C15 0S5 . . . C 3 26.192 -8.77 4.405 1 27.2 ? C15 0S5 302 P 1 HETATM 14 C C16 0S5 . . . C 3 24.819 -8.794 3.778 1 25.1 ? C16 0S5 302 P 1 HETATM 15 C C7 0S5 . . . C 3 25.985 -5.432 8.278 1 26.15 ? C7 0S5 302 P 1 HETATM 16 C C10 0S5 . . . C 3 25.194 -3.232 8.818 1 22.6 ? C10 0S5 302 P 1 HETATM 17 C C14 0S5 . . . C 3 26.49 -7.393 4.955 1 20.97 ? C14 0S5 302 P 1 HETATM 18 C C17 0S5 . . . C 3 24.31 -7.366 3.859 1 20.06 ? C17 0S5 302 P 1 HETATM 19 C C6 0S5 . . . C 3 25.503 -4.186 7.647 1 19.11 ? C6 0S5 302 P 1 HETATM 20 C C5 0S5 . . . C 3 26.128 -3.558 6.433 1 18.55 ? C5 0S5 302 P 1 HETATM 21 C C3 0S5 . . . C 3 27.066 -4.04 4.194 1 17.76 ? C3 0S5 302 P 1 HETATM 22 C C4 0S5 . . . C 3 26.387 -4.678 5.384 1 17.61 ? C4 0S5 302 P 1 HETATM 23 N N13 0S5 . . . C 3 25.278 -6.679 4.663 1 21.45 ? N13 0S5 302 P 1 HETATM 24 N N20 0S5 . . . C 3 21.95 -7.026 3.786 1 23.67 ? N20 0S5 302 P 1 HETATM 25 N N2 0S5 . . . C 3 28.322 -3.477 4.52 1 19.75 ? N2 0S5 302 P 1 HETATM 26 O O30 0S5 . . . C 3 29.721 -1.861 5.122 1 16.15 ? O30 0S5 302 P 1 HETATM 27 O O22 0S5 . . . C 3 20.354 -6.678 5.407 1 33.2 ? O22 0S5 302 P 1 HETATM 28 O O19 0S5 . . . C 3 22.924 -7.464 5.825 1 24.6 ? O19 0S5 302 P 1 HETATM 29 O O12 0S5 . . . C 3 24.233 -4.709 4.295 1 18.54 ? O12 0S5 302 P 1 HETATM 30 O O1 0S5 . . . C 3 29.44 -4.317 4.669 1 19.17 ? O1 0S5 302 P 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #