data_4EP6
#
_model_server_result.job_id            aBExC_YpZra5wIS569djqA 
_model_server_result.datetime_utc      '2024-10-19 12:27:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ep6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    4EP6 
#
_exptl.entry_id    4EP6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4EP6 
_cell.length_a            136.12 
_cell.length_b            136.12 
_cell.length_c            75.13 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EP6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 343 A CYS 503 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N1 IMD . A IMD 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 292 n y 
N1 C5 IMD sing 293 n y 
N1 HN1 IMD sing 294 n n 
C2 N3 IMD doub 295 n y 
C2 H2 IMD sing 296 n n 
N3 C4 IMD sing 297 n y 
N3 HN3 IMD sing 298 n n 
C4 C5 IMD doub 299 n y 
C4 H4 IMD sing 300 n n 
C5 H5 IMD sing 301 n n 
#
_atom_sites.entry_id                     4EP6 
_atom_sites.fract_transf_matrix[1][1]    0.007346 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007346 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01331 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 1553 HEM HEM . 
C 3 IMD A 1 602 160 IMD IMD . 
D 4 1PE A 1 603 506 1PE 1PE . 
E 5 HOH A 1 701 2490 HOH HOH . 
E 5 HOH A 2 702 2543 HOH HOH . 
E 5 HOH A 3 703 2492 HOH HOH . 
E 5 HOH A 4 704 2624 HOH HOH . 
E 5 HOH A 5 705 2627 HOH HOH . 
E 5 HOH A 6 706 2656 HOH HOH . 
E 5 HOH A 7 707 2668 HOH HOH . 
E 5 HOH A 8 708 2678 HOH HOH . 
E 5 HOH A 9 709 2691 HOH HOH . 
E 5 HOH A 10 710 2698 HOH HOH . 
E 5 HOH A 11 711 2056 HOH HOH . 
E 5 HOH A 12 712 2345 HOH HOH . 
E 5 HOH A 13 713 2400 HOH HOH . 
E 5 HOH A 14 714 2491 HOH HOH . 
E 5 HOH A 15 715 2494 HOH HOH . 
E 5 HOH A 16 716 2486 HOH HOH . 
E 5 HOH A 17 717 2417 HOH HOH . 
E 5 HOH A 18 718 2158 HOH HOH . 
E 5 HOH A 19 719 2540 HOH HOH . 
E 5 HOH A 20 720 1 HOH HOH . 
E 5 HOH A 21 721 2 HOH HOH . 
E 5 HOH A 22 722 4 HOH HOH . 
E 5 HOH A 23 723 5 HOH HOH . 
E 5 HOH A 24 724 6 HOH HOH . 
E 5 HOH A 25 725 7 HOH HOH . 
E 5 HOH A 26 726 9 HOH HOH . 
E 5 HOH A 27 727 10 HOH HOH . 
E 5 HOH A 28 728 11 HOH HOH . 
E 5 HOH A 29 729 12 HOH HOH . 
E 5 HOH A 30 730 13 HOH HOH . 
E 5 HOH A 31 731 15 HOH HOH . 
E 5 HOH A 32 732 16 HOH HOH . 
E 5 HOH A 33 733 17 HOH HOH . 
E 5 HOH A 34 734 18 HOH HOH . 
E 5 HOH A 35 735 20 HOH HOH . 
E 5 HOH A 36 736 21 HOH HOH . 
E 5 HOH A 37 737 24 HOH HOH . 
E 5 HOH A 38 738 25 HOH HOH . 
E 5 HOH A 39 739 26 HOH HOH . 
E 5 HOH A 40 740 27 HOH HOH . 
E 5 HOH A 41 741 28 HOH HOH . 
E 5 HOH A 42 742 29 HOH HOH . 
E 5 HOH A 43 743 30 HOH HOH . 
E 5 HOH A 44 744 32 HOH HOH . 
E 5 HOH A 45 745 33 HOH HOH . 
E 5 HOH A 46 746 40 HOH HOH . 
E 5 HOH A 47 747 42 HOH HOH . 
E 5 HOH A 48 748 44 HOH HOH . 
E 5 HOH A 49 749 46 HOH HOH . 
E 5 HOH A 50 750 47 HOH HOH . 
E 5 HOH A 51 751 48 HOH HOH . 
E 5 HOH A 52 752 50 HOH HOH . 
E 5 HOH A 53 753 52 HOH HOH . 
E 5 HOH A 54 754 53 HOH HOH . 
E 5 HOH A 55 755 56 HOH HOH . 
E 5 HOH A 56 756 57 HOH HOH . 
E 5 HOH A 57 757 59 HOH HOH . 
E 5 HOH A 58 758 61 HOH HOH . 
E 5 HOH A 59 759 62 HOH HOH . 
E 5 HOH A 60 760 64 HOH HOH . 
E 5 HOH A 61 761 68 HOH HOH . 
E 5 HOH A 62 762 70 HOH HOH . 
E 5 HOH A 63 763 71 HOH HOH . 
E 5 HOH A 64 764 72 HOH HOH . 
E 5 HOH A 65 765 73 HOH HOH . 
E 5 HOH A 66 766 75 HOH HOH . 
E 5 HOH A 67 767 82 HOH HOH . 
E 5 HOH A 68 768 86 HOH HOH . 
E 5 HOH A 69 769 88 HOH HOH . 
E 5 HOH A 70 770 91 HOH HOH . 
E 5 HOH A 71 771 97 HOH HOH . 
E 5 HOH A 72 772 103 HOH HOH . 
E 5 HOH A 73 773 107 HOH HOH . 
E 5 HOH A 74 774 108 HOH HOH . 
E 5 HOH A 75 775 110 HOH HOH . 
E 5 HOH A 76 776 111 HOH HOH . 
E 5 HOH A 77 777 114 HOH HOH . 
E 5 HOH A 78 778 115 HOH HOH . 
E 5 HOH A 79 779 125 HOH HOH . 
E 5 HOH A 80 780 127 HOH HOH . 
E 5 HOH A 81 781 133 HOH HOH . 
E 5 HOH A 82 782 140 HOH HOH . 
E 5 HOH A 83 783 142 HOH HOH . 
E 5 HOH A 84 784 143 HOH HOH . 
E 5 HOH A 85 785 153 HOH HOH . 
E 5 HOH A 86 786 167 HOH HOH . 
E 5 HOH A 87 787 177 HOH HOH . 
E 5 HOH A 88 788 185 HOH HOH . 
E 5 HOH A 89 789 188 HOH HOH . 
E 5 HOH A 90 790 199 HOH HOH . 
E 5 HOH A 91 791 211 HOH HOH . 
E 5 HOH A 92 792 217 HOH HOH . 
E 5 HOH A 93 793 218 HOH HOH . 
E 5 HOH A 94 794 259 HOH HOH . 
E 5 HOH A 95 795 266 HOH HOH . 
E 5 HOH A 96 796 269 HOH HOH . 
E 5 HOH A 97 797 274 HOH HOH . 
E 5 HOH A 98 798 1 HOH HOH . 
E 5 HOH A 99 799 3 HOH HOH . 
E 5 HOH A 100 800 5 HOH HOH . 
E 5 HOH A 101 801 6 HOH HOH . 
E 5 HOH A 102 802 7 HOH HOH . 
E 5 HOH A 103 803 15 HOH HOH . 
E 5 HOH A 104 804 19 HOH HOH . 
E 5 HOH A 105 805 30 HOH HOH . 
E 5 HOH A 106 806 31 HOH HOH . 
E 5 HOH A 107 807 32 HOH HOH . 
E 5 HOH A 108 808 36 HOH HOH . 
E 5 HOH A 109 809 41 HOH HOH . 
E 5 HOH A 110 810 46 HOH HOH . 
E 5 HOH A 111 811 50 HOH HOH . 
E 5 HOH A 112 812 80 HOH HOH . 
E 5 HOH A 113 813 85 HOH HOH . 
E 5 HOH A 114 814 96 HOH HOH . 
E 5 HOH A 115 815 145 HOH HOH . 
E 5 HOH A 116 816 194 HOH HOH . 
E 5 HOH A 117 817 195 HOH HOH . 
E 5 HOH A 118 818 196 HOH HOH . 
E 5 HOH A 119 819 203 HOH HOH . 
E 5 HOH A 120 820 204 HOH HOH . 
E 5 HOH A 121 821 2 HOH HOH . 
E 5 HOH A 122 822 23 HOH HOH . 
E 5 HOH A 123 823 212 HOH HOH . 
E 5 HOH A 124 824 219 HOH HOH . 
E 5 HOH A 125 825 4 HOH HOH . 
E 5 HOH A 126 826 34 HOH HOH . 
E 5 HOH A 127 827 57 HOH HOH . 
E 5 HOH A 128 828 90 HOH HOH . 
E 5 HOH A 129 829 149 HOH HOH . 
E 5 HOH A 130 830 1 HOH HOH . 
E 5 HOH A 131 831 56 HOH HOH . 
E 5 HOH A 132 832 1 HOH HOH . 
E 5 HOH A 133 833 15 HOH HOH . 
E 5 HOH A 134 834 32 HOH HOH . 
E 5 HOH A 135 835 39 HOH HOH . 
E 5 HOH A 136 836 59 HOH HOH . 
E 5 HOH A 137 837 81 HOH HOH . 
E 5 HOH A 138 838 189 HOH HOH . 
E 5 HOH A 139 839 2338 HOH HOH . 
E 5 HOH A 140 840 2536 HOH HOH . 
E 5 HOH A 141 841 2576 HOH HOH . 
E 5 HOH A 142 842 2616 HOH HOH . 
E 5 HOH A 143 843 2628 HOH HOH . 
E 5 HOH A 144 844 2673 HOH HOH . 
E 5 HOH A 145 845 2418 HOH HOH . 
E 5 HOH A 146 846 2363 HOH HOH . 
E 5 HOH A 147 847 2127 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . C 3 4.99 19.987 5.87 1 33.5 ? N1 IMD 602 A 1 
HETATM 2 C C2 IMD . . . C 3 4.434 19.536 4.746 1 32.01 ? C2 IMD 602 A 1 
HETATM 3 N N3 IMD . . . C 3 4.154 18.254 4.949 1 32.74 ? N3 IMD 602 A 1 
HETATM 4 C C4 IMD . . . C 3 4.556 17.893 6.186 1 30.8 ? C4 IMD 602 A 1 
HETATM 5 C C5 IMD . . . C 3 5.11 18.98 6.765 1 30.92 ? C5 IMD 602 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           5 
#