data_4EPJ # _model_server_result.job_id C3f8txMM1wmzaZCzVOFU0w _model_server_result.datetime_utc '2024-11-22 09:08:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4epj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4EPJ # _exptl.entry_id 4EPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EPJ _cell.length_a 51.001 _cell.length_b 58.816 _cell.length_c 61.794 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 F N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 162 n n C1 C2 GOL sing 163 n n C1 H11 GOL sing 164 n n C1 H12 GOL sing 165 n n O1 HO1 GOL sing 166 n n C2 O2 GOL sing 167 n n C2 C3 GOL sing 168 n n C2 H2 GOL sing 169 n n O2 HO2 GOL sing 170 n n C3 O3 GOL sing 171 n n C3 H31 GOL sing 172 n n C3 H32 GOL sing 173 n n O3 HO3 GOL sing 174 n n # _atom_sites.entry_id 4EPJ _atom_sites.fract_transf_matrix[1][1] 0.019607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 201 1 GOL GOL . D 4 EDO A 1 202 1 EDO EDO . E 5 DMS A 1 203 1 DMS DMS . F 3 GOL A 1 204 1 GOL GOL . G 6 ACT A 1 205 1 ACT ACT . H 7 BME A 1 206 1 BME BME . I 8 HOH A 1 301 1 HOH HOH . I 8 HOH A 2 302 2 HOH HOH . I 8 HOH A 3 303 3 HOH HOH . I 8 HOH A 4 304 4 HOH HOH . I 8 HOH A 5 305 5 HOH HOH . I 8 HOH A 6 306 6 HOH HOH . I 8 HOH A 7 307 7 HOH HOH . I 8 HOH A 8 308 8 HOH HOH . I 8 HOH A 9 309 9 HOH HOH . I 8 HOH A 10 310 10 HOH HOH . I 8 HOH A 11 311 11 HOH HOH . I 8 HOH A 12 312 12 HOH HOH . I 8 HOH A 13 313 13 HOH HOH . I 8 HOH A 14 314 14 HOH HOH . I 8 HOH A 15 315 15 HOH HOH . I 8 HOH A 16 316 16 HOH HOH . I 8 HOH A 17 317 17 HOH HOH . I 8 HOH A 18 318 18 HOH HOH . I 8 HOH A 19 319 19 HOH HOH . I 8 HOH A 20 320 20 HOH HOH . I 8 HOH A 21 321 22 HOH HOH . I 8 HOH A 22 322 23 HOH HOH . I 8 HOH A 23 323 24 HOH HOH . I 8 HOH A 24 324 25 HOH HOH . I 8 HOH A 25 325 26 HOH HOH . I 8 HOH A 26 326 27 HOH HOH . I 8 HOH A 27 327 28 HOH HOH . I 8 HOH A 28 328 29 HOH HOH . I 8 HOH A 29 329 30 HOH HOH . I 8 HOH A 30 330 31 HOH HOH . I 8 HOH A 31 331 32 HOH HOH . I 8 HOH A 32 332 33 HOH HOH . I 8 HOH A 33 333 34 HOH HOH . I 8 HOH A 34 334 35 HOH HOH . I 8 HOH A 35 335 36 HOH HOH . I 8 HOH A 36 336 37 HOH HOH . I 8 HOH A 37 337 38 HOH HOH . I 8 HOH A 38 338 39 HOH HOH . I 8 HOH A 39 339 40 HOH HOH . I 8 HOH A 40 340 41 HOH HOH . I 8 HOH A 41 341 42 HOH HOH . I 8 HOH A 42 342 43 HOH HOH . I 8 HOH A 43 343 45 HOH HOH . I 8 HOH A 44 344 46 HOH HOH . I 8 HOH A 45 345 47 HOH HOH . I 8 HOH A 46 346 48 HOH HOH . I 8 HOH A 47 347 49 HOH HOH . I 8 HOH A 48 348 50 HOH HOH . I 8 HOH A 49 349 51 HOH HOH . I 8 HOH A 50 350 52 HOH HOH . I 8 HOH A 51 351 53 HOH HOH . I 8 HOH A 52 352 54 HOH HOH . I 8 HOH A 53 353 55 HOH HOH . I 8 HOH A 54 354 56 HOH HOH . I 8 HOH A 55 355 57 HOH HOH . I 8 HOH A 56 356 58 HOH HOH . I 8 HOH A 57 357 59 HOH HOH . I 8 HOH A 58 358 60 HOH HOH . I 8 HOH A 59 359 61 HOH HOH . I 8 HOH A 60 360 62 HOH HOH . I 8 HOH A 61 361 63 HOH HOH . I 8 HOH A 62 362 64 HOH HOH . I 8 HOH A 63 363 65 HOH HOH . I 8 HOH A 64 364 66 HOH HOH . I 8 HOH A 65 365 67 HOH HOH . I 8 HOH A 66 366 68 HOH HOH . I 8 HOH A 67 367 69 HOH HOH . J 8 HOH D 1 101 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 10.743 -5.746 26.118 1 52.56 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 3 11.379 -6.727 25.312 1 50.36 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 3 10.713 -6.232 27.564 1 55.62 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 3 9.392 -6.712 27.871 1 55.95 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 3 11.117 -5.107 28.518 1 56.13 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 3 11.69 -5.646 29.713 1 59.66 ? O3 GOL 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #