data_4EQK
#
_model_server_result.job_id            mN8ipQ_BtHPmM77LNhZ6vw 
_model_server_result.datetime_utc      '2024-11-08 15:32:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4eqk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    4EQK 
#
_exptl.entry_id    4EQK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              539.223 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4EQK 
_cell.length_a            55.379 
_cell.length_b            70.151 
_cell.length_c            93.941 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EQK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C11 H20 N5 O14 P3' 
_chem_comp.formula_weight    539.223 
_chem_comp.id                MGT 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G MGT doub 237 n n 
PG O2G MGT sing 238 n n 
PG O3G MGT sing 239 n n 
PG O3B MGT sing 240 n n 
O2G HOG2 MGT sing 241 n n 
O3G HOG3 MGT sing 242 n n 
O3B PB MGT sing 243 n n 
PB O1B MGT doub 244 n n 
PB O2B MGT sing 245 n n 
PB O3A MGT sing 246 n n 
O2B HOB2 MGT sing 247 n n 
O3A PA MGT sing 248 n n 
PA O1A MGT doub 249 n n 
PA O2A MGT sing 250 n n 
PA O5' MGT sing 251 n n 
O2A HOA2 MGT sing 252 n n 
O5' C5' MGT sing 253 n n 
C5' C4' MGT sing 254 n n 
C5' "H5'1" MGT sing 255 n n 
C5' "H5'2" MGT sing 256 n n 
C4' O4' MGT sing 257 n n 
C4' C3' MGT sing 258 n n 
C4' H4' MGT sing 259 n n 
O4' C1' MGT sing 260 n n 
C3' O3' MGT sing 261 n n 
C3' C2' MGT sing 262 n n 
C3' H3' MGT sing 263 n n 
O3' HO3' MGT sing 264 n n 
C2' O2' MGT sing 265 n n 
C2' C1' MGT sing 266 n n 
C2' H2' MGT sing 267 n n 
O2' HO2' MGT sing 268 n n 
C1' N9 MGT sing 269 n n 
C1' H1' MGT sing 270 n n 
N9 C8 MGT sing 271 n n 
N9 C4 MGT sing 272 n n 
C8 N7 MGT sing 273 n n 
C8 H81 MGT sing 274 n n 
C8 H82 MGT sing 275 n n 
N7 CM7 MGT sing 276 n n 
N7 C5 MGT sing 277 n n 
CM7 HM71 MGT sing 278 n n 
CM7 HM72 MGT sing 279 n n 
CM7 HM73 MGT sing 280 n n 
C5 C6 MGT sing 281 n n 
C5 C4 MGT doub 282 n n 
C6 O6 MGT doub 283 n n 
C6 N1 MGT sing 284 n n 
N1 C2 MGT sing 285 n n 
N1 HN1 MGT sing 286 n n 
C2 N2 MGT sing 287 n n 
C2 N3 MGT doub 288 n n 
N2 HN21 MGT sing 289 n n 
N2 HN22 MGT sing 290 n n 
N3 C4 MGT sing 291 n n 
#
_atom_sites.entry_id                     4EQK 
_atom_sites.fract_transf_matrix[1][1]    0.018057 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014255 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010645 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NO3 A 1 501 501 NO3 NO3 . 
C 3 MGT A 1 502 801 MGT MGT . 
D 4 HOH A 1 601 1 HOH HOH . 
D 4 HOH A 2 602 2 HOH HOH . 
D 4 HOH A 3 603 3 HOH HOH . 
D 4 HOH A 4 604 4 HOH HOH . 
D 4 HOH A 5 605 5 HOH HOH . 
D 4 HOH A 6 606 6 HOH HOH . 
D 4 HOH A 7 607 7 HOH HOH . 
D 4 HOH A 8 608 8 HOH HOH . 
D 4 HOH A 9 609 9 HOH HOH . 
D 4 HOH A 10 610 10 HOH HOH . 
D 4 HOH A 11 611 11 HOH HOH . 
D 4 HOH A 12 612 12 HOH HOH . 
D 4 HOH A 13 613 13 HOH HOH . 
D 4 HOH A 14 614 14 HOH HOH . 
D 4 HOH A 15 615 15 HOH HOH . 
D 4 HOH A 16 616 16 HOH HOH . 
D 4 HOH A 17 617 17 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 19 HOH HOH . 
D 4 HOH A 20 620 20 HOH HOH . 
D 4 HOH A 21 621 21 HOH HOH . 
D 4 HOH A 22 622 22 HOH HOH . 
D 4 HOH A 23 623 23 HOH HOH . 
D 4 HOH A 24 624 24 HOH HOH . 
D 4 HOH A 25 625 25 HOH HOH . 
D 4 HOH A 26 626 26 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 28 HOH HOH . 
D 4 HOH A 29 629 29 HOH HOH . 
D 4 HOH A 30 630 30 HOH HOH . 
D 4 HOH A 31 631 31 HOH HOH . 
D 4 HOH A 32 632 32 HOH HOH . 
D 4 HOH A 33 633 33 HOH HOH . 
D 4 HOH A 34 634 34 HOH HOH . 
D 4 HOH A 35 635 35 HOH HOH . 
D 4 HOH A 36 636 36 HOH HOH . 
D 4 HOH A 37 637 37 HOH HOH . 
D 4 HOH A 38 638 38 HOH HOH . 
D 4 HOH A 39 639 39 HOH HOH . 
D 4 HOH A 40 640 40 HOH HOH . 
D 4 HOH A 41 641 41 HOH HOH . 
D 4 HOH A 42 642 42 HOH HOH . 
D 4 HOH A 43 643 43 HOH HOH . 
D 4 HOH A 44 644 44 HOH HOH . 
D 4 HOH A 45 645 45 HOH HOH . 
D 4 HOH A 46 646 46 HOH HOH . 
D 4 HOH A 47 647 47 HOH HOH . 
D 4 HOH A 48 648 48 HOH HOH . 
D 4 HOH A 49 649 49 HOH HOH . 
D 4 HOH A 50 650 50 HOH HOH . 
D 4 HOH A 51 651 51 HOH HOH . 
D 4 HOH A 52 652 52 HOH HOH . 
D 4 HOH A 53 653 53 HOH HOH . 
D 4 HOH A 54 654 54 HOH HOH . 
D 4 HOH A 55 655 55 HOH HOH . 
D 4 HOH A 56 656 56 HOH HOH . 
D 4 HOH A 57 657 57 HOH HOH . 
D 4 HOH A 58 658 58 HOH HOH . 
D 4 HOH A 59 659 59 HOH HOH . 
D 4 HOH A 60 660 60 HOH HOH . 
D 4 HOH A 61 661 61 HOH HOH . 
D 4 HOH A 62 662 62 HOH HOH . 
D 4 HOH A 63 663 63 HOH HOH . 
D 4 HOH A 64 664 64 HOH HOH . 
D 4 HOH A 65 665 65 HOH HOH . 
D 4 HOH A 66 666 66 HOH HOH . 
D 4 HOH A 67 667 67 HOH HOH . 
D 4 HOH A 68 668 68 HOH HOH . 
D 4 HOH A 69 669 69 HOH HOH . 
D 4 HOH A 70 670 70 HOH HOH . 
D 4 HOH A 71 671 71 HOH HOH . 
D 4 HOH A 72 672 72 HOH HOH . 
D 4 HOH A 73 673 73 HOH HOH . 
D 4 HOH A 74 674 74 HOH HOH . 
D 4 HOH A 75 675 75 HOH HOH . 
D 4 HOH A 76 676 76 HOH HOH . 
D 4 HOH A 77 677 77 HOH HOH . 
D 4 HOH A 78 678 78 HOH HOH . 
D 4 HOH A 79 679 79 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG MGT . . . C 3 8.659 24.817 12.729 1 85.61 ? PG MGT 502 A 1 
HETATM 2 O O1G MGT . . . C 3 7.652 24.245 11.731 1 85.84 ? O1G MGT 502 A 1 
HETATM 3 O O2G MGT . . . C 3 8.868 26.326 12.748 1 84.02 ? O2G MGT 502 A 1 
HETATM 4 O O3G MGT . . . C 3 9.978 24.049 12.734 1 85.12 ? O3G MGT 502 A 1 
HETATM 5 O O3B MGT . . . C 3 7.838 24.578 14.118 1 80.36 ? O3B MGT 502 A 1 
HETATM 6 P PB MGT . . . C 3 7.6 23.113 14.74 1 76.71 ? PB MGT 502 A 1 
HETATM 7 O O1B MGT . . . C 3 6.59 22.265 13.954 1 77.43 ? O1B MGT 502 A 1 
HETATM 8 O O2B MGT . . . C 3 7.315 23.298 16.215 1 75.79 ? O2B MGT 502 A 1 
HETATM 9 O O3A MGT . . . C 3 9.127 22.645 14.41 1 72.65 ? O3A MGT 502 A 1 
HETATM 10 P PA MGT . . . C 3 10.099 21.571 15.165 1 66.08 ? PA MGT 502 A 1 
HETATM 11 O O1A MGT . . . C 3 10.535 20.661 14.049 1 66.65 ? O1A MGT 502 A 1 
HETATM 12 O O2A MGT . . . C 3 9.455 21.124 16.484 1 65.45 ? O2A MGT 502 A 1 
HETATM 13 O O5' MGT . . . C 3 11.425 22.457 15.523 1 61.25 ? O5' MGT 502 A 1 
HETATM 14 C C5' MGT . . . C 3 11.8 22.733 16.871 1 54.94 ? C5' MGT 502 A 1 
HETATM 15 C C4' MGT . . . C 3 12.117 24.22 17.045 1 49.47 ? C4' MGT 502 A 1 
HETATM 16 O O4' MGT . . . C 3 13.38 24.47 16.45 1 43.54 ? O4' MGT 502 A 1 
HETATM 17 C C3' MGT . . . C 3 11.139 25.187 16.371 1 49.9 ? C3' MGT 502 A 1 
HETATM 18 O O3' MGT . . . C 3 10.92 26.183 17.366 1 51.34 ? O3' MGT 502 A 1 
HETATM 19 C C2' MGT . . . C 3 11.909 25.786 15.197 1 47.07 ? C2' MGT 502 A 1 
HETATM 20 O O2' MGT . . . C 3 11.621 27.149 14.897 1 48.34 ? O2' MGT 502 A 1 
HETATM 21 C C1' MGT . . . C 3 13.28 25.746 15.831 1 44.55 ? C1' MGT 502 A 1 
HETATM 22 N N9 MGT . . . C 3 14.347 25.947 14.849 1 40.01 ? N9 MGT 502 A 1 
HETATM 23 C C8 MGT . . . C 3 14.573 24.878 13.897 1 39.93 ? C8 MGT 502 A 1 
HETATM 24 N N7 MGT . . . C 3 15.641 25.578 13.22 1 39.49 ? N7 MGT 502 A 1 
HETATM 25 C CM7 MGT . . . C 3 16.23 24.816 12.104 1 39.26 ? CM7 MGT 502 A 1 
HETATM 26 C C5 MGT . . . C 3 15.923 26.772 13.709 1 40.34 ? C5 MGT 502 A 1 
HETATM 27 C C6 MGT . . . C 3 16.899 27.777 13.352 1 41.28 ? C6 MGT 502 A 1 
HETATM 28 O O6 MGT . . . C 3 17.676 27.53 12.401 1 44.36 ? O6 MGT 502 A 1 
HETATM 29 N N1 MGT . . . C 3 16.895 28.912 14.108 1 42.74 ? N1 MGT 502 A 1 
HETATM 30 C C2 MGT . . . C 3 16.05 29.13 15.144 1 38.92 ? C2 MGT 502 A 1 
HETATM 31 N N2 MGT . . . C 3 16.122 30.288 15.829 1 34.78 ? N2 MGT 502 A 1 
HETATM 32 N N3 MGT . . . C 3 15.125 28.207 15.51 1 39.37 ? N3 MGT 502 A 1 
HETATM 33 C C4 MGT . . . C 3 15.036 27.05 14.811 1 39.19 ? C4 MGT 502 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           33 
#