data_4ER7 # _model_server_result.job_id aCSzi0pDHYplKqKWA3Iq8Q _model_server_result.datetime_utc '2024-11-27 21:31:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4er7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4ER7 # _exptl.entry_id 4ER7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 576.486 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4ER7 _cell.length_a 150.617 _cell.length_b 150.617 _cell.length_c 52.8 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ER7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H34 Br N7 O4' _chem_comp.formula_weight 576.486 _chem_comp.id AW3 _chem_comp.mon_nstd_flag . _chem_comp.name 5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]amino}propyl)amino]-5-deoxy-beta-D-ribofuranosyl}-7H-pyrrolo[2,3-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 AW3 doub 70 n y N1 C6 AW3 sing 71 n y C2 N3 AW3 sing 72 n y C2 H2 AW3 sing 73 n n N3 C4 AW3 doub 74 n y C5 C4 AW3 sing 75 n y C4 NBJ AW3 sing 76 n y C6 C5 AW3 doub 77 n y C5 CBB AW3 sing 78 n y NAD C6 AW3 sing 79 n n BRH CBB AW3 sing 80 n n CBK CAA AW3 sing 81 n n CAA HAA AW3 sing 82 n n CAA HAAA AW3 sing 83 n n CAA HAAB AW3 sing 84 n n CAB CBK AW3 sing 85 n n CAB HAB AW3 sing 86 n n CAB HABA AW3 sing 87 n n CAB HABB AW3 sing 88 n n CBK CAC AW3 sing 89 n n CAC HAC AW3 sing 90 n n CAC HACA AW3 sing 91 n n CAC HACB AW3 sing 92 n n NAD HNAD AW3 sing 93 n n NAD HNAA AW3 sing 94 n n CAY OAE AW3 doub 95 n n OAF CBF AW3 sing 96 n n OAF HOAF AW3 sing 97 n n OAG CBG AW3 sing 98 n n OAG HOAG AW3 sing 99 n n CBA CAJ AW3 doub 100 n y CAJ CAL AW3 sing 101 n y CAJ HAJ AW3 sing 102 n n CBA CAK AW3 sing 103 n y CAK CAM AW3 doub 104 n y CAK HAK AW3 sing 105 n n CAL CBC AW3 doub 106 n y CAL HAL AW3 sing 107 n n CAM CBC AW3 sing 108 n y CAM HAM AW3 sing 109 n n CBB CAN AW3 doub 110 n y NBJ CAN AW3 sing 111 n y CAN HAN AW3 sing 112 n n CAP CAO AW3 sing 113 n n CAO CAQ AW3 sing 114 n n CAO HAO AW3 sing 115 n n CAO HAOA AW3 sing 116 n n NAU CAP AW3 sing 117 n n CAP HAP AW3 sing 118 n n CAP HAPA AW3 sing 119 n n CAQ NAV AW3 sing 120 n n CAQ HAQ AW3 sing 121 n n CAQ HAQA AW3 sing 122 n n CBH CAR AW3 sing 123 n n CAR NAU AW3 sing 124 n n CAR HAR AW3 sing 125 n n CAR HARA AW3 sing 126 n n NAU HNAU AW3 sing 127 n n NAV CAY AW3 sing 128 n n NAV HNAV AW3 sing 129 n n CAY NAW AW3 sing 130 n n NAW CBA AW3 sing 131 n n NAW HNAW AW3 sing 132 n n CBI OAX AW3 sing 133 n n CBH OAX AW3 sing 134 n n CBC CBK AW3 sing 135 n n CBG CBF AW3 sing 136 n n CBF CBH AW3 sing 137 n n CBF HBF AW3 sing 138 n n CBG CBI AW3 sing 139 n n CBG HBG AW3 sing 140 n n CBH HBH AW3 sing 141 n n NBJ CBI AW3 sing 142 n n CBI HBI AW3 sing 143 n n # _atom_sites.entry_id 4ER7 _atom_sites.fract_transf_matrix[1][1] 0.006639 _atom_sites.fract_transf_matrix[1][2] 0.003833 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AW3 A 1 501 1 AW3 DRG . C 3 GOL A 1 502 1 GOL GOL . D 4 HOH A 1 601 2 HOH HOH . D 4 HOH A 2 602 3 HOH HOH . D 4 HOH A 3 603 4 HOH HOH . D 4 HOH A 4 604 6 HOH HOH . D 4 HOH A 5 605 7 HOH HOH . D 4 HOH A 6 606 8 HOH HOH . D 4 HOH A 7 607 9 HOH HOH . D 4 HOH A 8 608 10 HOH HOH . D 4 HOH A 9 609 11 HOH HOH . D 4 HOH A 10 610 12 HOH HOH . D 4 HOH A 11 611 13 HOH HOH . D 4 HOH A 12 612 14 HOH HOH . D 4 HOH A 13 613 15 HOH HOH . D 4 HOH A 14 614 16 HOH HOH . D 4 HOH A 15 615 17 HOH HOH . D 4 HOH A 16 616 18 HOH HOH . D 4 HOH A 17 617 19 HOH HOH . D 4 HOH A 18 618 20 HOH HOH . D 4 HOH A 19 619 21 HOH HOH . D 4 HOH A 20 620 22 HOH HOH . D 4 HOH A 21 621 24 HOH HOH . D 4 HOH A 22 622 25 HOH HOH . D 4 HOH A 23 623 26 HOH HOH . D 4 HOH A 24 624 27 HOH HOH . D 4 HOH A 25 625 30 HOH HOH . D 4 HOH A 26 626 31 HOH HOH . D 4 HOH A 27 627 32 HOH HOH . D 4 HOH A 28 628 33 HOH HOH . D 4 HOH A 29 629 35 HOH HOH . D 4 HOH A 30 630 36 HOH HOH . D 4 HOH A 31 631 37 HOH HOH . D 4 HOH A 32 632 38 HOH HOH . D 4 HOH A 33 633 39 HOH HOH . D 4 HOH A 34 634 40 HOH HOH . D 4 HOH A 35 635 41 HOH HOH . D 4 HOH A 36 636 42 HOH HOH . D 4 HOH A 37 637 43 HOH HOH . D 4 HOH A 38 638 44 HOH HOH . D 4 HOH A 39 639 45 HOH HOH . D 4 HOH A 40 640 46 HOH HOH . D 4 HOH A 41 641 47 HOH HOH . D 4 HOH A 42 642 48 HOH HOH . D 4 HOH A 43 643 49 HOH HOH . D 4 HOH A 44 644 50 HOH HOH . D 4 HOH A 45 645 51 HOH HOH . D 4 HOH A 46 646 52 HOH HOH . D 4 HOH A 47 647 53 HOH HOH . D 4 HOH A 48 648 54 HOH HOH . D 4 HOH A 49 649 55 HOH HOH . D 4 HOH A 50 650 56 HOH HOH . D 4 HOH A 51 651 57 HOH HOH . D 4 HOH A 52 652 58 HOH HOH . D 4 HOH A 53 653 59 HOH HOH . D 4 HOH A 54 654 61 HOH HOH . D 4 HOH A 55 655 62 HOH HOH . D 4 HOH A 56 656 63 HOH HOH . D 4 HOH A 57 657 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AW3 . A . B 2 15.094 60.157 -10.008 0.7 47.44 ? N1 AW3 501 A 1 HETATM 2 N N1 AW3 . B . B 2 15.304 64.815 -10.817 0.3 53.61 ? N1 AW3 501 A 1 HETATM 3 C C2 AW3 . A . B 2 16.34 59.536 -9.788 0.7 44.25 ? C2 AW3 501 A 1 HETATM 4 C C2 AW3 . B . B 2 16.571 65.384 -10.656 0.3 53 ? C2 AW3 501 A 1 HETATM 5 N N3 AW3 . A . B 2 17.45 60.34 -9.639 0.7 43 ? N3 AW3 501 A 1 HETATM 6 N N3 AW3 . B . B 2 17.627 64.551 -10.253 0.3 52.32 ? N3 AW3 501 A 1 HETATM 7 C C4 AW3 . A . B 2 17.317 61.669 -9.693 0.7 46.66 ? C4 AW3 501 A 1 HETATM 8 C C4 AW3 . B . B 2 17.402 63.246 -10.032 0.3 52.16 ? C4 AW3 501 A 1 HETATM 9 C C5 AW3 . A . B 2 16.125 62.248 -9.899 0.7 47.42 ? C5 AW3 501 A 1 HETATM 10 C C5 AW3 . B . B 2 16.178 62.735 -10.195 0.3 52.88 ? C5 AW3 501 A 1 HETATM 11 C C6 AW3 . A . B 2 15.039 61.502 -10.064 0.7 46.32 ? C6 AW3 501 A 1 HETATM 12 C C6 AW3 . B . B 2 15.154 63.501 -10.578 0.3 52.86 ? C6 AW3 501 A 1 HETATM 13 BR BRH AW3 . A . B 2 15.007 64.947 -10.113 0.5 54.9 ? BRH AW3 501 A 1 HETATM 14 BR BRH AW3 . B . B 2 14.82 60.235 -9.976 0.2 56.52 ? BRH AW3 501 A 1 HETATM 15 C CAA AW3 . A . B 2 22.958 66.535 4.539 0.7 35.09 ? CAA AW3 501 A 1 HETATM 16 C CAA AW3 . B . B 2 22.94 66.765 3.761 0.3 40.34 ? CAA AW3 501 A 1 HETATM 17 C CAB AW3 . A . B 2 20.515 66.51 3.948 0.7 37.32 ? CAB AW3 501 A 1 HETATM 18 C CAB AW3 . B . B 2 20.472 66.31 3.606 0.3 41.13 ? CAB AW3 501 A 1 HETATM 19 C CAC AW3 . A . B 2 21.581 64.64 5.206 0.7 33.6 ? CAC AW3 501 A 1 HETATM 20 C CAC AW3 . B . B 2 21.946 64.855 5.013 0.3 39.42 ? CAC AW3 501 A 1 HETATM 21 N NAD AW3 . A . B 2 13.905 62.155 -10.269 0.7 46.63 ? NAD AW3 501 A 1 HETATM 22 N NAD AW3 . B . B 2 13.98 62.899 -10.715 0.3 52.04 ? NAD AW3 501 A 1 HETATM 23 O OAE AW3 . A . B 2 24.242 63.947 -1.602 0.7 36.88 ? OAE AW3 501 A 1 HETATM 24 O OAE AW3 . B . B 2 23.896 64.186 -1.492 0.3 43.34 ? OAE AW3 501 A 1 HETATM 25 O OAF AW3 . A . B 2 22.66 62.11 -9.887 0.7 47.86 ? OAF AW3 501 A 1 HETATM 26 O OAF AW3 . B . B 2 22.807 62.879 -10.038 0.3 50.36 ? OAF AW3 501 A 1 HETATM 27 O OAG AW3 . A . B 2 20.667 62.483 -11.52 0.7 47.29 ? OAG AW3 501 A 1 HETATM 28 O OAG AW3 . B . B 2 20.754 62.426 -11.522 0.3 50.25 ? OAG AW3 501 A 1 HETATM 29 C CAJ AW3 . A . B 2 23.566 64.182 1.1 0.7 37.65 ? CAJ AW3 501 A 1 HETATM 30 C CAJ AW3 . B . B 2 23.572 64.018 0.907 0.3 41.59 ? CAJ AW3 501 A 1 HETATM 31 C CAK AW3 . A . B 2 21.289 63.436 1.168 0.7 37.59 ? CAK AW3 501 A 1 HETATM 32 C CAK AW3 . B . B 2 21.3 63.239 1.018 0.3 41.76 ? CAK AW3 501 A 1 HETATM 33 C CAL AW3 . A . B 2 23.349 64.927 2.269 0.7 37.52 ? CAL AW3 501 A 1 HETATM 34 C CAL AW3 . B . B 2 23.344 64.833 2.012 0.3 41.46 ? CAL AW3 501 A 1 HETATM 35 C CAM AW3 . A . B 2 21.069 64.171 2.324 0.7 35.93 ? CAM AW3 501 A 1 HETATM 36 C CAM AW3 . B . B 2 21.071 64.055 2.12 0.3 40.88 ? CAM AW3 501 A 1 HETATM 37 C CAN AW3 . A . B 2 17.605 63.817 -9.686 0.7 47.45 ? CAN AW3 501 A 1 HETATM 38 C CAN AW3 . B . B 2 17.512 61.129 -9.574 0.3 52.39 ? CAN AW3 501 A 1 HETATM 39 C CAO AW3 . A . B 2 24.32 63.61 -4.468 0.7 48.13 ? CAO AW3 501 A 1 HETATM 40 C CAO AW3 . B . B 2 23.919 62.834 -5.116 0.3 46.83 ? CAO AW3 501 A 1 HETATM 41 C CAP AW3 . A . B 2 22.902 64.121 -4.746 0.7 47.55 ? CAP AW3 501 A 1 HETATM 42 C CAP AW3 . B . B 2 23.254 64.198 -5.426 0.3 47 ? CAP AW3 501 A 1 HETATM 43 C CAQ AW3 . A . B 2 24.314 62.194 -3.816 0.7 45.09 ? CAQ AW3 501 A 1 HETATM 44 C CAQ AW3 . B . B 2 24.512 63.106 -3.75 0.3 46.75 ? CAQ AW3 501 A 1 HETATM 45 C CAR AW3 . A . B 2 21.995 64.114 -7.067 0.7 49.22 ? CAR AW3 501 A 1 HETATM 46 C CAR AW3 . B . B 2 21.748 64.554 -7.276 0.3 48.82 ? CAR AW3 501 A 1 HETATM 47 N NAU AW3 . A . B 2 22.289 63.361 -5.825 0.7 49.34 ? NAU AW3 501 A 1 HETATM 48 N NAU AW3 . B . B 2 21.855 64.123 -5.871 0.3 48.11 ? NAU AW3 501 A 1 HETATM 49 N NAV AW3 . A . B 2 23.465 62.1 -2.625 0.7 41.62 ? NAV AW3 501 A 1 HETATM 50 N NAV AW3 . B . B 2 23.783 62.362 -2.738 0.3 45.05 ? NAV AW3 501 A 1 HETATM 51 N NAW AW3 . A . B 2 22.636 62.674 -0.586 0.7 38.55 ? NAW AW3 501 A 1 HETATM 52 N NAW AW3 . B . B 2 22.776 62.443 -0.654 0.3 42.92 ? NAW AW3 501 A 1 HETATM 53 O OAX AW3 . A . B 2 19.99 63.091 -8.072 0.7 47.81 ? OAX AW3 501 A 1 HETATM 54 O OAX AW3 . B . B 2 19.935 63.102 -8.123 0.3 50.08 ? OAX AW3 501 A 1 HETATM 55 C CAY AW3 . A . B 2 23.492 62.963 -1.6 0.7 39.37 ? CAY AW3 501 A 1 HETATM 56 C CAY AW3 . B . B 2 23.485 63.032 -1.625 0.3 43.78 ? CAY AW3 501 A 1 HETATM 57 C CBA AW3 . A . B 2 22.529 63.432 0.529 0.7 37.56 ? CBA AW3 501 A 1 HETATM 58 C CBA AW3 . B . B 2 22.553 63.211 0.414 0.3 41.95 ? CBA AW3 501 A 1 HETATM 59 C CBB AW3 . A . B 2 16.325 63.567 -9.883 0.7 48.72 ? CBB AW3 501 A 1 HETATM 60 C CBB AW3 . B . B 2 16.269 61.442 -9.914 0.3 53.15 ? CBB AW3 501 A 1 HETATM 61 C CBC AW3 . A . B 2 22.089 64.934 2.897 0.7 35.93 ? CBC AW3 501 A 1 HETATM 62 C CBC AW3 . B . B 2 22.093 64.852 2.62 0.3 40.72 ? CBC AW3 501 A 1 HETATM 63 C CBF AW3 . A . B 2 21.877 63.256 -9.51 0.7 48 ? CBF AW3 501 A 1 HETATM 64 C CBF AW3 . B . B 2 21.679 63.658 -9.622 0.3 50.09 ? CBF AW3 501 A 1 HETATM 65 C CBG AW3 . A . B 2 20.556 63.227 -10.285 0.7 47.92 ? CBG AW3 501 A 1 HETATM 66 C CBG AW3 . B . B 2 20.419 63.228 -10.376 0.3 50.42 ? CBG AW3 501 A 1 HETATM 67 C CBH AW3 . A . B 2 21.435 63.063 -8.059 0.7 48.38 ? CBH AW3 501 A 1 HETATM 68 C CBH AW3 . B . B 2 21.364 63.358 -8.161 0.3 49.63 ? CBH AW3 501 A 1 HETATM 69 C CBI AW3 . A . B 2 19.659 62.466 -9.314 0.7 47.61 ? CBI AW3 501 A 1 HETATM 70 C CBI AW3 . B . B 2 19.674 62.385 -9.349 0.3 50.72 ? CBI AW3 501 A 1 HETATM 71 N NBJ AW3 . A . B 2 18.22 62.64 -9.571 0.7 48.15 ? NBJ AW3 501 A 1 HETATM 72 N NBJ AW3 . B . B 2 18.22 62.257 -9.652 0.3 51.87 ? NBJ AW3 501 A 1 HETATM 73 C CBK AW3 . A . B 2 21.813 65.646 4.099 0.7 35.96 ? CBK AW3 501 A 1 HETATM 74 C CBK AW3 . B . B 2 21.871 65.671 3.725 0.3 40.69 ? CBK AW3 501 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 74 #