data_4ERA # _model_server_result.job_id HyuZXr7mcyK7w1HjM1xlAQ _model_server_result.datetime_utc '2024-11-09 02:35:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4era # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 4ERA # _exptl.entry_id 4ERA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ERA _cell.length_a 90.033 _cell.length_b 90.033 _cell.length_c 167.314 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ERA _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 9 A HIS 9 1_555 C CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc2 A NE2 HIS 11 A HIS 11 1_555 C CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? metalc ? metalc3 A NE2 HIS 177 A HIS 177 1_555 C CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc4 A OH TYR 228 A TYR 228 1_555 C CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc5 A OD2 ASP 294 A ASP 294 1_555 C CO CO . A CO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc6 B NE2 HIS 9 B HIS 9 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc7 B NE2 HIS 11 B HIS 11 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc8 B NE2 HIS 177 B HIS 177 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc9 B OH TYR 228 B TYR 228 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc10 B OD1 ASP 294 B ASP 294 1_555 D CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ERA _atom_sites.fract_transf_matrix[1][1] 0.011107 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011107 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005977 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 501 501 CO CO . D 2 CO B 1 401 401 CO CO . E 3 HOH A 1 601 1 HOH HOH . E 3 HOH A 2 602 2 HOH HOH . E 3 HOH A 3 603 4 HOH HOH . E 3 HOH A 4 604 5 HOH HOH . E 3 HOH A 5 605 6 HOH HOH . E 3 HOH A 6 606 11 HOH HOH . E 3 HOH A 7 607 12 HOH HOH . E 3 HOH A 8 608 13 HOH HOH . E 3 HOH A 9 609 16 HOH HOH . E 3 HOH A 10 610 19 HOH HOH . E 3 HOH A 11 611 20 HOH HOH . E 3 HOH A 12 612 21 HOH HOH . E 3 HOH A 13 613 27 HOH HOH . E 3 HOH A 14 614 29 HOH HOH . E 3 HOH A 15 615 32 HOH HOH . E 3 HOH A 16 616 33 HOH HOH . E 3 HOH A 17 617 34 HOH HOH . E 3 HOH A 18 618 37 HOH HOH . E 3 HOH A 19 619 38 HOH HOH . E 3 HOH A 20 620 41 HOH HOH . E 3 HOH A 21 621 44 HOH HOH . E 3 HOH A 22 622 46 HOH HOH . E 3 HOH A 23 623 49 HOH HOH . E 3 HOH A 24 624 53 HOH HOH . E 3 HOH A 25 625 54 HOH HOH . E 3 HOH A 26 626 59 HOH HOH . E 3 HOH A 27 627 65 HOH HOH . E 3 HOH A 28 628 70 HOH HOH . E 3 HOH A 29 629 71 HOH HOH . E 3 HOH A 30 630 74 HOH HOH . E 3 HOH A 31 631 79 HOH HOH . E 3 HOH A 32 632 93 HOH HOH . E 3 HOH A 33 633 95 HOH HOH . E 3 HOH A 34 634 96 HOH HOH . E 3 HOH A 35 635 97 HOH HOH . E 3 HOH A 36 636 99 HOH HOH . E 3 HOH A 37 637 114 HOH HOH . E 3 HOH A 38 638 116 HOH HOH . E 3 HOH A 39 639 130 HOH HOH . E 3 HOH A 40 640 131 HOH HOH . E 3 HOH A 41 641 142 HOH HOH . E 3 HOH A 42 642 149 HOH HOH . E 3 HOH A 43 643 151 HOH HOH . E 3 HOH A 44 644 173 HOH HOH . E 3 HOH A 45 645 193 HOH HOH . E 3 HOH A 46 646 199 HOH HOH . E 3 HOH A 47 647 203 HOH HOH . E 3 HOH A 48 648 205 HOH HOH . E 3 HOH A 49 649 210 HOH HOH . E 3 HOH A 50 650 211 HOH HOH . E 3 HOH A 51 651 220 HOH HOH . E 3 HOH A 52 652 222 HOH HOH . E 3 HOH A 53 653 2 HOH HOH . E 3 HOH A 54 654 6 HOH HOH . E 3 HOH A 55 655 9 HOH HOH . E 3 HOH A 56 656 93 HOH HOH . F 3 HOH B 1 501 3 HOH HOH . F 3 HOH B 2 502 9 HOH HOH . F 3 HOH B 3 503 10 HOH HOH . F 3 HOH B 4 504 14 HOH HOH . F 3 HOH B 5 505 18 HOH HOH . F 3 HOH B 6 506 23 HOH HOH . F 3 HOH B 7 507 24 HOH HOH . F 3 HOH B 8 508 26 HOH HOH . F 3 HOH B 9 509 28 HOH HOH . F 3 HOH B 10 510 31 HOH HOH . F 3 HOH B 11 511 36 HOH HOH . F 3 HOH B 12 512 43 HOH HOH . F 3 HOH B 13 513 45 HOH HOH . F 3 HOH B 14 514 50 HOH HOH . F 3 HOH B 15 515 57 HOH HOH . F 3 HOH B 16 516 75 HOH HOH . F 3 HOH B 17 517 78 HOH HOH . F 3 HOH B 18 518 113 HOH HOH . F 3 HOH B 19 519 139 HOH HOH . F 3 HOH B 20 520 144 HOH HOH . F 3 HOH B 21 521 154 HOH HOH . F 3 HOH B 22 522 161 HOH HOH . F 3 HOH B 23 523 174 HOH HOH . F 3 HOH B 24 524 188 HOH HOH . F 3 HOH B 25 525 219 HOH HOH . F 3 HOH B 26 526 221 HOH HOH . F 3 HOH B 27 527 223 HOH HOH . F 3 HOH B 28 528 4 HOH HOH . F 3 HOH B 29 529 24 HOH HOH . F 3 HOH B 30 530 26 HOH HOH . F 3 HOH B 31 531 38 HOH HOH . F 3 HOH B 32 532 41 HOH HOH . F 3 HOH B 33 533 43 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.877 _atom_site.Cartn_y -28.858 _atom_site.Cartn_z 22.738 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #