data_4ERI # _model_server_result.job_id KxlGP7jOlRrkx2xXt71Qpw _model_server_result.datetime_utc '2025-02-05 11:44:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4ERI # _exptl.entry_id 4ERI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.89 _cell.angle_gamma 90 _cell.entry_id 4ERI _cell.length_a 153.836 _cell.length_b 48.561 _cell.length_c 110.201 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ERI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 9 A HIS 9 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc2 A NE2 HIS 11 A HIS 11 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc3 A NE2 HIS 177 A HIS 177 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc4 A OH TYR 228 A TYR 228 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc5 A OD2 ASP 294 A ASP 294 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc6 C ZN ZN . A ZN 401 1_555 F O HOH . A HOH 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc7 D MG MG . A MG 402 1_555 F O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? metalc ? metalc8 B NE2 HIS 9 B HIS 9 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc9 B NE2 HIS 11 B HIS 11 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc10 B NE2 HIS 177 B HIS 177 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc11 B OH TYR 228 B TYR 228 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc12 B OD2 ASP 294 B ASP 294 1_555 E ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc13 E ZN ZN . B ZN 401 1_555 G O HOH . B HOH 545 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ERI _atom_sites.fract_transf_matrix[1][1] 0.0065 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00488 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020593 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 1 ZN ZN . D 3 MG A 1 402 1 MG MG . E 2 ZN B 1 401 2 ZN ZN . F 4 HOH A 1 501 1 HOH HOH . F 4 HOH A 2 502 2 HOH HOH . F 4 HOH A 3 503 3 HOH HOH . F 4 HOH A 4 504 4 HOH HOH . F 4 HOH A 5 505 5 HOH HOH . F 4 HOH A 6 506 6 HOH HOH . F 4 HOH A 7 507 7 HOH HOH . F 4 HOH A 8 508 8 HOH HOH . F 4 HOH A 9 509 9 HOH HOH . F 4 HOH A 10 510 10 HOH HOH . F 4 HOH A 11 511 11 HOH HOH . F 4 HOH A 12 512 12 HOH HOH . F 4 HOH A 13 513 13 HOH HOH . F 4 HOH A 14 514 14 HOH HOH . F 4 HOH A 15 515 16 HOH HOH . F 4 HOH A 16 516 18 HOH HOH . F 4 HOH A 17 517 20 HOH HOH . F 4 HOH A 18 518 22 HOH HOH . F 4 HOH A 19 519 25 HOH HOH . F 4 HOH A 20 520 26 HOH HOH . F 4 HOH A 21 521 27 HOH HOH . F 4 HOH A 22 522 30 HOH HOH . F 4 HOH A 23 523 31 HOH HOH . F 4 HOH A 24 524 32 HOH HOH . F 4 HOH A 25 525 33 HOH HOH . F 4 HOH A 26 526 34 HOH HOH . F 4 HOH A 27 527 37 HOH HOH . F 4 HOH A 28 528 38 HOH HOH . F 4 HOH A 29 529 40 HOH HOH . F 4 HOH A 30 530 41 HOH HOH . F 4 HOH A 31 531 42 HOH HOH . F 4 HOH A 32 532 43 HOH HOH . F 4 HOH A 33 533 45 HOH HOH . F 4 HOH A 34 534 46 HOH HOH . F 4 HOH A 35 535 47 HOH HOH . F 4 HOH A 36 536 48 HOH HOH . F 4 HOH A 37 537 50 HOH HOH . F 4 HOH A 38 538 51 HOH HOH . F 4 HOH A 39 539 52 HOH HOH . F 4 HOH A 40 540 54 HOH HOH . F 4 HOH A 41 541 55 HOH HOH . F 4 HOH A 42 542 59 HOH HOH . F 4 HOH A 43 543 60 HOH HOH . F 4 HOH A 44 544 61 HOH HOH . F 4 HOH A 45 545 62 HOH HOH . F 4 HOH A 46 546 63 HOH HOH . F 4 HOH A 47 547 65 HOH HOH . F 4 HOH A 48 548 66 HOH HOH . F 4 HOH A 49 549 68 HOH HOH . F 4 HOH A 50 550 69 HOH HOH . F 4 HOH A 51 551 70 HOH HOH . F 4 HOH A 52 552 71 HOH HOH . F 4 HOH A 53 553 72 HOH HOH . F 4 HOH A 54 554 73 HOH HOH . F 4 HOH A 55 555 75 HOH HOH . F 4 HOH A 56 556 77 HOH HOH . F 4 HOH A 57 557 81 HOH HOH . F 4 HOH A 58 558 83 HOH HOH . F 4 HOH A 59 559 85 HOH HOH . F 4 HOH A 60 560 86 HOH HOH . F 4 HOH A 61 561 87 HOH HOH . F 4 HOH A 62 562 89 HOH HOH . F 4 HOH A 63 563 91 HOH HOH . F 4 HOH A 64 564 92 HOH HOH . F 4 HOH A 65 565 93 HOH HOH . F 4 HOH A 66 566 94 HOH HOH . F 4 HOH A 67 567 95 HOH HOH . F 4 HOH A 68 568 96 HOH HOH . F 4 HOH A 69 569 97 HOH HOH . F 4 HOH A 70 570 98 HOH HOH . F 4 HOH A 71 571 99 HOH HOH . F 4 HOH A 72 572 102 HOH HOH . F 4 HOH A 73 573 103 HOH HOH . F 4 HOH A 74 574 104 HOH HOH . F 4 HOH A 75 575 105 HOH HOH . F 4 HOH A 76 576 107 HOH HOH . F 4 HOH A 77 577 108 HOH HOH . F 4 HOH A 78 578 109 HOH HOH . F 4 HOH A 79 579 110 HOH HOH . F 4 HOH A 80 580 113 HOH HOH . F 4 HOH A 81 581 114 HOH HOH . F 4 HOH A 82 582 115 HOH HOH . F 4 HOH A 83 583 116 HOH HOH . F 4 HOH A 84 584 118 HOH HOH . F 4 HOH A 85 585 119 HOH HOH . F 4 HOH A 86 586 120 HOH HOH . F 4 HOH A 87 587 121 HOH HOH . F 4 HOH A 88 588 122 HOH HOH . F 4 HOH A 89 589 123 HOH HOH . F 4 HOH A 90 590 124 HOH HOH . F 4 HOH A 91 591 126 HOH HOH . F 4 HOH A 92 592 127 HOH HOH . F 4 HOH A 93 593 128 HOH HOH . F 4 HOH A 94 594 129 HOH HOH . F 4 HOH A 95 595 131 HOH HOH . F 4 HOH A 96 596 133 HOH HOH . F 4 HOH A 97 597 134 HOH HOH . F 4 HOH A 98 598 135 HOH HOH . F 4 HOH A 99 599 136 HOH HOH . F 4 HOH A 100 600 137 HOH HOH . F 4 HOH A 101 601 138 HOH HOH . F 4 HOH A 102 602 140 HOH HOH . F 4 HOH A 103 603 141 HOH HOH . F 4 HOH A 104 604 142 HOH HOH . F 4 HOH A 105 605 144 HOH HOH . F 4 HOH A 106 606 145 HOH HOH . F 4 HOH A 107 607 146 HOH HOH . F 4 HOH A 108 608 147 HOH HOH . F 4 HOH A 109 609 148 HOH HOH . F 4 HOH A 110 610 149 HOH HOH . F 4 HOH A 111 611 150 HOH HOH . F 4 HOH A 112 612 151 HOH HOH . F 4 HOH A 113 613 154 HOH HOH . F 4 HOH A 114 614 155 HOH HOH . F 4 HOH A 115 615 156 HOH HOH . F 4 HOH A 116 616 157 HOH HOH . F 4 HOH A 117 617 158 HOH HOH . F 4 HOH A 118 618 160 HOH HOH . F 4 HOH A 119 619 161 HOH HOH . F 4 HOH A 120 620 162 HOH HOH . F 4 HOH A 121 621 163 HOH HOH . F 4 HOH A 122 622 164 HOH HOH . F 4 HOH A 123 623 166 HOH HOH . F 4 HOH A 124 624 168 HOH HOH . F 4 HOH A 125 625 169 HOH HOH . F 4 HOH A 126 626 172 HOH HOH . F 4 HOH A 127 627 173 HOH HOH . F 4 HOH A 128 628 174 HOH HOH . F 4 HOH A 129 629 175 HOH HOH . F 4 HOH A 130 630 177 HOH HOH . F 4 HOH A 131 631 178 HOH HOH . F 4 HOH A 132 632 179 HOH HOH . F 4 HOH A 133 633 181 HOH HOH . F 4 HOH A 134 634 182 HOH HOH . F 4 HOH A 135 635 184 HOH HOH . F 4 HOH A 136 636 185 HOH HOH . F 4 HOH A 137 637 186 HOH HOH . F 4 HOH A 138 638 187 HOH HOH . F 4 HOH A 139 639 188 HOH HOH . F 4 HOH A 140 640 190 HOH HOH . F 4 HOH A 141 641 192 HOH HOH . F 4 HOH A 142 642 193 HOH HOH . F 4 HOH A 143 643 194 HOH HOH . F 4 HOH A 144 644 195 HOH HOH . F 4 HOH A 145 645 196 HOH HOH . F 4 HOH A 146 646 197 HOH HOH . F 4 HOH A 147 647 198 HOH HOH . F 4 HOH A 148 648 199 HOH HOH . F 4 HOH A 149 649 200 HOH HOH . F 4 HOH A 150 650 201 HOH HOH . F 4 HOH A 151 651 204 HOH HOH . F 4 HOH A 152 652 205 HOH HOH . F 4 HOH A 153 653 206 HOH HOH . F 4 HOH A 154 654 207 HOH HOH . F 4 HOH A 155 655 208 HOH HOH . G 4 HOH B 1 501 15 HOH HOH . G 4 HOH B 2 502 17 HOH HOH . G 4 HOH B 3 503 19 HOH HOH . G 4 HOH B 4 504 21 HOH HOH . G 4 HOH B 5 505 23 HOH HOH . G 4 HOH B 6 506 24 HOH HOH . G 4 HOH B 7 507 28 HOH HOH . G 4 HOH B 8 508 29 HOH HOH . G 4 HOH B 9 509 35 HOH HOH . G 4 HOH B 10 510 36 HOH HOH . G 4 HOH B 11 511 39 HOH HOH . G 4 HOH B 12 512 44 HOH HOH . G 4 HOH B 13 513 49 HOH HOH . G 4 HOH B 14 514 53 HOH HOH . G 4 HOH B 15 515 56 HOH HOH . G 4 HOH B 16 516 57 HOH HOH . G 4 HOH B 17 517 58 HOH HOH . G 4 HOH B 18 518 64 HOH HOH . G 4 HOH B 19 519 67 HOH HOH . G 4 HOH B 20 520 74 HOH HOH . G 4 HOH B 21 521 76 HOH HOH . G 4 HOH B 22 522 78 HOH HOH . G 4 HOH B 23 523 79 HOH HOH . G 4 HOH B 24 524 80 HOH HOH . G 4 HOH B 25 525 82 HOH HOH . G 4 HOH B 26 526 84 HOH HOH . G 4 HOH B 27 527 88 HOH HOH . G 4 HOH B 28 528 90 HOH HOH . G 4 HOH B 29 529 100 HOH HOH . G 4 HOH B 30 530 101 HOH HOH . G 4 HOH B 31 531 106 HOH HOH . G 4 HOH B 32 532 111 HOH HOH . G 4 HOH B 33 533 112 HOH HOH . G 4 HOH B 34 534 117 HOH HOH . G 4 HOH B 35 535 125 HOH HOH . G 4 HOH B 36 536 130 HOH HOH . G 4 HOH B 37 537 132 HOH HOH . G 4 HOH B 38 538 139 HOH HOH . G 4 HOH B 39 539 143 HOH HOH . G 4 HOH B 40 540 152 HOH HOH . G 4 HOH B 41 541 153 HOH HOH . G 4 HOH B 42 542 159 HOH HOH . G 4 HOH B 43 543 165 HOH HOH . G 4 HOH B 44 544 167 HOH HOH . G 4 HOH B 45 545 170 HOH HOH . G 4 HOH B 46 546 171 HOH HOH . G 4 HOH B 47 547 176 HOH HOH . G 4 HOH B 48 548 180 HOH HOH . G 4 HOH B 49 549 183 HOH HOH . G 4 HOH B 50 550 189 HOH HOH . G 4 HOH B 51 551 191 HOH HOH . G 4 HOH B 52 552 202 HOH HOH . G 4 HOH B 53 553 203 HOH HOH . G 4 HOH B 54 554 209 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -33.79 _atom_site.Cartn_y -5.716 _atom_site.Cartn_z 128.774 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 65.12 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #