data_4ERK # _model_server_result.job_id 3CatSSIwpeOKzArGeXbBXw _model_server_result.datetime_utc '2024-11-13 18:31:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4erk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":800}' # _entry.id 4ERK # _exptl.entry_id 4ERK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 298.343 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description OLOMOUCINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.05 _cell.angle_gamma 90 _cell.entry_id 4ERK _cell.length_a 48.87 _cell.length_b 70.26 _cell.length_c 59.97 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ERK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H18 N6 O' _chem_comp.formula_weight 298.343 _chem_comp.id OLO _chem_comp.mon_nstd_flag . _chem_comp.name OLOMOUCINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C OLO sing 237 n y N C7A OLO sing 238 n y N C3 OLO sing 239 n n C N1 OLO doub 240 n y C H OLO sing 241 n n N1 C3A OLO sing 242 n y C3A C7A OLO doub 243 n y C3A C1 OLO sing 244 n y C7A N3 OLO sing 245 n y C1 N2 OLO doub 246 n y C1 N5 OLO sing 247 n n N2 C2 OLO sing 248 n y C2 N3 OLO doub 249 n y C2 N4 OLO sing 250 n n C3 H31 OLO sing 251 n n C3 H32 OLO sing 252 n n C3 H33 OLO sing 253 n n N4 C4 OLO sing 254 n n N4 HN4 OLO sing 255 n n C4 C5 OLO sing 256 n n C4 H41 OLO sing 257 n n C4 H42 OLO sing 258 n n C5 O OLO sing 259 n n C5 H51 OLO sing 260 n n C5 H52 OLO sing 261 n n O HO OLO sing 262 n n N5 C6 OLO sing 263 n n N5 HN5 OLO sing 264 n n C6 C12 OLO sing 265 n n C6 H61 OLO sing 266 n n C6 H62 OLO sing 267 n n C7 C8 OLO doub 268 n y C7 C12 OLO sing 269 n y C7 H7 OLO sing 270 n n C8 C9 OLO sing 271 n y C8 H8 OLO sing 272 n n C9 C10 OLO doub 273 n y C9 H9 OLO sing 274 n n C10 C11 OLO sing 275 n y C10 H10 OLO sing 276 n n C11 C12 OLO doub 277 n y C11 H11 OLO sing 278 n n # _atom_sites.entry_id 4ERK _atom_sites.fract_transf_matrix[1][1] 0.020462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007066 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014233 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017641 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 990 990 SO4 SO4 . C 3 OLO A 1 800 800 OLO OLO . D 4 HOH A 1 401 401 HOH HOH . D 4 HOH A 2 402 402 HOH HOH . D 4 HOH A 3 403 403 HOH HOH . D 4 HOH A 4 404 404 HOH HOH . D 4 HOH A 5 405 405 HOH HOH . D 4 HOH A 6 406 406 HOH HOH . D 4 HOH A 7 407 407 HOH HOH . D 4 HOH A 8 408 408 HOH HOH . D 4 HOH A 9 409 409 HOH HOH . D 4 HOH A 10 410 410 HOH HOH . D 4 HOH A 11 411 411 HOH HOH . D 4 HOH A 12 412 412 HOH HOH . D 4 HOH A 13 413 413 HOH HOH . D 4 HOH A 14 414 414 HOH HOH . D 4 HOH A 15 415 415 HOH HOH . D 4 HOH A 16 416 416 HOH HOH . D 4 HOH A 17 417 417 HOH HOH . D 4 HOH A 18 418 418 HOH HOH . D 4 HOH A 19 419 419 HOH HOH . D 4 HOH A 20 420 420 HOH HOH . D 4 HOH A 21 421 421 HOH HOH . D 4 HOH A 22 422 422 HOH HOH . D 4 HOH A 23 423 423 HOH HOH . D 4 HOH A 24 424 424 HOH HOH . D 4 HOH A 25 425 425 HOH HOH . D 4 HOH A 26 426 426 HOH HOH . D 4 HOH A 27 427 427 HOH HOH . D 4 HOH A 28 428 428 HOH HOH . D 4 HOH A 29 429 429 HOH HOH . D 4 HOH A 30 430 430 HOH HOH . D 4 HOH A 31 431 431 HOH HOH . D 4 HOH A 32 432 432 HOH HOH . D 4 HOH A 33 433 433 HOH HOH . D 4 HOH A 34 434 434 HOH HOH . D 4 HOH A 35 435 435 HOH HOH . D 4 HOH A 36 436 436 HOH HOH . D 4 HOH A 37 437 437 HOH HOH . D 4 HOH A 38 438 438 HOH HOH . D 4 HOH A 39 439 439 HOH HOH . D 4 HOH A 40 440 440 HOH HOH . D 4 HOH A 41 441 441 HOH HOH . D 4 HOH A 42 442 442 HOH HOH . D 4 HOH A 43 443 443 HOH HOH . D 4 HOH A 44 444 444 HOH HOH . D 4 HOH A 45 445 445 HOH HOH . D 4 HOH A 46 446 446 HOH HOH . D 4 HOH A 47 447 447 HOH HOH . D 4 HOH A 48 448 448 HOH HOH . D 4 HOH A 49 449 449 HOH HOH . D 4 HOH A 50 450 450 HOH HOH . D 4 HOH A 51 451 451 HOH HOH . D 4 HOH A 52 452 452 HOH HOH . D 4 HOH A 53 453 453 HOH HOH . D 4 HOH A 54 454 454 HOH HOH . D 4 HOH A 55 455 455 HOH HOH . D 4 HOH A 56 456 456 HOH HOH . D 4 HOH A 57 457 457 HOH HOH . D 4 HOH A 58 458 458 HOH HOH . D 4 HOH A 59 459 459 HOH HOH . D 4 HOH A 60 460 460 HOH HOH . D 4 HOH A 61 461 461 HOH HOH . D 4 HOH A 62 462 462 HOH HOH . D 4 HOH A 63 463 463 HOH HOH . D 4 HOH A 64 464 464 HOH HOH . D 4 HOH A 65 465 465 HOH HOH . D 4 HOH A 66 466 466 HOH HOH . D 4 HOH A 67 467 467 HOH HOH . D 4 HOH A 68 468 468 HOH HOH . D 4 HOH A 69 469 469 HOH HOH . D 4 HOH A 70 470 470 HOH HOH . D 4 HOH A 71 471 471 HOH HOH . D 4 HOH A 72 472 472 HOH HOH . D 4 HOH A 73 473 473 HOH HOH . D 4 HOH A 74 474 474 HOH HOH . D 4 HOH A 75 475 475 HOH HOH . D 4 HOH A 76 476 476 HOH HOH . D 4 HOH A 77 477 477 HOH HOH . D 4 HOH A 78 478 478 HOH HOH . D 4 HOH A 79 479 479 HOH HOH . D 4 HOH A 80 480 480 HOH HOH . D 4 HOH A 81 481 481 HOH HOH . D 4 HOH A 82 482 482 HOH HOH . D 4 HOH A 83 483 483 HOH HOH . D 4 HOH A 84 484 484 HOH HOH . D 4 HOH A 85 485 485 HOH HOH . D 4 HOH A 86 486 486 HOH HOH . D 4 HOH A 87 487 487 HOH HOH . D 4 HOH A 88 488 488 HOH HOH . D 4 HOH A 89 489 489 HOH HOH . D 4 HOH A 90 490 490 HOH HOH . D 4 HOH A 91 491 491 HOH HOH . D 4 HOH A 92 492 492 HOH HOH . D 4 HOH A 93 493 493 HOH HOH . D 4 HOH A 94 494 494 HOH HOH . D 4 HOH A 95 495 495 HOH HOH . D 4 HOH A 96 496 496 HOH HOH . D 4 HOH A 97 497 497 HOH HOH . D 4 HOH A 98 498 498 HOH HOH . D 4 HOH A 99 499 499 HOH HOH . D 4 HOH A 100 500 500 HOH HOH . D 4 HOH A 101 501 501 HOH HOH . D 4 HOH A 102 502 502 HOH HOH . D 4 HOH A 103 503 503 HOH HOH . D 4 HOH A 104 504 504 HOH HOH . D 4 HOH A 105 505 505 HOH HOH . D 4 HOH A 106 506 506 HOH HOH . D 4 HOH A 107 507 507 HOH HOH . D 4 HOH A 108 508 508 HOH HOH . D 4 HOH A 109 509 509 HOH HOH . D 4 HOH A 110 510 510 HOH HOH . D 4 HOH A 111 511 511 HOH HOH . D 4 HOH A 112 512 512 HOH HOH . D 4 HOH A 113 513 513 HOH HOH . D 4 HOH A 114 514 514 HOH HOH . D 4 HOH A 115 515 515 HOH HOH . D 4 HOH A 116 516 516 HOH HOH . D 4 HOH A 117 517 517 HOH HOH . D 4 HOH A 118 518 518 HOH HOH . D 4 HOH A 119 519 519 HOH HOH . D 4 HOH A 120 520 520 HOH HOH . D 4 HOH A 121 521 521 HOH HOH . D 4 HOH A 122 522 522 HOH HOH . D 4 HOH A 123 523 523 HOH HOH . D 4 HOH A 124 524 524 HOH HOH . D 4 HOH A 125 525 525 HOH HOH . D 4 HOH A 126 526 526 HOH HOH . D 4 HOH A 127 527 527 HOH HOH . D 4 HOH A 128 528 528 HOH HOH . D 4 HOH A 129 529 529 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N OLO . . . C 3 -16.17 11.595 40.331 1 44.84 ? N OLO 800 A 1 HETATM 2 C C OLO . . . C 3 -17.307 10.999 40.841 1 44.07 ? C OLO 800 A 1 HETATM 3 N N1 OLO . . . C 3 -18.201 11.687 41.646 1 46.3 ? N1 OLO 800 A 1 HETATM 4 C C3A OLO . . . C 3 -17.558 12.91 41.668 1 44.67 ? C3A OLO 800 A 1 HETATM 5 C C7A OLO . . . C 3 -16.348 12.86 40.885 1 45.32 ? C7A OLO 800 A 1 HETATM 6 C C1 OLO . . . C 3 -17.931 14.124 42.339 1 44.44 ? C1 OLO 800 A 1 HETATM 7 N N2 OLO . . . C 3 -17.078 15.245 42.2 1 48.91 ? N2 OLO 800 A 1 HETATM 8 C C2 OLO . . . C 3 -15.892 15.212 41.429 1 45.45 ? C2 OLO 800 A 1 HETATM 9 N N3 OLO . . . C 3 -15.521 14.021 40.77 1 42.89 ? N3 OLO 800 A 1 HETATM 10 C C3 OLO . . . C 3 -15.104 11.036 39.466 1 48.51 ? C3 OLO 800 A 1 HETATM 11 N N4 OLO . . . C 3 -15.064 16.399 41.321 1 46.23 ? N4 OLO 800 A 1 HETATM 12 C C4 OLO . . . C 3 -15.454 17.811 41.488 1 45.39 ? C4 OLO 800 A 1 HETATM 13 C C5 OLO . . . C 3 -14.339 18.663 42.106 1 51.45 ? C5 OLO 800 A 1 HETATM 14 O O OLO . . . C 3 -14.372 18.596 43.526 1 51.56 ? O OLO 800 A 1 HETATM 15 N N5 OLO . . . C 3 -19.157 14.148 43.131 1 45.84 ? N5 OLO 800 A 1 HETATM 16 C C6 OLO . . . C 3 -19.79 15.193 43.979 1 49.02 ? C6 OLO 800 A 1 HETATM 17 C C7 OLO . . . C 3 -17.958 16.534 45.136 1 57.78 ? C7 OLO 800 A 1 HETATM 18 C C8 OLO . . . C 3 -17.248 17.732 45.373 1 60.81 ? C8 OLO 800 A 1 HETATM 19 C C9 OLO . . . C 3 -17.612 18.917 44.68 1 63.44 ? C9 OLO 800 A 1 HETATM 20 C C10 OLO . . . C 3 -18.688 18.898 43.749 1 62.07 ? C10 OLO 800 A 1 HETATM 21 C C11 OLO . . . C 3 -19.405 17.695 43.507 1 60.23 ? C11 OLO 800 A 1 HETATM 22 C C12 OLO . . . C 3 -19.045 16.506 44.197 1 54.69 ? C12 OLO 800 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 22 #