data_4ERW # _model_server_result.job_id QOPZgSH5JJspwuTKTbmWcg _model_server_result.datetime_utc '2024-11-24 06:19:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4erw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4ERW # _exptl.entry_id 4ERW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ERW _cell.length_a 53.63 _cell.length_b 71.34 _cell.length_c 72.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ERW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 184 A GLY 176 1_555 A N OCS 185 A OCS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C OCS 185 A OCS 177 1_555 A N LYS 186 A LYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 315 n n O4 C21 STU sing 316 n n C25 C24 STU sing 317 n n C25 N3 STU sing 318 n n C25 H25 STU sing 319 n n C24 C23 STU sing 320 n n C24 H241 STU sing 321 n n C24 H242 STU sing 322 n n C23 C22 STU sing 323 n n C23 N4 STU sing 324 n n C23 H23 STU sing 325 n n C22 C21 STU sing 326 n n C22 O6 STU sing 327 n n C22 H22 STU sing 328 n n C21 C26 STU sing 329 n n C21 N2 STU sing 330 n n C26 H261 STU sing 331 n n C26 H262 STU sing 332 n n C26 H263 STU sing 333 n n N2 C18 STU sing 334 n y N2 C17 STU sing 335 n y C18 C19 STU doub 336 n y C18 C11 STU sing 337 n y C19 C6 STU sing 338 n y C19 N3 STU sing 339 n y C6 C7 STU doub 340 n y C6 C5 STU sing 341 n y C7 C10 STU sing 342 n y C7 C8 STU sing 343 n n C10 C11 STU doub 344 n y C10 C9 STU sing 345 n n C11 C12 STU sing 346 n y C12 C17 STU doub 347 n y C12 C13 STU sing 348 n y C17 C16 STU sing 349 n y C16 C15 STU doub 350 n y C16 H16 STU sing 351 n n C15 C14 STU sing 352 n y C15 H15 STU sing 353 n n C14 C13 STU doub 354 n y C14 H14 STU sing 355 n n C13 H13 STU sing 356 n n C9 N1 STU sing 357 n n C9 H91 STU sing 358 n n C9 H92 STU sing 359 n n N1 C8 STU sing 360 n n N1 HN1 STU sing 361 n n C8 O5 STU doub 362 n n C5 C20 STU doub 363 n y C5 C4 STU sing 364 n y C20 C1 STU sing 365 n y C20 N3 STU sing 366 n y C1 C2 STU doub 367 n y C1 H1 STU sing 368 n n C2 C3 STU sing 369 n y C2 H2 STU sing 370 n n C3 C4 STU doub 371 n y C3 H3 STU sing 372 n n C4 H4 STU sing 373 n n O6 C27 STU sing 374 n n C27 H271 STU sing 375 n n C27 H272 STU sing 376 n n C27 H273 STU sing 377 n n N4 C28 STU sing 378 n n N4 HN4 STU sing 379 n n C28 H281 STU sing 380 n n C28 H282 STU sing 381 n n C28 H283 STU sing 382 n n # _atom_sites.entry_id 4ERW _atom_sites.fract_transf_matrix[1][1] 0.018646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 STU A 1 301 1 STU STU . C 3 EDO A 1 302 1 EDO EDO . D 3 EDO A 1 303 2 EDO EDO . E 3 EDO A 1 304 3 EDO EDO . F 3 EDO A 1 305 4 EDO EDO . G 3 EDO A 1 306 5 EDO EDO . H 3 EDO A 1 307 6 EDO EDO . I 3 EDO A 1 308 7 EDO EDO . J 3 EDO A 1 309 8 EDO EDO . K 3 EDO A 1 310 9 EDO EDO . L 3 EDO A 1 311 10 EDO EDO . M 3 EDO A 1 312 11 EDO EDO . N 3 EDO A 1 313 12 EDO EDO . O 3 EDO A 1 314 13 EDO EDO . P 3 EDO A 1 315 14 EDO EDO . Q 3 EDO A 1 316 15 EDO EDO . R 3 EDO A 1 317 16 EDO EDO . S 4 HOH A 1 401 1 HOH HOH . S 4 HOH A 2 402 2 HOH HOH . S 4 HOH A 3 403 3 HOH HOH . S 4 HOH A 4 404 4 HOH HOH . S 4 HOH A 5 405 5 HOH HOH . S 4 HOH A 6 406 6 HOH HOH . S 4 HOH A 7 407 7 HOH HOH . S 4 HOH A 8 408 8 HOH HOH . S 4 HOH A 9 409 9 HOH HOH . S 4 HOH A 10 410 10 HOH HOH . S 4 HOH A 11 411 11 HOH HOH . S 4 HOH A 12 412 12 HOH HOH . S 4 HOH A 13 413 13 HOH HOH . S 4 HOH A 14 414 14 HOH HOH . S 4 HOH A 15 415 15 HOH HOH . S 4 HOH A 16 416 16 HOH HOH . S 4 HOH A 17 417 17 HOH HOH . S 4 HOH A 18 418 18 HOH HOH . S 4 HOH A 19 419 20 HOH HOH . S 4 HOH A 20 420 21 HOH HOH . S 4 HOH A 21 421 23 HOH HOH . S 4 HOH A 22 422 24 HOH HOH . S 4 HOH A 23 423 25 HOH HOH . S 4 HOH A 24 424 26 HOH HOH . S 4 HOH A 25 425 27 HOH HOH . S 4 HOH A 26 426 28 HOH HOH . S 4 HOH A 27 427 29 HOH HOH . S 4 HOH A 28 428 31 HOH HOH . S 4 HOH A 29 429 33 HOH HOH . S 4 HOH A 30 430 34 HOH HOH . S 4 HOH A 31 431 35 HOH HOH . S 4 HOH A 32 432 36 HOH HOH . S 4 HOH A 33 433 38 HOH HOH . S 4 HOH A 34 434 39 HOH HOH . S 4 HOH A 35 435 41 HOH HOH . S 4 HOH A 36 436 42 HOH HOH . S 4 HOH A 37 437 43 HOH HOH . S 4 HOH A 38 438 44 HOH HOH . S 4 HOH A 39 439 45 HOH HOH . S 4 HOH A 40 440 46 HOH HOH . S 4 HOH A 41 441 47 HOH HOH . S 4 HOH A 42 442 48 HOH HOH . S 4 HOH A 43 443 49 HOH HOH . S 4 HOH A 44 444 51 HOH HOH . S 4 HOH A 45 445 55 HOH HOH . S 4 HOH A 46 446 56 HOH HOH . S 4 HOH A 47 447 59 HOH HOH . S 4 HOH A 48 448 61 HOH HOH . S 4 HOH A 49 449 62 HOH HOH . S 4 HOH A 50 450 63 HOH HOH . S 4 HOH A 51 451 65 HOH HOH . S 4 HOH A 52 452 70 HOH HOH . S 4 HOH A 53 453 73 HOH HOH . S 4 HOH A 54 454 74 HOH HOH . S 4 HOH A 55 455 75 HOH HOH . S 4 HOH A 56 456 76 HOH HOH . S 4 HOH A 57 457 77 HOH HOH . S 4 HOH A 58 458 79 HOH HOH . S 4 HOH A 59 459 80 HOH HOH . S 4 HOH A 60 460 83 HOH HOH . S 4 HOH A 61 461 84 HOH HOH . S 4 HOH A 62 462 87 HOH HOH . S 4 HOH A 63 463 88 HOH HOH . S 4 HOH A 64 464 89 HOH HOH . S 4 HOH A 65 465 90 HOH HOH . S 4 HOH A 66 466 93 HOH HOH . S 4 HOH A 67 467 95 HOH HOH . S 4 HOH A 68 468 101 HOH HOH . S 4 HOH A 69 469 102 HOH HOH . S 4 HOH A 70 470 103 HOH HOH . S 4 HOH A 71 471 106 HOH HOH . S 4 HOH A 72 472 107 HOH HOH . S 4 HOH A 73 473 108 HOH HOH . S 4 HOH A 74 474 109 HOH HOH . S 4 HOH A 75 475 111 HOH HOH . S 4 HOH A 76 476 112 HOH HOH . S 4 HOH A 77 477 114 HOH HOH . S 4 HOH A 78 478 115 HOH HOH . S 4 HOH A 79 479 116 HOH HOH . S 4 HOH A 80 480 117 HOH HOH . S 4 HOH A 81 481 118 HOH HOH . S 4 HOH A 82 482 119 HOH HOH . S 4 HOH A 83 483 122 HOH HOH . S 4 HOH A 84 484 125 HOH HOH . S 4 HOH A 85 485 128 HOH HOH . S 4 HOH A 86 486 130 HOH HOH . S 4 HOH A 87 487 133 HOH HOH . S 4 HOH A 88 488 134 HOH HOH . S 4 HOH A 89 489 135 HOH HOH . S 4 HOH A 90 490 136 HOH HOH . S 4 HOH A 91 491 137 HOH HOH . S 4 HOH A 92 492 139 HOH HOH . S 4 HOH A 93 493 140 HOH HOH . S 4 HOH A 94 494 141 HOH HOH . S 4 HOH A 95 495 142 HOH HOH . S 4 HOH A 96 496 143 HOH HOH . S 4 HOH A 97 497 144 HOH HOH . S 4 HOH A 98 498 147 HOH HOH . S 4 HOH A 99 499 148 HOH HOH . S 4 HOH A 100 500 149 HOH HOH . S 4 HOH A 101 501 150 HOH HOH . S 4 HOH A 102 502 151 HOH HOH . S 4 HOH A 103 503 152 HOH HOH . S 4 HOH A 104 504 153 HOH HOH . S 4 HOH A 105 505 154 HOH HOH . S 4 HOH A 106 506 155 HOH HOH . S 4 HOH A 107 507 157 HOH HOH . S 4 HOH A 108 508 158 HOH HOH . S 4 HOH A 109 509 159 HOH HOH . S 4 HOH A 110 510 160 HOH HOH . S 4 HOH A 111 511 161 HOH HOH . S 4 HOH A 112 512 162 HOH HOH . S 4 HOH A 113 513 163 HOH HOH . S 4 HOH A 114 514 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . B 2 0.109 -10.395 27.079 1 33.33 ? O4 STU 301 A 1 HETATM 2 C C25 STU . . . B 2 -1.338 -10.187 27.206 1 32.59 ? C25 STU 301 A 1 HETATM 3 C C24 STU . . . B 2 -2.175 -10.523 25.956 1 35.84 ? C24 STU 301 A 1 HETATM 4 C C23 STU . . . B 2 -1.257 -10.875 24.853 1 29.99 ? C23 STU 301 A 1 HETATM 5 C C22 STU . . . B 2 -0.264 -9.769 24.704 1 29.26 ? C22 STU 301 A 1 HETATM 6 C C21 STU . . . B 2 0.695 -9.782 25.975 1 31.19 ? C21 STU 301 A 1 HETATM 7 C C26 STU . . . B 2 1.84 -10.738 25.671 1 30.07 ? C26 STU 301 A 1 HETATM 8 N N2 STU . . . B 2 1.158 -8.335 26.181 1 25.52 ? N2 STU 301 A 1 HETATM 9 C C18 STU . . . B 2 0.402 -7.487 26.914 1 25.74 ? C18 STU 301 A 1 HETATM 10 C C19 STU . . . B 2 -0.787 -7.699 27.59 1 24.37 ? C19 STU 301 A 1 HETATM 11 C C6 STU . . . B 2 -1.445 -6.636 28.329 1 28.54 ? C6 STU 301 A 1 HETATM 12 C C7 STU . . . B 2 -0.815 -5.283 28.351 1 22.59 ? C7 STU 301 A 1 HETATM 13 C C10 STU . . . B 2 0.368 -5.06 27.666 1 24.89 ? C10 STU 301 A 1 HETATM 14 C C11 STU . . . B 2 1.005 -6.167 26.922 1 27.35 ? C11 STU 301 A 1 HETATM 15 C C12 STU . . . B 2 2.251 -6.278 26.104 1 23.06 ? C12 STU 301 A 1 HETATM 16 C C17 STU . . . B 2 2.335 -7.606 25.651 1 23.52 ? C17 STU 301 A 1 HETATM 17 C C16 STU . . . B 2 3.458 -7.958 24.83 1 28.22 ? C16 STU 301 A 1 HETATM 18 C C15 STU . . . B 2 4.43 -7.017 24.515 1 27.45 ? C15 STU 301 A 1 HETATM 19 C C14 STU . . . B 2 4.321 -5.697 24.976 1 29.35 ? C14 STU 301 A 1 HETATM 20 C C13 STU . . . B 2 3.216 -5.327 25.781 1 22.9 ? C13 STU 301 A 1 HETATM 21 C C9 STU . . . B 2 0.719 -3.671 27.868 1 21.85 ? C9 STU 301 A 1 HETATM 22 N N1 STU . . . B 2 -0.239 -3.107 28.635 1 23.85 ? N1 STU 301 A 1 HETATM 23 C C8 STU . . . B 2 -1.171 -4.015 28.965 1 23.31 ? C8 STU 301 A 1 HETATM 24 O O5 STU . . . B 2 -2.274 -3.776 29.717 1 28.62 ? O5 STU 301 A 1 HETATM 25 C C5 STU . . . B 2 -2.721 -7.257 28.942 1 25.43 ? C5 STU 301 A 1 HETATM 26 C C20 STU . . . B 2 -2.76 -8.643 28.539 1 30.89 ? C20 STU 301 A 1 HETATM 27 C C1 STU . . . B 2 -3.831 -9.488 28.959 1 31.21 ? C1 STU 301 A 1 HETATM 28 C C2 STU . . . B 2 -4.864 -8.954 29.777 1 29.11 ? C2 STU 301 A 1 HETATM 29 C C3 STU . . . B 2 -4.829 -7.578 30.171 1 30.82 ? C3 STU 301 A 1 HETATM 30 C C4 STU . . . B 2 -3.75 -6.733 29.753 1 28.92 ? C4 STU 301 A 1 HETATM 31 N N3 STU . . . B 2 -1.571 -8.853 27.72 1 27.86 ? N3 STU 301 A 1 HETATM 32 O O6 STU . . . B 2 -0.963 -8.549 24.581 1 29.71 ? O6 STU 301 A 1 HETATM 33 C C27 STU . . . B 2 -0.572 -7.575 23.65 1 36.33 ? C27 STU 301 A 1 HETATM 34 N N4 STU . . . B 2 -2.048 -11.039 23.632 1 37.49 ? N4 STU 301 A 1 HETATM 35 C C28 STU . . . B 2 -2.675 -12.351 23.594 1 40.68 ? C28 STU 301 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 35 #