data_4ESY
#
_model_server_result.job_id            2QF4jVW1ZX0SmrfoeE40Rw 
_model_server_result.datetime_utc      '2024-10-11 01:23:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4esy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    4ESY 
#
_exptl.entry_id    4ESY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.13 
_cell.angle_gamma         90 
_cell.entry_id            4ESY 
_cell.length_a            51.09 
_cell.length_b            74.118 
_cell.length_c            50.981 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4ESY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 43 A THR 338 1_555 A N MSE 44 A MSE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 44 A MSE 339 1_555 A N LEU 45 A LEU 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 A C VAL 110 A VAL 405 1_555 A N MSE 111 A MSE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale4 A C MSE 111 A MSE 406 1_555 A N THR 112 A THR 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale5 A C GLN 130 A GLN 425 1_555 A N MSE 131 A MSE 426 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 A C GLN 130 A GLN 425 1_555 A N MSE 131 A MSE 426 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale7 A C MSE 131 A MSE 426 1_555 A N ARG 132 A ARG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale8 B C THR 43 B THR 338 1_555 B N MSE 44 B MSE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale9 B C MSE 44 B MSE 339 1_555 B N LEU 45 B LEU 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale10 B C GLY 50 B GLY 345 1_555 B N CSO 51 B CSO 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale11 B C CSO 51 B CSO 346 1_555 B N ALA 52 B ALA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale12 B C VAL 110 B VAL 405 1_555 B N MSE 111 B MSE 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale13 B C MSE 111 B MSE 406 1_555 B N THR 112 B THR 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale14 B C GLN 130 B GLN 425 1_555 B N MSE 131 B MSE 426 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale15 B C GLN 130 B GLN 425 1_555 B N MSE 131 B MSE 426 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale16 B C MSE 131 B MSE 426 1_555 B N ARG 132 B ARG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
_atom_sites.entry_id                     4ESY 
_atom_sites.fract_transf_matrix[1][1]    0.019573 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003145 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013492 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019867 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EDO A 1 501 471 EDO EDO . 
D 4 CL A 1 502 472 CL CL . 
E 4 CL A 1 503 473 CL CL . 
F 4 CL A 1 504 472 CL CL . 
G 3 EDO B 1 501 471 EDO EDO . 
H 5 HOH A 1 601 3 HOH HOH . 
H 5 HOH A 2 602 6 HOH HOH . 
H 5 HOH A 3 603 7 HOH HOH . 
H 5 HOH A 4 604 8 HOH HOH . 
H 5 HOH A 5 605 9 HOH HOH . 
H 5 HOH A 6 606 13 HOH HOH . 
H 5 HOH A 7 607 17 HOH HOH . 
H 5 HOH A 8 608 19 HOH HOH . 
H 5 HOH A 9 609 21 HOH HOH . 
H 5 HOH A 10 610 23 HOH HOH . 
H 5 HOH A 11 611 24 HOH HOH . 
H 5 HOH A 12 612 26 HOH HOH . 
H 5 HOH A 13 613 28 HOH HOH . 
H 5 HOH A 14 614 29 HOH HOH . 
H 5 HOH A 15 615 34 HOH HOH . 
H 5 HOH A 16 616 36 HOH HOH . 
H 5 HOH A 17 617 37 HOH HOH . 
H 5 HOH A 18 618 39 HOH HOH . 
H 5 HOH A 19 619 42 HOH HOH . 
H 5 HOH A 20 620 43 HOH HOH . 
H 5 HOH A 21 621 45 HOH HOH . 
H 5 HOH A 22 622 46 HOH HOH . 
H 5 HOH A 23 623 52 HOH HOH . 
H 5 HOH A 24 624 56 HOH HOH . 
H 5 HOH A 25 625 59 HOH HOH . 
H 5 HOH A 26 626 63 HOH HOH . 
H 5 HOH A 27 627 64 HOH HOH . 
H 5 HOH A 28 628 65 HOH HOH . 
H 5 HOH A 29 629 66 HOH HOH . 
H 5 HOH A 30 630 69 HOH HOH . 
H 5 HOH A 31 631 70 HOH HOH . 
H 5 HOH A 32 632 71 HOH HOH . 
H 5 HOH A 33 633 73 HOH HOH . 
H 5 HOH A 34 634 74 HOH HOH . 
H 5 HOH A 35 635 76 HOH HOH . 
H 5 HOH A 36 636 77 HOH HOH . 
H 5 HOH A 37 637 79 HOH HOH . 
H 5 HOH A 38 638 80 HOH HOH . 
H 5 HOH A 39 639 81 HOH HOH . 
H 5 HOH A 40 640 82 HOH HOH . 
H 5 HOH A 41 641 83 HOH HOH . 
H 5 HOH A 42 642 84 HOH HOH . 
H 5 HOH A 43 643 87 HOH HOH . 
H 5 HOH A 44 644 88 HOH HOH . 
H 5 HOH A 45 645 89 HOH HOH . 
H 5 HOH A 46 646 93 HOH HOH . 
H 5 HOH A 47 647 94 HOH HOH . 
H 5 HOH A 48 648 95 HOH HOH . 
H 5 HOH A 49 649 96 HOH HOH . 
H 5 HOH A 50 650 102 HOH HOH . 
H 5 HOH A 51 651 105 HOH HOH . 
H 5 HOH A 52 652 106 HOH HOH . 
H 5 HOH A 53 653 107 HOH HOH . 
H 5 HOH A 54 654 108 HOH HOH . 
H 5 HOH A 55 655 109 HOH HOH . 
H 5 HOH A 56 656 115 HOH HOH . 
H 5 HOH A 57 657 117 HOH HOH . 
H 5 HOH A 58 658 119 HOH HOH . 
H 5 HOH A 59 659 120 HOH HOH . 
H 5 HOH A 60 660 121 HOH HOH . 
H 5 HOH A 61 661 122 HOH HOH . 
H 5 HOH A 62 662 127 HOH HOH . 
H 5 HOH A 63 663 128 HOH HOH . 
H 5 HOH A 64 664 131 HOH HOH . 
H 5 HOH A 65 665 132 HOH HOH . 
H 5 HOH A 66 666 133 HOH HOH . 
H 5 HOH A 67 667 135 HOH HOH . 
H 5 HOH A 68 668 136 HOH HOH . 
H 5 HOH A 69 669 137 HOH HOH . 
H 5 HOH A 70 670 144 HOH HOH . 
H 5 HOH A 71 671 145 HOH HOH . 
H 5 HOH A 72 672 147 HOH HOH . 
H 5 HOH A 73 673 150 HOH HOH . 
H 5 HOH A 74 674 152 HOH HOH . 
H 5 HOH A 75 675 153 HOH HOH . 
H 5 HOH A 76 676 154 HOH HOH . 
H 5 HOH A 77 677 155 HOH HOH . 
H 5 HOH A 78 678 156 HOH HOH . 
H 5 HOH A 79 679 157 HOH HOH . 
H 5 HOH A 80 680 158 HOH HOH . 
H 5 HOH A 81 681 159 HOH HOH . 
H 5 HOH A 82 682 160 HOH HOH . 
H 5 HOH A 83 683 161 HOH HOH . 
H 5 HOH A 84 684 162 HOH HOH . 
H 5 HOH A 85 685 163 HOH HOH . 
H 5 HOH A 86 686 164 HOH HOH . 
H 5 HOH A 87 687 165 HOH HOH . 
H 5 HOH A 88 688 166 HOH HOH . 
H 5 HOH A 89 689 167 HOH HOH . 
H 5 HOH A 90 690 168 HOH HOH . 
H 5 HOH A 91 691 169 HOH HOH . 
H 5 HOH A 92 692 182 HOH HOH . 
H 5 HOH A 93 693 183 HOH HOH . 
H 5 HOH A 94 694 184 HOH HOH . 
H 5 HOH A 95 695 185 HOH HOH . 
H 5 HOH A 96 696 187 HOH HOH . 
H 5 HOH A 97 697 188 HOH HOH . 
I 5 HOH B 1 601 1 HOH HOH . 
I 5 HOH B 2 602 2 HOH HOH . 
I 5 HOH B 3 603 4 HOH HOH . 
I 5 HOH B 4 604 5 HOH HOH . 
I 5 HOH B 5 605 10 HOH HOH . 
I 5 HOH B 6 606 11 HOH HOH . 
I 5 HOH B 7 607 12 HOH HOH . 
I 5 HOH B 8 608 14 HOH HOH . 
I 5 HOH B 9 609 15 HOH HOH . 
I 5 HOH B 10 610 16 HOH HOH . 
I 5 HOH B 11 611 18 HOH HOH . 
I 5 HOH B 12 612 20 HOH HOH . 
I 5 HOH B 13 613 22 HOH HOH . 
I 5 HOH B 14 614 25 HOH HOH . 
I 5 HOH B 15 615 27 HOH HOH . 
I 5 HOH B 16 616 30 HOH HOH . 
I 5 HOH B 17 617 31 HOH HOH . 
I 5 HOH B 18 618 32 HOH HOH . 
I 5 HOH B 19 619 33 HOH HOH . 
I 5 HOH B 20 620 35 HOH HOH . 
I 5 HOH B 21 621 38 HOH HOH . 
I 5 HOH B 22 622 40 HOH HOH . 
I 5 HOH B 23 623 41 HOH HOH . 
I 5 HOH B 24 624 44 HOH HOH . 
I 5 HOH B 25 625 47 HOH HOH . 
I 5 HOH B 26 626 48 HOH HOH . 
I 5 HOH B 27 627 49 HOH HOH . 
I 5 HOH B 28 628 50 HOH HOH . 
I 5 HOH B 29 629 51 HOH HOH . 
I 5 HOH B 30 630 53 HOH HOH . 
I 5 HOH B 31 631 54 HOH HOH . 
I 5 HOH B 32 632 55 HOH HOH . 
I 5 HOH B 33 633 57 HOH HOH . 
I 5 HOH B 34 634 58 HOH HOH . 
I 5 HOH B 35 635 60 HOH HOH . 
I 5 HOH B 36 636 61 HOH HOH . 
I 5 HOH B 37 637 62 HOH HOH . 
I 5 HOH B 38 638 67 HOH HOH . 
I 5 HOH B 39 639 68 HOH HOH . 
I 5 HOH B 40 640 72 HOH HOH . 
I 5 HOH B 41 641 75 HOH HOH . 
I 5 HOH B 42 642 78 HOH HOH . 
I 5 HOH B 43 643 85 HOH HOH . 
I 5 HOH B 44 644 86 HOH HOH . 
I 5 HOH B 45 645 90 HOH HOH . 
I 5 HOH B 46 646 91 HOH HOH . 
I 5 HOH B 47 647 92 HOH HOH . 
I 5 HOH B 48 648 97 HOH HOH . 
I 5 HOH B 49 649 98 HOH HOH . 
I 5 HOH B 50 650 99 HOH HOH . 
I 5 HOH B 51 651 100 HOH HOH . 
I 5 HOH B 52 652 101 HOH HOH . 
I 5 HOH B 53 653 103 HOH HOH . 
I 5 HOH B 54 654 104 HOH HOH . 
I 5 HOH B 55 655 110 HOH HOH . 
I 5 HOH B 56 656 111 HOH HOH . 
I 5 HOH B 57 657 112 HOH HOH . 
I 5 HOH B 58 658 113 HOH HOH . 
I 5 HOH B 59 659 114 HOH HOH . 
I 5 HOH B 60 660 116 HOH HOH . 
I 5 HOH B 61 661 118 HOH HOH . 
I 5 HOH B 62 662 123 HOH HOH . 
I 5 HOH B 63 663 124 HOH HOH . 
I 5 HOH B 64 664 125 HOH HOH . 
I 5 HOH B 65 665 126 HOH HOH . 
I 5 HOH B 66 666 129 HOH HOH . 
I 5 HOH B 67 667 130 HOH HOH . 
I 5 HOH B 68 668 134 HOH HOH . 
I 5 HOH B 69 669 138 HOH HOH . 
I 5 HOH B 70 670 139 HOH HOH . 
I 5 HOH B 71 671 140 HOH HOH . 
I 5 HOH B 72 672 141 HOH HOH . 
I 5 HOH B 73 673 142 HOH HOH . 
I 5 HOH B 74 674 143 HOH HOH . 
I 5 HOH B 75 675 146 HOH HOH . 
I 5 HOH B 76 676 148 HOH HOH . 
I 5 HOH B 77 677 149 HOH HOH . 
I 5 HOH B 78 678 151 HOH HOH . 
I 5 HOH B 79 679 170 HOH HOH . 
I 5 HOH B 80 680 171 HOH HOH . 
I 5 HOH B 81 681 172 HOH HOH . 
I 5 HOH B 82 682 173 HOH HOH . 
I 5 HOH B 83 683 174 HOH HOH . 
I 5 HOH B 84 684 175 HOH HOH . 
I 5 HOH B 85 685 176 HOH HOH . 
I 5 HOH B 86 686 177 HOH HOH . 
I 5 HOH B 87 687 178 HOH HOH . 
I 5 HOH B 88 688 179 HOH HOH . 
I 5 HOH B 89 689 180 HOH HOH . 
I 5 HOH B 90 690 181 HOH HOH . 
I 5 HOH B 91 691 186 HOH HOH . 
I 5 HOH B 92 692 189 HOH HOH . 
I 5 HOH B 93 693 190 HOH HOH . 
I 5 HOH B 94 694 191 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 -6.382 57.073 53.122 1 34.56 ? C1 EDO 501 A 1 
HETATM 2 O O1 EDO . . . C 3 -7.283 57.759 52.254 1 36.06 ? O1 EDO 501 A 1 
HETATM 3 C C2 EDO . . . C 3 -5.931 55.806 52.388 1 36.5 ? C2 EDO 501 A 1 
HETATM 4 O O2 EDO . . . C 3 -7.087 55 52.099 1 39.81 ? O2 EDO 501 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#