data_4ETP # _model_server_result.job_id M30QrJM4fDWZK2_GsExmKg _model_server_result.datetime_utc '2024-12-29 09:58:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4etp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":806}' # _entry.id 4ETP # _exptl.entry_id 4ETP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ETP _cell.length_a 88.06 _cell.length_b 94.939 _cell.length_c 114.59 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ETP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 I N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 41 B CYS 355 1_555 J C1 EBC . B EBC 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale2 B SG CYS 109 B CYS 423 1_555 J C8 EBC . B EBC 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? metalc ? metalc1 A OG1 THR 155 A THR 481 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc2 C O2B ADP . A ADP 801 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc3 D MG MG . A MG 802 1_555 L O HOH . A HOH 950 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc4 D MG MG . A MG 802 1_555 L O HOH . A HOH 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 D MG MG . A MG 802 1_555 L O HOH . A HOH 952 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc6 D MG MG . A MG 802 1_555 L O HOH . A HOH 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 194 n n C1 C2 GOL sing 195 n n C1 H11 GOL sing 196 n n C1 H12 GOL sing 197 n n O1 HO1 GOL sing 198 n n C2 O2 GOL sing 199 n n C2 C3 GOL sing 200 n n C2 H2 GOL sing 201 n n O2 HO2 GOL sing 202 n n C3 O3 GOL sing 203 n n C3 H31 GOL sing 204 n n C3 H32 GOL sing 205 n n O3 HO3 GOL sing 206 n n # _atom_sites.entry_id 4ETP _atom_sites.fract_transf_matrix[1][1] 0.011356 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008727 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ADP A 1 801 1 ADP ADP . D 4 MG A 1 802 1 MG MG . E 5 GOL A 1 803 1 GOL GOL . F 5 GOL A 1 804 2 GOL GOL . G 5 GOL A 1 805 3 GOL GOL . H 5 GOL A 1 806 4 GOL GOL . I 5 GOL A 1 807 5 GOL GOL . J 6 EBC B 1 701 700 EBC EBC . K 5 GOL B 1 702 6 GOL GOL . L 7 HOH A 1 901 1 HOH HOH . L 7 HOH A 2 902 2 HOH HOH . L 7 HOH A 3 903 3 HOH HOH . L 7 HOH A 4 904 4 HOH HOH . L 7 HOH A 5 905 5 HOH HOH . L 7 HOH A 6 906 6 HOH HOH . L 7 HOH A 7 907 7 HOH HOH . L 7 HOH A 8 908 8 HOH HOH . L 7 HOH A 9 909 9 HOH HOH . L 7 HOH A 10 910 10 HOH HOH . L 7 HOH A 11 911 11 HOH HOH . L 7 HOH A 12 912 12 HOH HOH . L 7 HOH A 13 913 13 HOH HOH . L 7 HOH A 14 914 14 HOH HOH . L 7 HOH A 15 915 15 HOH HOH . L 7 HOH A 16 916 16 HOH HOH . L 7 HOH A 17 917 17 HOH HOH . L 7 HOH A 18 918 18 HOH HOH . L 7 HOH A 19 919 19 HOH HOH . L 7 HOH A 20 920 20 HOH HOH . L 7 HOH A 21 921 21 HOH HOH . L 7 HOH A 22 922 22 HOH HOH . L 7 HOH A 23 923 23 HOH HOH . L 7 HOH A 24 924 24 HOH HOH . L 7 HOH A 25 925 25 HOH HOH . L 7 HOH A 26 926 26 HOH HOH . L 7 HOH A 27 927 27 HOH HOH . L 7 HOH A 28 928 28 HOH HOH . L 7 HOH A 29 929 29 HOH HOH . L 7 HOH A 30 930 31 HOH HOH . L 7 HOH A 31 931 32 HOH HOH . L 7 HOH A 32 932 33 HOH HOH . L 7 HOH A 33 933 34 HOH HOH . L 7 HOH A 34 934 35 HOH HOH . L 7 HOH A 35 935 36 HOH HOH . L 7 HOH A 36 936 37 HOH HOH . L 7 HOH A 37 937 38 HOH HOH . L 7 HOH A 38 938 39 HOH HOH . L 7 HOH A 39 939 40 HOH HOH . L 7 HOH A 40 940 42 HOH HOH . L 7 HOH A 41 941 43 HOH HOH . L 7 HOH A 42 942 44 HOH HOH . L 7 HOH A 43 943 45 HOH HOH . L 7 HOH A 44 944 46 HOH HOH . L 7 HOH A 45 945 47 HOH HOH . L 7 HOH A 46 946 48 HOH HOH . L 7 HOH A 47 947 49 HOH HOH . L 7 HOH A 48 948 50 HOH HOH . L 7 HOH A 49 949 51 HOH HOH . L 7 HOH A 50 950 52 HOH HOH . L 7 HOH A 51 951 53 HOH HOH . L 7 HOH A 52 952 54 HOH HOH . L 7 HOH A 53 953 55 HOH HOH . L 7 HOH A 54 954 56 HOH HOH . L 7 HOH A 55 955 57 HOH HOH . L 7 HOH A 56 956 58 HOH HOH . L 7 HOH A 57 957 59 HOH HOH . L 7 HOH A 58 958 60 HOH HOH . L 7 HOH A 59 959 61 HOH HOH . L 7 HOH A 60 960 62 HOH HOH . L 7 HOH A 61 961 63 HOH HOH . L 7 HOH A 62 962 64 HOH HOH . L 7 HOH A 63 963 65 HOH HOH . L 7 HOH A 64 964 66 HOH HOH . L 7 HOH A 65 965 67 HOH HOH . L 7 HOH A 66 966 69 HOH HOH . L 7 HOH A 67 967 70 HOH HOH . L 7 HOH A 68 968 71 HOH HOH . L 7 HOH A 69 969 72 HOH HOH . L 7 HOH A 70 970 74 HOH HOH . L 7 HOH A 71 971 75 HOH HOH . L 7 HOH A 72 972 76 HOH HOH . L 7 HOH A 73 973 77 HOH HOH . L 7 HOH A 74 974 79 HOH HOH . L 7 HOH A 75 975 81 HOH HOH . L 7 HOH A 76 976 82 HOH HOH . L 7 HOH A 77 977 83 HOH HOH . L 7 HOH A 78 978 84 HOH HOH . L 7 HOH A 79 979 85 HOH HOH . L 7 HOH A 80 980 87 HOH HOH . L 7 HOH A 81 981 88 HOH HOH . L 7 HOH A 82 982 89 HOH HOH . L 7 HOH A 83 983 93 HOH HOH . L 7 HOH A 84 984 94 HOH HOH . L 7 HOH A 85 985 96 HOH HOH . L 7 HOH A 86 986 97 HOH HOH . L 7 HOH A 87 987 99 HOH HOH . L 7 HOH A 88 988 100 HOH HOH . L 7 HOH A 89 989 101 HOH HOH . L 7 HOH A 90 990 103 HOH HOH . L 7 HOH A 91 991 104 HOH HOH . L 7 HOH A 92 992 105 HOH HOH . L 7 HOH A 93 993 107 HOH HOH . L 7 HOH A 94 994 108 HOH HOH . L 7 HOH A 95 995 110 HOH HOH . L 7 HOH A 96 996 111 HOH HOH . L 7 HOH A 97 997 113 HOH HOH . L 7 HOH A 98 998 114 HOH HOH . L 7 HOH A 99 999 115 HOH HOH . L 7 HOH A 100 1000 116 HOH HOH . L 7 HOH A 101 1001 119 HOH HOH . L 7 HOH A 102 1002 120 HOH HOH . L 7 HOH A 103 1003 121 HOH HOH . L 7 HOH A 104 1004 123 HOH HOH . L 7 HOH A 105 1005 124 HOH HOH . L 7 HOH A 106 1006 125 HOH HOH . L 7 HOH A 107 1007 126 HOH HOH . L 7 HOH A 108 1008 127 HOH HOH . L 7 HOH A 109 1009 128 HOH HOH . L 7 HOH A 110 1010 129 HOH HOH . L 7 HOH A 111 1011 130 HOH HOH . L 7 HOH A 112 1012 132 HOH HOH . L 7 HOH A 113 1013 133 HOH HOH . L 7 HOH A 114 1014 134 HOH HOH . L 7 HOH A 115 1015 135 HOH HOH . L 7 HOH A 116 1016 136 HOH HOH . L 7 HOH A 117 1017 137 HOH HOH . L 7 HOH A 118 1018 138 HOH HOH . L 7 HOH A 119 1019 140 HOH HOH . L 7 HOH A 120 1020 141 HOH HOH . L 7 HOH A 121 1021 142 HOH HOH . L 7 HOH A 122 1022 144 HOH HOH . L 7 HOH A 123 1023 145 HOH HOH . L 7 HOH A 124 1024 146 HOH HOH . L 7 HOH A 125 1025 147 HOH HOH . L 7 HOH A 126 1026 148 HOH HOH . L 7 HOH A 127 1027 149 HOH HOH . L 7 HOH A 128 1028 150 HOH HOH . L 7 HOH A 129 1029 151 HOH HOH . L 7 HOH A 130 1030 152 HOH HOH . L 7 HOH A 131 1031 153 HOH HOH . L 7 HOH A 132 1032 154 HOH HOH . L 7 HOH A 133 1033 155 HOH HOH . L 7 HOH A 134 1034 156 HOH HOH . L 7 HOH A 135 1035 157 HOH HOH . L 7 HOH A 136 1036 158 HOH HOH . L 7 HOH A 137 1037 159 HOH HOH . L 7 HOH A 138 1038 160 HOH HOH . L 7 HOH A 139 1039 165 HOH HOH . L 7 HOH A 140 1040 166 HOH HOH . L 7 HOH A 141 1041 167 HOH HOH . L 7 HOH A 142 1042 168 HOH HOH . L 7 HOH A 143 1043 169 HOH HOH . L 7 HOH A 144 1044 170 HOH HOH . L 7 HOH A 145 1045 174 HOH HOH . L 7 HOH A 146 1046 175 HOH HOH . L 7 HOH A 147 1047 177 HOH HOH . L 7 HOH A 148 1048 178 HOH HOH . L 7 HOH A 149 1049 179 HOH HOH . L 7 HOH A 150 1050 180 HOH HOH . L 7 HOH A 151 1051 181 HOH HOH . L 7 HOH A 152 1052 182 HOH HOH . L 7 HOH A 153 1053 183 HOH HOH . L 7 HOH A 154 1054 184 HOH HOH . L 7 HOH A 155 1055 185 HOH HOH . L 7 HOH A 156 1056 186 HOH HOH . L 7 HOH A 157 1057 188 HOH HOH . L 7 HOH A 158 1058 189 HOH HOH . L 7 HOH A 159 1059 190 HOH HOH . L 7 HOH A 160 1060 191 HOH HOH . L 7 HOH A 161 1061 192 HOH HOH . L 7 HOH A 162 1062 193 HOH HOH . L 7 HOH A 163 1063 194 HOH HOH . L 7 HOH A 164 1064 195 HOH HOH . L 7 HOH A 165 1065 196 HOH HOH . L 7 HOH A 166 1066 197 HOH HOH . L 7 HOH A 167 1067 198 HOH HOH . L 7 HOH A 168 1068 199 HOH HOH . L 7 HOH A 169 1069 200 HOH HOH . L 7 HOH A 170 1070 201 HOH HOH . L 7 HOH A 171 1071 205 HOH HOH . L 7 HOH A 172 1072 206 HOH HOH . L 7 HOH A 173 1073 207 HOH HOH . L 7 HOH A 174 1074 208 HOH HOH . L 7 HOH A 175 1075 209 HOH HOH . L 7 HOH A 176 1076 210 HOH HOH . L 7 HOH A 177 1077 211 HOH HOH . L 7 HOH A 178 1078 212 HOH HOH . L 7 HOH A 179 1079 215 HOH HOH . L 7 HOH A 180 1080 217 HOH HOH . L 7 HOH A 181 1081 218 HOH HOH . L 7 HOH A 182 1082 219 HOH HOH . L 7 HOH A 183 1083 221 HOH HOH . L 7 HOH A 184 1084 222 HOH HOH . L 7 HOH A 185 1085 223 HOH HOH . L 7 HOH A 186 1086 224 HOH HOH . L 7 HOH A 187 1087 225 HOH HOH . L 7 HOH A 188 1088 227 HOH HOH . L 7 HOH A 189 1089 228 HOH HOH . L 7 HOH A 190 1090 229 HOH HOH . L 7 HOH A 191 1091 233 HOH HOH . L 7 HOH A 192 1092 237 HOH HOH . L 7 HOH A 193 1093 238 HOH HOH . L 7 HOH A 194 1094 239 HOH HOH . L 7 HOH A 195 1095 241 HOH HOH . L 7 HOH A 196 1096 243 HOH HOH . L 7 HOH A 197 1097 244 HOH HOH . M 7 HOH B 1 801 30 HOH HOH . M 7 HOH B 2 802 41 HOH HOH . M 7 HOH B 3 803 68 HOH HOH . M 7 HOH B 4 804 73 HOH HOH . M 7 HOH B 5 805 78 HOH HOH . M 7 HOH B 6 806 80 HOH HOH . M 7 HOH B 7 807 86 HOH HOH . M 7 HOH B 8 808 90 HOH HOH . M 7 HOH B 9 809 91 HOH HOH . M 7 HOH B 10 810 92 HOH HOH . M 7 HOH B 11 811 95 HOH HOH . M 7 HOH B 12 812 98 HOH HOH . M 7 HOH B 13 813 102 HOH HOH . M 7 HOH B 14 814 106 HOH HOH . M 7 HOH B 15 815 109 HOH HOH . M 7 HOH B 16 816 112 HOH HOH . M 7 HOH B 17 817 117 HOH HOH . M 7 HOH B 18 818 118 HOH HOH . M 7 HOH B 19 819 122 HOH HOH . M 7 HOH B 20 820 131 HOH HOH . M 7 HOH B 21 821 139 HOH HOH . M 7 HOH B 22 822 143 HOH HOH . M 7 HOH B 23 823 161 HOH HOH . M 7 HOH B 24 824 162 HOH HOH . M 7 HOH B 25 825 163 HOH HOH . M 7 HOH B 26 826 164 HOH HOH . M 7 HOH B 27 827 171 HOH HOH . M 7 HOH B 28 828 172 HOH HOH . M 7 HOH B 29 829 173 HOH HOH . M 7 HOH B 30 830 176 HOH HOH . M 7 HOH B 31 831 187 HOH HOH . M 7 HOH B 32 832 202 HOH HOH . M 7 HOH B 33 833 203 HOH HOH . M 7 HOH B 34 834 204 HOH HOH . M 7 HOH B 35 835 213 HOH HOH . M 7 HOH B 36 836 214 HOH HOH . M 7 HOH B 37 837 216 HOH HOH . M 7 HOH B 38 838 220 HOH HOH . M 7 HOH B 39 839 226 HOH HOH . M 7 HOH B 40 840 230 HOH HOH . M 7 HOH B 41 841 231 HOH HOH . M 7 HOH B 42 842 232 HOH HOH . M 7 HOH B 43 843 234 HOH HOH . M 7 HOH B 44 844 235 HOH HOH . M 7 HOH B 45 845 236 HOH HOH . M 7 HOH B 46 846 240 HOH HOH . M 7 HOH B 47 847 242 HOH HOH . M 7 HOH B 48 848 245 HOH HOH . M 7 HOH B 49 849 246 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 5 18.552 -20.847 -0.525 0.5 42.31 ? C1 GOL 806 A 1 HETATM 2 O O1 GOL . . . H 5 17.558 -19.867 -0.847 0.5 33.98 ? O1 GOL 806 A 1 HETATM 3 C C2 GOL . . . H 5 18.269 -22.185 -1.197 0.5 43.55 ? C2 GOL 806 A 1 HETATM 4 O O2 GOL . . . H 5 19.281 -22.441 -2.176 0.5 51.4 ? O2 GOL 806 A 1 HETATM 5 C C3 GOL . . . H 5 18.297 -23.305 -0.166 0.5 39.37 ? C3 GOL 806 A 1 HETATM 6 O O3 GOL . . . H 5 16.989 -23.51 0.387 0.5 31.64 ? O3 GOL 806 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #