data_4EV6 # _model_server_result.job_id x6qW3-Vi_vIDL7RHuNNaFA _model_server_result.datetime_utc '2024-11-04 22:50:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ev6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"NA","auth_seq_id":406}' # _entry.id 4EV6 # _exptl.entry_id 4EV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 32 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.76 _cell.angle_gamma 90 _cell.entry_id 4EV6 _cell.length_a 103.11 _cell.length_b 124.83 _cell.length_c 111.88 _cell.Z_PDB 10 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N ? 3 GA N N ? 3 HA N N ? 3 KA N N ? 3 LA N N ? 3 MA N N ? 3 NA N N ? 3 OA N N ? 3 PA N N ? 3 QA N N ? 3 RA N N ? 3 SA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 91 A GLU 69 1_555 K MG MG . A MG 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.993 ? metalc ? metalc2 A OE2 GLU 93 A GLU 71 1_555 N MG MG . A MG 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? metalc ? metalc3 A OE2 GLU 184 A GLU 162 1_555 L MG MG . A MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc4 M MG MG . A MG 408 1_555 TA O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.995 ? metalc ? metalc5 N MG MG . A MG 409 1_555 TA O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc6 C OE2 GLU 91 C GLU 69 1_555 W MG MG . C MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc7 D O GLY 71 D GLY 49 1_555 GA MG MG . D MG 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc8 D OD2 ASP 76 D ASP 54 1_555 DA MG MG . D MG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc9 D OE2 GLU 177 D GLU 155 1_555 Y MG MG . D MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? metalc ? metalc10 D OD1 ASP 245 D ASP 223 1_555 BA MG MG . D MG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.951 ? metalc ? metalc11 LA MG MG . E MG 404 1_555 XA O HOH . E HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.79 ? metalc ? metalc12 NA MG MG . E MG 406 1_555 XA O HOH . E HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.897 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EV6 _atom_sites.fract_transf_matrix[1][1] 0.009698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000129 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008011 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 UMQ A 1 401 401 UMQ UMQ . G 2 UMQ A 1 402 402 UMQ UMQ . H 3 MG A 1 403 403 MG MG . I 3 MG A 1 404 404 MG MG . J 3 MG A 1 405 405 MG MG . K 3 MG A 1 406 406 MG MG . L 3 MG A 1 407 407 MG MG . M 3 MG A 1 408 409 MG MG . N 3 MG A 1 409 410 MG MG . O 2 UMQ B 1 401 401 UMQ UMQ . P 2 UMQ B 1 402 402 UMQ UMQ . Q 3 MG B 1 403 403 MG MG . R 3 MG B 1 404 404 MG MG . S 3 MG B 1 405 406 MG MG . T 2 UMQ C 1 401 401 UMQ UMQ . U 3 MG C 1 402 402 MG MG . V 3 MG C 1 403 403 MG MG . W 3 MG C 1 404 404 MG MG . X 2 UMQ D 1 401 401 UMQ UMQ . Y 3 MG D 1 402 402 MG MG . Z 3 MG D 1 403 403 MG MG . AA 3 MG D 1 404 404 MG MG . BA 3 MG D 1 405 405 MG MG . CA 3 MG D 1 406 406 MG MG . DA 3 MG D 1 407 407 MG MG . EA 3 MG D 1 408 408 MG MG . FA 3 MG D 1 409 409 MG MG . GA 3 MG D 1 410 411 MG MG . HA 3 MG D 1 411 412 MG MG . IA 2 UMQ E 1 401 401 UMQ UMQ . JA 2 UMQ E 1 402 402 UMQ UMQ . KA 3 MG E 1 403 403 MG MG . LA 3 MG E 1 404 404 MG MG . MA 3 MG E 1 405 405 MG MG . NA 3 MG E 1 406 406 MG MG . OA 3 MG E 1 407 407 MG MG . PA 3 MG E 1 408 408 MG MG . QA 3 MG E 1 409 409 MG MG . RA 3 MG E 1 410 410 MG MG . SA 3 MG E 1 411 411 MG MG . TA 4 HOH A 1 501 501 HOH HOH . TA 4 HOH A 2 502 502 HOH HOH . TA 4 HOH A 3 503 503 HOH HOH . TA 4 HOH A 4 504 504 HOH HOH . TA 4 HOH A 5 505 505 HOH HOH . TA 4 HOH A 6 506 506 HOH HOH . TA 4 HOH A 7 507 507 HOH HOH . TA 4 HOH A 8 508 508 HOH HOH . TA 4 HOH A 9 509 509 HOH HOH . TA 4 HOH A 10 510 510 HOH HOH . TA 4 HOH A 11 511 511 HOH HOH . TA 4 HOH A 12 512 512 HOH HOH . TA 4 HOH A 13 513 513 HOH HOH . TA 4 HOH A 14 514 514 HOH HOH . TA 4 HOH A 15 515 515 HOH HOH . TA 4 HOH A 16 516 516 HOH HOH . TA 4 HOH A 17 517 517 HOH HOH . TA 4 HOH A 18 518 518 HOH HOH . TA 4 HOH A 19 519 519 HOH HOH . TA 4 HOH A 20 520 520 HOH HOH . TA 4 HOH A 21 521 521 HOH HOH . TA 4 HOH A 22 522 522 HOH HOH . TA 4 HOH A 23 523 523 HOH HOH . TA 4 HOH A 24 524 524 HOH HOH . TA 4 HOH A 25 525 525 HOH HOH . TA 4 HOH A 26 526 526 HOH HOH . TA 4 HOH A 27 527 528 HOH HOH . TA 4 HOH A 28 528 529 HOH HOH . TA 4 HOH A 29 529 530 HOH HOH . TA 4 HOH A 30 530 531 HOH HOH . TA 4 HOH A 31 531 532 HOH HOH . TA 4 HOH A 32 532 533 HOH HOH . TA 4 HOH A 33 533 534 HOH HOH . TA 4 HOH A 34 534 535 HOH HOH . TA 4 HOH A 35 535 536 HOH HOH . TA 4 HOH A 36 536 537 HOH HOH . TA 4 HOH A 37 537 501 HOH HOH . TA 4 HOH A 38 538 546 HOH HOH . TA 4 HOH A 39 539 548 HOH HOH . TA 4 HOH A 40 540 550 HOH HOH . UA 4 HOH B 1 501 527 HOH HOH . UA 4 HOH B 2 502 502 HOH HOH . UA 4 HOH B 3 503 503 HOH HOH . UA 4 HOH B 4 504 504 HOH HOH . UA 4 HOH B 5 505 505 HOH HOH . UA 4 HOH B 6 506 506 HOH HOH . UA 4 HOH B 7 507 507 HOH HOH . UA 4 HOH B 8 508 508 HOH HOH . UA 4 HOH B 9 509 509 HOH HOH . UA 4 HOH B 10 510 510 HOH HOH . UA 4 HOH B 11 511 511 HOH HOH . UA 4 HOH B 12 512 512 HOH HOH . UA 4 HOH B 13 513 513 HOH HOH . UA 4 HOH B 14 514 514 HOH HOH . UA 4 HOH B 15 515 515 HOH HOH . UA 4 HOH B 16 516 517 HOH HOH . UA 4 HOH B 17 517 518 HOH HOH . UA 4 HOH B 18 518 519 HOH HOH . UA 4 HOH B 19 519 520 HOH HOH . UA 4 HOH B 20 520 521 HOH HOH . UA 4 HOH B 21 521 522 HOH HOH . UA 4 HOH B 22 522 523 HOH HOH . UA 4 HOH B 23 523 524 HOH HOH . UA 4 HOH B 24 524 525 HOH HOH . UA 4 HOH B 25 525 527 HOH HOH . UA 4 HOH B 26 526 528 HOH HOH . UA 4 HOH B 27 527 529 HOH HOH . UA 4 HOH B 28 528 530 HOH HOH . UA 4 HOH B 29 529 531 HOH HOH . UA 4 HOH B 30 530 532 HOH HOH . UA 4 HOH B 31 531 533 HOH HOH . UA 4 HOH B 32 532 534 HOH HOH . UA 4 HOH B 33 533 535 HOH HOH . UA 4 HOH B 34 534 536 HOH HOH . UA 4 HOH B 35 535 537 HOH HOH . UA 4 HOH B 36 536 538 HOH HOH . UA 4 HOH B 37 537 539 HOH HOH . UA 4 HOH B 38 538 3 HOH HOH . VA 4 HOH C 1 501 526 HOH HOH . VA 4 HOH C 2 502 501 HOH HOH . VA 4 HOH C 3 503 502 HOH HOH . VA 4 HOH C 4 504 503 HOH HOH . VA 4 HOH C 5 505 504 HOH HOH . VA 4 HOH C 6 506 505 HOH HOH . VA 4 HOH C 7 507 506 HOH HOH . VA 4 HOH C 8 508 507 HOH HOH . VA 4 HOH C 9 509 508 HOH HOH . VA 4 HOH C 10 510 509 HOH HOH . VA 4 HOH C 11 511 510 HOH HOH . VA 4 HOH C 12 512 511 HOH HOH . VA 4 HOH C 13 513 512 HOH HOH . VA 4 HOH C 14 514 513 HOH HOH . VA 4 HOH C 15 515 514 HOH HOH . VA 4 HOH C 16 516 515 HOH HOH . VA 4 HOH C 17 517 516 HOH HOH . VA 4 HOH C 18 518 517 HOH HOH . VA 4 HOH C 19 519 518 HOH HOH . VA 4 HOH C 20 520 519 HOH HOH . VA 4 HOH C 21 521 520 HOH HOH . VA 4 HOH C 22 522 521 HOH HOH . VA 4 HOH C 23 523 522 HOH HOH . VA 4 HOH C 24 524 523 HOH HOH . VA 4 HOH C 25 525 524 HOH HOH . VA 4 HOH C 26 526 525 HOH HOH . VA 4 HOH C 27 527 526 HOH HOH . VA 4 HOH C 28 528 527 HOH HOH . VA 4 HOH C 29 529 528 HOH HOH . VA 4 HOH C 30 530 529 HOH HOH . VA 4 HOH C 31 531 530 HOH HOH . VA 4 HOH C 32 532 531 HOH HOH . VA 4 HOH C 33 533 532 HOH HOH . VA 4 HOH C 34 534 511 HOH HOH . VA 4 HOH C 35 535 522 HOH HOH . VA 4 HOH C 36 536 2 HOH HOH . WA 4 HOH D 1 501 501 HOH HOH . WA 4 HOH D 2 502 502 HOH HOH . WA 4 HOH D 3 503 503 HOH HOH . WA 4 HOH D 4 504 504 HOH HOH . WA 4 HOH D 5 505 505 HOH HOH . WA 4 HOH D 6 506 506 HOH HOH . WA 4 HOH D 7 507 507 HOH HOH . WA 4 HOH D 8 508 510 HOH HOH . WA 4 HOH D 9 509 512 HOH HOH . WA 4 HOH D 10 510 513 HOH HOH . WA 4 HOH D 11 511 514 HOH HOH . WA 4 HOH D 12 512 515 HOH HOH . WA 4 HOH D 13 513 516 HOH HOH . WA 4 HOH D 14 514 517 HOH HOH . WA 4 HOH D 15 515 518 HOH HOH . WA 4 HOH D 16 516 519 HOH HOH . WA 4 HOH D 17 517 523 HOH HOH . WA 4 HOH D 18 518 524 HOH HOH . WA 4 HOH D 19 519 525 HOH HOH . WA 4 HOH D 20 520 526 HOH HOH . WA 4 HOH D 21 521 527 HOH HOH . WA 4 HOH D 22 522 503 HOH HOH . WA 4 HOH D 23 523 536 HOH HOH . XA 4 HOH E 1 501 516 HOH HOH . XA 4 HOH E 2 502 508 HOH HOH . XA 4 HOH E 3 503 509 HOH HOH . XA 4 HOH E 4 504 520 HOH HOH . XA 4 HOH E 5 505 521 HOH HOH . XA 4 HOH E 6 506 501 HOH HOH . XA 4 HOH E 7 507 502 HOH HOH . XA 4 HOH E 8 508 504 HOH HOH . XA 4 HOH E 9 509 505 HOH HOH . XA 4 HOH E 10 510 506 HOH HOH . XA 4 HOH E 11 511 507 HOH HOH . XA 4 HOH E 12 512 508 HOH HOH . XA 4 HOH E 13 513 509 HOH HOH . XA 4 HOH E 14 514 510 HOH HOH . XA 4 HOH E 15 515 511 HOH HOH . XA 4 HOH E 16 516 512 HOH HOH . XA 4 HOH E 17 517 513 HOH HOH . XA 4 HOH E 18 518 514 HOH HOH . XA 4 HOH E 19 519 515 HOH HOH . XA 4 HOH E 20 520 516 HOH HOH . XA 4 HOH E 21 521 517 HOH HOH . XA 4 HOH E 22 522 518 HOH HOH . XA 4 HOH E 23 523 519 HOH HOH . XA 4 HOH E 24 524 520 HOH HOH . XA 4 HOH E 25 525 521 HOH HOH . XA 4 HOH E 26 526 522 HOH HOH . XA 4 HOH E 27 527 523 HOH HOH . XA 4 HOH E 28 528 524 HOH HOH . XA 4 HOH E 29 529 525 HOH HOH . XA 4 HOH E 30 530 526 HOH HOH . XA 4 HOH E 31 531 527 HOH HOH . XA 4 HOH E 32 532 528 HOH HOH . XA 4 HOH E 33 533 529 HOH HOH . XA 4 HOH E 34 534 530 HOH HOH . XA 4 HOH E 35 535 531 HOH HOH . XA 4 HOH E 36 536 532 HOH HOH . XA 4 HOH E 37 537 533 HOH HOH . XA 4 HOH E 38 538 534 HOH HOH . XA 4 HOH E 39 539 535 HOH HOH . XA 4 HOH E 40 540 537 HOH HOH . XA 4 HOH E 41 541 538 HOH HOH . XA 4 HOH E 42 542 539 HOH HOH . XA 4 HOH E 43 543 540 HOH HOH . XA 4 HOH E 44 544 541 HOH HOH . XA 4 HOH E 45 545 542 HOH HOH . XA 4 HOH E 46 546 543 HOH HOH . XA 4 HOH E 47 547 544 HOH HOH . XA 4 HOH E 48 548 545 HOH HOH . XA 4 HOH E 49 549 547 HOH HOH . XA 4 HOH E 50 550 549 HOH HOH . XA 4 HOH E 51 551 551 HOH HOH . XA 4 HOH E 52 552 552 HOH HOH . XA 4 HOH E 53 553 553 HOH HOH . XA 4 HOH E 54 554 554 HOH HOH . XA 4 HOH E 55 555 555 HOH HOH . XA 4 HOH E 56 556 556 HOH HOH . XA 4 HOH E 57 557 557 HOH HOH . XA 4 HOH E 58 558 558 HOH HOH . XA 4 HOH E 59 559 559 HOH HOH . XA 4 HOH E 60 560 560 HOH HOH . XA 4 HOH E 61 561 561 HOH HOH . XA 4 HOH E 62 562 562 HOH HOH . XA 4 HOH E 63 563 1 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id NA _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.02 _atom_site.Cartn_y -26.596 _atom_site.Cartn_z 5.553 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 406 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #