data_4EVC # _model_server_result.job_id Kb65ddFO8dYgP9DP1wQuPw _model_server_result.datetime_utc '2024-10-10 08:15:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4evc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":208}' # _entry.id 4EVC # _exptl.entry_id 4EVC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EVC _cell.length_a 186.711 _cell.length_b 186.711 _cell.length_c 186.711 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EVC _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 28_555 x,-y+1/2,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 93.3555 93.3555 5 'crystal symmetry operation' 30_555 z,-x+1/2,-y+1/2 0 0 1 -1 0 0 0 -1 0 0 93.3555 93.3555 6 'crystal symmetry operation' 35_555 y,-z+1/2,-x+1/2 0 1 0 0 0 -1 -1 0 0 0 93.3555 93.3555 7 'crystal symmetry operation' 51_555 -x+1/2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 93.3555 0 93.3555 8 'crystal symmetry operation' 56_555 -z+1/2,x,-y+1/2 0 0 -1 1 0 0 0 -1 0 93.3555 0 93.3555 9 'crystal symmetry operation' 58_555 -y+1/2,z,-x+1/2 0 -1 0 0 0 1 -1 0 0 93.3555 0 93.3555 10 'crystal symmetry operation' 74_555 -x+1/2,-y+1/2,z -1 0 0 0 -1 0 0 0 1 93.3555 93.3555 0 11 'crystal symmetry operation' 79_555 -z+1/2,-x+1/2,y 0 0 -1 -1 0 0 0 1 0 93.3555 93.3555 0 12 'crystal symmetry operation' 84_555 -y+1/2,-z+1/2,x 0 -1 0 0 0 -1 1 0 0 93.3555 93.3555 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 29 A HIS 9 1_555 G CD CD . A CD 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc2 A NE2 HIS 45 A HIS 25 1_555 B CD CD . A CD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc3 A NE2 HIS 57 A HIS 37 1_555 C CD CD . A CD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc4 A OE2 GLU 62 A GLU 42 1_555 I CD CD . A CD 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc5 A OE1 GLU 65 A GLU 45 1_555 I CD CD . A CD 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc6 A OD2 ASP 69 A ASP 49 1_555 F CD CD . A CD 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc7 A OD2 ASP 73 A ASP 53 1_555 F CD CD . A CD 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc8 A ND1 HIS 83 A HIS 63 1_555 L CD CD . A CD 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc9 A NE2 HIS 83 A HIS 63 1_555 M CD CD . A CD 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc10 A NE2 HIS 84 A HIS 64 1_555 N CD CD . A CD 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc11 A OD2 ASP 110 A ASP 90 1_555 K CD CD . A CD 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc12 A OE1 GLU 114 A GLU 94 1_555 E CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc13 A OE1 GLU 117 A GLU 97 1_555 E CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc14 A OE2 GLU 117 A GLU 97 1_555 E CD CD . A CD 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc15 A ND1 HIS 121 A HIS 101 1_555 D CD CD . A CD 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc16 A OE2 GLU 125 A GLU 105 1_555 J CD CD . A CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc17 A OE1 GLU 128 A GLU 108 1_555 J CD CD . A CD 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc18 A O ALA 164 A ALA 144 1_555 H CD CD . A CD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc19 A OXT ALA 164 A ALA 144 1_555 H CD CD . A CD 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc20 B CD CD . A CD 201 1_555 O O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc21 B CD CD . A CD 201 1_555 O O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc22 C CD CD . A CD 202 1_555 O O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc23 C CD CD . A CD 202 1_555 O O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc24 D CD CD . A CD 203 1_555 O O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc25 D CD CD . A CD 203 1_555 O O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc26 D CD CD . A CD 203 1_555 O O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc27 D CD CD . A CD 203 1_555 O O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc28 E CD CD . A CD 204 1_555 O O HOH . A HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc29 E CD CD . A CD 204 1_555 O O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc30 F CD CD . A CD 205 1_555 O O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? metalc ? metalc31 F CD CD . A CD 205 1_555 O O HOH . A HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc32 G CD CD . A CD 206 1_555 O O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc33 G CD CD . A CD 206 1_555 O O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc34 G CD CD . A CD 206 1_555 O O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc35 H CD CD . A CD 207 1_555 O O HOH . A HOH 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc36 H CD CD . A CD 207 1_555 O O HOH . A HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc37 I CD CD . A CD 208 1_555 O O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? metalc ? metalc38 I CD CD . A CD 208 1_555 O O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc39 J CD CD . A CD 209 1_555 O O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.859 ? metalc ? metalc40 J CD CD . A CD 209 1_555 O O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc41 K CD CD . A CD 210 1_555 O O HOH . A HOH 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc42 K CD CD . A CD 210 1_555 O O HOH . A HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? metalc ? metalc43 K CD CD . A CD 210 1_555 O O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc44 L CD CD . A CD 211 1_555 O O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc45 L CD CD . A CD 211 1_555 O O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc46 M CD CD . A CD 212 1_555 O O HOH . A HOH 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc47 M CD CD . A CD 212 1_555 O O HOH . A HOH 329 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? metalc ? metalc48 N CD CD . A CD 213 1_555 O O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc49 N CD CD . A CD 213 1_555 O O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc50 N CD CD . A CD 213 1_555 O O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EVC _atom_sites.fract_transf_matrix[1][1] 0.005356 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005356 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 201 201 CD CD . C 2 CD A 1 202 202 CD CD . D 2 CD A 1 203 203 CD CD . E 2 CD A 1 204 204 CD CD . F 2 CD A 1 205 205 CD CD . G 2 CD A 1 206 206 CD CD . H 2 CD A 1 207 207 CD CD . I 2 CD A 1 208 208 CD CD . J 2 CD A 1 209 209 CD CD . K 2 CD A 1 210 210 CD CD . L 2 CD A 1 211 211 CD CD . M 2 CD A 1 212 212 CD CD . N 2 CD A 1 213 213 CD CD . O 3 HOH A 1 301 301 HOH HOH . O 3 HOH A 2 302 302 HOH HOH . O 3 HOH A 3 303 303 HOH HOH . O 3 HOH A 4 304 304 HOH HOH . O 3 HOH A 5 305 305 HOH HOH . O 3 HOH A 6 306 306 HOH HOH . O 3 HOH A 7 307 307 HOH HOH . O 3 HOH A 8 308 308 HOH HOH . O 3 HOH A 9 309 309 HOH HOH . O 3 HOH A 10 310 310 HOH HOH . O 3 HOH A 11 311 311 HOH HOH . O 3 HOH A 12 312 312 HOH HOH . O 3 HOH A 13 313 313 HOH HOH . O 3 HOH A 14 314 314 HOH HOH . O 3 HOH A 15 315 315 HOH HOH . O 3 HOH A 16 316 316 HOH HOH . O 3 HOH A 17 317 317 HOH HOH . O 3 HOH A 18 318 318 HOH HOH . O 3 HOH A 19 319 319 HOH HOH . O 3 HOH A 20 320 320 HOH HOH . O 3 HOH A 21 321 321 HOH HOH . O 3 HOH A 22 322 322 HOH HOH . O 3 HOH A 23 323 323 HOH HOH . O 3 HOH A 24 324 324 HOH HOH . O 3 HOH A 25 325 325 HOH HOH . O 3 HOH A 26 326 326 HOH HOH . O 3 HOH A 27 327 327 HOH HOH . O 3 HOH A 28 328 328 HOH HOH . O 3 HOH A 29 329 329 HOH HOH . O 3 HOH A 30 330 330 HOH HOH . O 3 HOH A 31 331 331 HOH HOH . O 3 HOH A 32 332 332 HOH HOH . O 3 HOH A 33 333 333 HOH HOH . O 3 HOH A 34 334 334 HOH HOH . O 3 HOH A 35 335 335 HOH HOH . O 3 HOH A 36 336 336 HOH HOH . O 3 HOH A 37 337 337 HOH HOH . O 3 HOH A 38 338 338 HOH HOH . O 3 HOH A 39 339 339 HOH HOH . O 3 HOH A 40 340 340 HOH HOH . O 3 HOH A 41 341 341 HOH HOH . O 3 HOH A 42 342 342 HOH HOH . O 3 HOH A 43 343 343 HOH HOH . O 3 HOH A 44 344 344 HOH HOH . O 3 HOH A 45 345 345 HOH HOH . O 3 HOH A 46 346 346 HOH HOH . O 3 HOH A 47 347 347 HOH HOH . O 3 HOH A 48 348 348 HOH HOH . O 3 HOH A 49 349 349 HOH HOH . O 3 HOH A 50 350 350 HOH HOH . O 3 HOH A 51 351 351 HOH HOH . O 3 HOH A 52 352 352 HOH HOH . O 3 HOH A 53 353 353 HOH HOH . O 3 HOH A 54 354 354 HOH HOH . O 3 HOH A 55 355 355 HOH HOH . O 3 HOH A 56 356 356 HOH HOH . O 3 HOH A 57 357 357 HOH HOH . O 3 HOH A 58 358 358 HOH HOH . O 3 HOH A 59 359 359 HOH HOH . O 3 HOH A 60 360 360 HOH HOH . O 3 HOH A 61 361 361 HOH HOH . O 3 HOH A 62 362 362 HOH HOH . O 3 HOH A 63 363 363 HOH HOH . O 3 HOH A 64 364 364 HOH HOH . O 3 HOH A 65 365 365 HOH HOH . O 3 HOH A 66 366 366 HOH HOH . O 3 HOH A 67 367 367 HOH HOH . O 3 HOH A 68 368 368 HOH HOH . O 3 HOH A 69 369 369 HOH HOH . O 3 HOH A 70 370 370 HOH HOH . O 3 HOH A 71 371 371 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 42.127 _atom_site.Cartn_y 50.698 _atom_site.Cartn_z 29.656 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 45.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 208 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #