data_4EWQ # _model_server_result.job_id 6skpqM4sGZZqlZRvmdm5Bg _model_server_result.datetime_utc '2024-11-10 01:22:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ewq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 4EWQ # _exptl.entry_id 4EWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EWQ _cell.length_a 65.257 _cell.length_b 74.276 _cell.length_c 76.815 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 185 A CYS 162 1_555 G S2 BME . A BME 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? covale ? covale2 A C MET 202 A MET 179 1_555 A N TPO 203 A TPO 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C TPO 203 A TPO 180 1_555 A N GLY 204 A GLY 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A NE2 HIS 87 A HIS 64 1_555 E ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc2 A OE1 GLU 201 A GLU 178 1_555 E ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.844 ? metalc ? metalc3 A O1P TPO 203 A TPO 180 1_555 E ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 174 n n C1 C2 GOL sing 175 n n C1 H11 GOL sing 176 n n C1 H12 GOL sing 177 n n O1 HO1 GOL sing 178 n n C2 O2 GOL sing 179 n n C2 C3 GOL sing 180 n n C2 H2 GOL sing 181 n n O2 HO2 GOL sing 182 n n C3 O3 GOL sing 183 n n C3 H31 GOL sing 184 n n C3 H32 GOL sing 185 n n O3 HO3 GOL sing 186 n n # _atom_sites.entry_id 4EWQ _atom_sites.fract_transf_matrix[1][1] 0.015324 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013018 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GG5 A 1 401 1 GG5 GG5 . C 3 MWL A 1 402 2 MWL MWL . D 3 MWL A 1 403 3 MWL MWL . E 4 ZN A 1 404 4 ZN ZN . F 5 CL A 1 405 5 CL CL . G 6 BME A 1 406 6 BME BME . H 7 GOL A 1 407 7 GOL GOL . I 8 ACT A 1 408 8 ACT ACT . J 9 PEG A 1 409 9 PEG PEG . K 10 HOH A 1 501 10 HOH HOH . K 10 HOH A 2 502 11 HOH HOH . K 10 HOH A 3 503 12 HOH HOH . K 10 HOH A 4 504 13 HOH HOH . K 10 HOH A 5 505 14 HOH HOH . K 10 HOH A 6 506 15 HOH HOH . K 10 HOH A 7 507 16 HOH HOH . K 10 HOH A 8 508 17 HOH HOH . K 10 HOH A 9 509 18 HOH HOH . K 10 HOH A 10 510 19 HOH HOH . K 10 HOH A 11 511 20 HOH HOH . K 10 HOH A 12 512 21 HOH HOH . K 10 HOH A 13 513 22 HOH HOH . K 10 HOH A 14 514 23 HOH HOH . K 10 HOH A 15 515 24 HOH HOH . K 10 HOH A 16 516 25 HOH HOH . K 10 HOH A 17 517 26 HOH HOH . K 10 HOH A 18 518 27 HOH HOH . K 10 HOH A 19 519 28 HOH HOH . K 10 HOH A 20 520 29 HOH HOH . K 10 HOH A 21 521 30 HOH HOH . K 10 HOH A 22 522 31 HOH HOH . K 10 HOH A 23 523 32 HOH HOH . K 10 HOH A 24 524 33 HOH HOH . K 10 HOH A 25 525 34 HOH HOH . K 10 HOH A 26 526 35 HOH HOH . K 10 HOH A 27 527 36 HOH HOH . K 10 HOH A 28 528 37 HOH HOH . K 10 HOH A 29 529 38 HOH HOH . K 10 HOH A 30 530 39 HOH HOH . K 10 HOH A 31 531 40 HOH HOH . K 10 HOH A 32 532 41 HOH HOH . K 10 HOH A 33 533 42 HOH HOH . K 10 HOH A 34 534 43 HOH HOH . K 10 HOH A 35 535 44 HOH HOH . K 10 HOH A 36 536 45 HOH HOH . K 10 HOH A 37 537 46 HOH HOH . K 10 HOH A 38 538 47 HOH HOH . K 10 HOH A 39 539 48 HOH HOH . K 10 HOH A 40 540 49 HOH HOH . K 10 HOH A 41 541 50 HOH HOH . K 10 HOH A 42 542 51 HOH HOH . K 10 HOH A 43 543 52 HOH HOH . K 10 HOH A 44 544 53 HOH HOH . K 10 HOH A 45 545 54 HOH HOH . K 10 HOH A 46 546 55 HOH HOH . K 10 HOH A 47 547 56 HOH HOH . K 10 HOH A 48 548 57 HOH HOH . K 10 HOH A 49 549 58 HOH HOH . K 10 HOH A 50 550 59 HOH HOH . K 10 HOH A 51 551 60 HOH HOH . K 10 HOH A 52 552 61 HOH HOH . K 10 HOH A 53 553 62 HOH HOH . K 10 HOH A 54 554 63 HOH HOH . K 10 HOH A 55 555 64 HOH HOH . K 10 HOH A 56 556 65 HOH HOH . K 10 HOH A 57 557 66 HOH HOH . K 10 HOH A 58 558 67 HOH HOH . K 10 HOH A 59 559 68 HOH HOH . K 10 HOH A 60 560 69 HOH HOH . K 10 HOH A 61 561 70 HOH HOH . K 10 HOH A 62 562 71 HOH HOH . K 10 HOH A 63 563 72 HOH HOH . K 10 HOH A 64 564 73 HOH HOH . K 10 HOH A 65 565 74 HOH HOH . K 10 HOH A 66 566 75 HOH HOH . K 10 HOH A 67 567 76 HOH HOH . K 10 HOH A 68 568 77 HOH HOH . K 10 HOH A 69 569 78 HOH HOH . K 10 HOH A 70 570 79 HOH HOH . K 10 HOH A 71 571 80 HOH HOH . K 10 HOH A 72 572 81 HOH HOH . K 10 HOH A 73 573 82 HOH HOH . K 10 HOH A 74 574 83 HOH HOH . K 10 HOH A 75 575 84 HOH HOH . K 10 HOH A 76 576 85 HOH HOH . K 10 HOH A 77 577 86 HOH HOH . K 10 HOH A 78 578 87 HOH HOH . K 10 HOH A 79 579 88 HOH HOH . K 10 HOH A 80 580 89 HOH HOH . K 10 HOH A 81 581 90 HOH HOH . K 10 HOH A 82 582 91 HOH HOH . K 10 HOH A 83 583 92 HOH HOH . K 10 HOH A 84 584 93 HOH HOH . K 10 HOH A 85 585 94 HOH HOH . K 10 HOH A 86 586 95 HOH HOH . K 10 HOH A 87 587 96 HOH HOH . K 10 HOH A 88 588 97 HOH HOH . K 10 HOH A 89 589 98 HOH HOH . K 10 HOH A 90 590 99 HOH HOH . K 10 HOH A 91 591 100 HOH HOH . K 10 HOH A 92 592 101 HOH HOH . K 10 HOH A 93 593 102 HOH HOH . K 10 HOH A 94 594 103 HOH HOH . K 10 HOH A 95 595 104 HOH HOH . K 10 HOH A 96 596 105 HOH HOH . K 10 HOH A 97 597 106 HOH HOH . K 10 HOH A 98 598 107 HOH HOH . K 10 HOH A 99 599 108 HOH HOH . K 10 HOH A 100 600 109 HOH HOH . K 10 HOH A 101 601 110 HOH HOH . K 10 HOH A 102 602 111 HOH HOH . K 10 HOH A 103 603 112 HOH HOH . K 10 HOH A 104 604 113 HOH HOH . K 10 HOH A 105 605 114 HOH HOH . K 10 HOH A 106 606 115 HOH HOH . K 10 HOH A 107 607 116 HOH HOH . K 10 HOH A 108 608 117 HOH HOH . K 10 HOH A 109 609 118 HOH HOH . K 10 HOH A 110 610 119 HOH HOH . K 10 HOH A 111 611 120 HOH HOH . K 10 HOH A 112 612 121 HOH HOH . K 10 HOH A 113 613 122 HOH HOH . K 10 HOH A 114 614 123 HOH HOH . K 10 HOH A 115 615 124 HOH HOH . K 10 HOH A 116 616 125 HOH HOH . K 10 HOH A 117 617 126 HOH HOH . K 10 HOH A 118 618 127 HOH HOH . K 10 HOH A 119 619 128 HOH HOH . K 10 HOH A 120 620 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 7 35.307 0.247 20.965 1 61.2 ? C1 GOL 407 A 1 HETATM 2 O O1 GOL . . . H 7 34.047 0.875 21.16 1 58.26 ? O1 GOL 407 A 1 HETATM 3 C C2 GOL . . . H 7 35.186 -1.281 20.854 1 60.14 ? C2 GOL 407 A 1 HETATM 4 O O2 GOL . . . H 7 36.477 -1.855 20.912 1 62.83 ? O2 GOL 407 A 1 HETATM 5 C C3 GOL . . . H 7 34.371 -1.881 21.99 1 56.86 ? C3 GOL 407 A 1 HETATM 6 O O3 GOL . . . H 7 34.882 -1.422 23.216 1 54.86 ? O3 GOL 407 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #