data_4EX1 # _model_server_result.job_id 2xUdMRhxGMcdd8iBToimcg _model_server_result.datetime_utc '2024-11-14 17:44:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ex1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":101}' # _entry.id 4EX1 # _exptl.entry_id 4EX1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4EX1 _cell.length_a 80.67 _cell.length_b 80.67 _cell.length_c 33.21 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EX1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc2 D NE2 HIS 10 D HIS 10 1_555 G ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EX1 _atom_sites.fract_transf_matrix[1][1] 0.012396 _atom_sites.fract_transf_matrix[1][2] 0.007157 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN B 1 101 2 ZN ZN . F 4 CL B 1 102 1 CL CL . G 3 ZN D 1 101 1 ZN ZN . H 4 CL D 1 102 1 CL CL . I 5 HOH A 1 101 5 HOH HOH . I 5 HOH A 2 102 6 HOH HOH . I 5 HOH A 3 103 12 HOH HOH . I 5 HOH A 4 104 14 HOH HOH . I 5 HOH A 5 105 17 HOH HOH . I 5 HOH A 6 106 19 HOH HOH . I 5 HOH A 7 107 20 HOH HOH . I 5 HOH A 8 108 21 HOH HOH . I 5 HOH A 9 109 29 HOH HOH . I 5 HOH A 10 110 33 HOH HOH . I 5 HOH A 11 111 46 HOH HOH . I 5 HOH A 12 112 48 HOH HOH . I 5 HOH A 13 113 58 HOH HOH . I 5 HOH A 14 114 65 HOH HOH . I 5 HOH A 15 115 81 HOH HOH . I 5 HOH A 16 116 92 HOH HOH . I 5 HOH A 17 117 96 HOH HOH . I 5 HOH A 18 118 98 HOH HOH . I 5 HOH A 19 119 102 HOH HOH . I 5 HOH A 20 120 113 HOH HOH . I 5 HOH A 21 121 120 HOH HOH . I 5 HOH A 22 122 141 HOH HOH . I 5 HOH A 23 123 148 HOH HOH . I 5 HOH A 24 124 150 HOH HOH . I 5 HOH A 25 125 154 HOH HOH . J 5 HOH B 1 201 1 HOH HOH . J 5 HOH B 2 202 3 HOH HOH . J 5 HOH B 3 203 7 HOH HOH . J 5 HOH B 4 204 8 HOH HOH . J 5 HOH B 5 205 16 HOH HOH . J 5 HOH B 6 206 18 HOH HOH . J 5 HOH B 7 207 27 HOH HOH . J 5 HOH B 8 208 31 HOH HOH . J 5 HOH B 9 209 32 HOH HOH . J 5 HOH B 10 210 34 HOH HOH . J 5 HOH B 11 211 44 HOH HOH . J 5 HOH B 12 212 45 HOH HOH . J 5 HOH B 13 213 49 HOH HOH . J 5 HOH B 14 214 50 HOH HOH . J 5 HOH B 15 215 51 HOH HOH . J 5 HOH B 16 216 55 HOH HOH . J 5 HOH B 17 217 59 HOH HOH . J 5 HOH B 18 218 62 HOH HOH . J 5 HOH B 19 219 73 HOH HOH . J 5 HOH B 20 220 75 HOH HOH . J 5 HOH B 21 221 76 HOH HOH . J 5 HOH B 22 222 79 HOH HOH . J 5 HOH B 23 223 100 HOH HOH . J 5 HOH B 24 224 106 HOH HOH . J 5 HOH B 25 225 107 HOH HOH . J 5 HOH B 26 226 119 HOH HOH . J 5 HOH B 27 227 133 HOH HOH . J 5 HOH B 28 228 136 HOH HOH . J 5 HOH B 29 229 138 HOH HOH . J 5 HOH B 30 230 144 HOH HOH . J 5 HOH B 31 231 153 HOH HOH . J 5 HOH B 32 232 159 HOH HOH . J 5 HOH B 33 233 162 HOH HOH . K 5 HOH C 1 101 2 HOH HOH . K 5 HOH C 2 102 4 HOH HOH . K 5 HOH C 3 103 13 HOH HOH . K 5 HOH C 4 104 15 HOH HOH . K 5 HOH C 5 105 22 HOH HOH . K 5 HOH C 6 106 37 HOH HOH . K 5 HOH C 7 107 39 HOH HOH . K 5 HOH C 8 108 68 HOH HOH . K 5 HOH C 9 109 71 HOH HOH . K 5 HOH C 10 110 74 HOH HOH . K 5 HOH C 11 111 95 HOH HOH . K 5 HOH C 12 112 97 HOH HOH . K 5 HOH C 13 113 101 HOH HOH . K 5 HOH C 14 114 109 HOH HOH . K 5 HOH C 15 115 117 HOH HOH . K 5 HOH C 16 116 121 HOH HOH . K 5 HOH C 17 117 124 HOH HOH . K 5 HOH C 18 118 128 HOH HOH . K 5 HOH C 19 119 131 HOH HOH . K 5 HOH C 20 120 139 HOH HOH . K 5 HOH C 21 121 140 HOH HOH . K 5 HOH C 22 122 145 HOH HOH . K 5 HOH C 23 123 146 HOH HOH . K 5 HOH C 24 124 147 HOH HOH . K 5 HOH C 25 125 151 HOH HOH . L 5 HOH D 1 201 9 HOH HOH . L 5 HOH D 2 202 10 HOH HOH . L 5 HOH D 3 203 11 HOH HOH . L 5 HOH D 4 204 23 HOH HOH . L 5 HOH D 5 205 25 HOH HOH . L 5 HOH D 6 206 26 HOH HOH . L 5 HOH D 7 207 28 HOH HOH . L 5 HOH D 8 208 30 HOH HOH . L 5 HOH D 9 209 35 HOH HOH . L 5 HOH D 10 210 36 HOH HOH . L 5 HOH D 11 211 38 HOH HOH . L 5 HOH D 12 212 40 HOH HOH . L 5 HOH D 13 213 41 HOH HOH . L 5 HOH D 14 214 43 HOH HOH . L 5 HOH D 15 215 47 HOH HOH . L 5 HOH D 16 216 53 HOH HOH . L 5 HOH D 17 217 56 HOH HOH . L 5 HOH D 18 218 57 HOH HOH . L 5 HOH D 19 219 67 HOH HOH . L 5 HOH D 20 220 72 HOH HOH . L 5 HOH D 21 221 80 HOH HOH . L 5 HOH D 22 222 86 HOH HOH . L 5 HOH D 23 223 108 HOH HOH . L 5 HOH D 24 224 118 HOH HOH . L 5 HOH D 25 225 122 HOH HOH . L 5 HOH D 26 226 123 HOH HOH . L 5 HOH D 27 227 132 HOH HOH . L 5 HOH D 28 228 134 HOH HOH . L 5 HOH D 29 229 135 HOH HOH . L 5 HOH D 30 230 142 HOH HOH . L 5 HOH D 31 231 156 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -0.097 _atom_site.Cartn_y -0.231 _atom_site.Cartn_z 3.689 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 16.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 214 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #