data_4EXH # _model_server_result.job_id tRQpsOhus0DdEjPTsJudhw _model_server_result.datetime_utc '2025-01-19 05:16:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4exh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 4EXH # _exptl.entry_id 4EXH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EXH _cell.length_a 46.314 _cell.length_b 65.21 _cell.length_c 69.468 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EXH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,F,G,H 1 1 A,B,E,G,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ACE 1 J ACE 1 1_555 C N VAL 2 J VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 C C VAL 3 J VAL 3 1_555 C N STA 4 J STA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale3 C C STA 4 J STA 4 1_555 C N ALA 5 J ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 D C ACE 1 M ACE 1 1_555 D N VAL 2 M VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 sing covale ? covale5 D C VAL 3 M VAL 3 1_555 D N STA 4 M STA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 sing covale ? covale6 D C STA 4 M STA 4 1_555 D N ALA 5 M ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 sing covale ? covale7 E C ACE 1 P ACE 1 1_555 E N VAL 2 P VAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale8 E C VAL 3 P VAL 3 1_555 E N STA 4 P STA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale9 E C STA 4 P STA 4 1_555 E N ALA 5 P ALA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? covale ? covale10 E C ALA 5 P ALA 5 1_555 E N STA 6 P STA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 89 n n C O2 FMT sing 90 n n C H FMT sing 91 n n O2 HO2 FMT sing 92 n n # _atom_sites.entry_id 4EXH _atom_sites.fract_transf_matrix[1][1] 0.021592 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015335 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 FMT M 1 101 1 FMT FMT . G 4 HOH A 1 201 6 HOH HOH . G 4 HOH A 2 202 9 HOH HOH . G 4 HOH A 3 203 12 HOH HOH . G 4 HOH A 4 204 14 HOH HOH . G 4 HOH A 5 205 15 HOH HOH . G 4 HOH A 6 206 17 HOH HOH . G 4 HOH A 7 207 18 HOH HOH . G 4 HOH A 8 208 20 HOH HOH . G 4 HOH A 9 209 22 HOH HOH . G 4 HOH A 10 210 26 HOH HOH . G 4 HOH A 11 211 27 HOH HOH . G 4 HOH A 12 212 28 HOH HOH . G 4 HOH A 13 213 29 HOH HOH . G 4 HOH A 14 214 31 HOH HOH . G 4 HOH A 15 215 32 HOH HOH . G 4 HOH A 16 216 34 HOH HOH . G 4 HOH A 17 217 35 HOH HOH . G 4 HOH A 18 218 36 HOH HOH . G 4 HOH A 19 219 37 HOH HOH . G 4 HOH A 20 220 38 HOH HOH . G 4 HOH A 21 221 41 HOH HOH . G 4 HOH A 22 222 42 HOH HOH . G 4 HOH A 23 223 43 HOH HOH . G 4 HOH A 24 224 45 HOH HOH . G 4 HOH A 25 225 47 HOH HOH . H 4 HOH B 1 201 1 HOH HOH . H 4 HOH B 2 202 3 HOH HOH . H 4 HOH B 3 203 4 HOH HOH . H 4 HOH B 4 204 5 HOH HOH . H 4 HOH B 5 205 7 HOH HOH . H 4 HOH B 6 206 8 HOH HOH . H 4 HOH B 7 207 10 HOH HOH . H 4 HOH B 8 208 11 HOH HOH . H 4 HOH B 9 209 13 HOH HOH . H 4 HOH B 10 210 16 HOH HOH . H 4 HOH B 11 211 19 HOH HOH . H 4 HOH B 12 212 21 HOH HOH . H 4 HOH B 13 213 23 HOH HOH . H 4 HOH B 14 214 24 HOH HOH . H 4 HOH B 15 215 25 HOH HOH . H 4 HOH B 16 216 30 HOH HOH . H 4 HOH B 17 217 33 HOH HOH . H 4 HOH B 18 218 39 HOH HOH . H 4 HOH B 19 219 40 HOH HOH . H 4 HOH B 20 220 44 HOH HOH . H 4 HOH B 21 221 46 HOH HOH . I 4 HOH P 1 101 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . F 3 3.054 5.653 21.256 0.5 44.46 ? C FMT 101 M 1 HETATM 2 O O1 FMT . . . F 3 1.918 6.111 21.35 0.5 43.57 ? O1 FMT 101 M 1 HETATM 3 O O2 FMT . . . F 3 4.016 6.26 20.784 0.5 44.58 ? O2 FMT 101 M 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #