data_4EYE # _model_server_result.job_id vUzcCpYRUtamQxbMtfeJFg _model_server_result.datetime_utc '2024-12-26 13:41:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eye # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4EYE # _exptl.entry_id 4EYE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.14 _cell.angle_gamma 90 _cell.entry_id 4EYE _cell.length_a 78.64 _cell.length_b 46.34 _cell.length_c 84.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EYE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,W 1 1 B,O,P,Q,R,S,T,U,V,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 O N N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 237 n n C1 H11 MPD sing 238 n n C1 H12 MPD sing 239 n n C1 H13 MPD sing 240 n n C2 O2 MPD sing 241 n n C2 CM MPD sing 242 n n C2 C3 MPD sing 243 n n O2 HO2 MPD sing 244 n n CM HM1 MPD sing 245 n n CM HM2 MPD sing 246 n n CM HM3 MPD sing 247 n n C3 C4 MPD sing 248 n n C3 H31 MPD sing 249 n n C3 H32 MPD sing 250 n n C4 O4 MPD sing 251 n n C4 C5 MPD sing 252 n n C4 H4 MPD sing 253 n n O4 HO4 MPD sing 254 n n C5 H51 MPD sing 255 n n C5 H52 MPD sing 256 n n C5 H53 MPD sing 257 n n # _atom_sites.entry_id 4EYE _atom_sites.fract_transf_matrix[1][1] 0.012716 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000698 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02158 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPD A 1 401 351 MPD MPD . D 3 IOD A 1 402 1 IOD IOD . E 3 IOD A 1 403 2 IOD IOD . F 3 IOD A 1 404 3 IOD IOD . G 3 IOD A 1 405 5 IOD IOD . H 3 IOD A 1 406 6 IOD IOD . I 3 IOD A 1 407 7 IOD IOD . J 3 IOD A 1 408 8 IOD IOD . K 3 IOD A 1 409 9 IOD IOD . L 3 IOD A 1 410 12 IOD IOD . M 3 IOD A 1 411 13 IOD IOD . N 3 IOD A 1 412 15 IOD IOD . O 2 MPD B 1 401 351 MPD MPD . P 3 IOD B 1 402 4 IOD IOD . Q 3 IOD B 1 403 10 IOD IOD . R 3 IOD B 1 404 11 IOD IOD . S 3 IOD B 1 405 14 IOD IOD . T 3 IOD B 1 406 16 IOD IOD . U 3 IOD B 1 407 17 IOD IOD . V 3 IOD B 1 408 18 IOD IOD . W 4 HOH A 1 501 1 HOH HOH . W 4 HOH A 2 502 3 HOH HOH . W 4 HOH A 3 503 6 HOH HOH . W 4 HOH A 4 504 7 HOH HOH . W 4 HOH A 5 505 8 HOH HOH . W 4 HOH A 6 506 10 HOH HOH . W 4 HOH A 7 507 11 HOH HOH . W 4 HOH A 8 508 13 HOH HOH . W 4 HOH A 9 509 14 HOH HOH . W 4 HOH A 10 510 15 HOH HOH . W 4 HOH A 11 511 16 HOH HOH . W 4 HOH A 12 512 17 HOH HOH . W 4 HOH A 13 513 20 HOH HOH . W 4 HOH A 14 514 21 HOH HOH . W 4 HOH A 15 515 22 HOH HOH . W 4 HOH A 16 516 24 HOH HOH . W 4 HOH A 17 517 26 HOH HOH . W 4 HOH A 18 518 27 HOH HOH . W 4 HOH A 19 519 28 HOH HOH . W 4 HOH A 20 520 29 HOH HOH . W 4 HOH A 21 521 30 HOH HOH . W 4 HOH A 22 522 33 HOH HOH . W 4 HOH A 23 523 34 HOH HOH . W 4 HOH A 24 524 35 HOH HOH . W 4 HOH A 25 525 36 HOH HOH . W 4 HOH A 26 526 37 HOH HOH . W 4 HOH A 27 527 38 HOH HOH . W 4 HOH A 28 528 39 HOH HOH . W 4 HOH A 29 529 40 HOH HOH . W 4 HOH A 30 530 41 HOH HOH . W 4 HOH A 31 531 43 HOH HOH . W 4 HOH A 32 532 44 HOH HOH . W 4 HOH A 33 533 45 HOH HOH . W 4 HOH A 34 534 46 HOH HOH . W 4 HOH A 35 535 47 HOH HOH . W 4 HOH A 36 536 48 HOH HOH . W 4 HOH A 37 537 49 HOH HOH . W 4 HOH A 38 538 52 HOH HOH . W 4 HOH A 39 539 55 HOH HOH . W 4 HOH A 40 540 57 HOH HOH . W 4 HOH A 41 541 58 HOH HOH . W 4 HOH A 42 542 60 HOH HOH . W 4 HOH A 43 543 62 HOH HOH . W 4 HOH A 44 544 63 HOH HOH . W 4 HOH A 45 545 64 HOH HOH . W 4 HOH A 46 546 66 HOH HOH . W 4 HOH A 47 547 67 HOH HOH . W 4 HOH A 48 548 69 HOH HOH . W 4 HOH A 49 549 71 HOH HOH . W 4 HOH A 50 550 72 HOH HOH . W 4 HOH A 51 551 74 HOH HOH . W 4 HOH A 52 552 75 HOH HOH . W 4 HOH A 53 553 76 HOH HOH . W 4 HOH A 54 554 78 HOH HOH . W 4 HOH A 55 555 79 HOH HOH . W 4 HOH A 56 556 81 HOH HOH . W 4 HOH A 57 557 83 HOH HOH . W 4 HOH A 58 558 85 HOH HOH . W 4 HOH A 59 559 86 HOH HOH . W 4 HOH A 60 560 88 HOH HOH . W 4 HOH A 61 561 90 HOH HOH . W 4 HOH A 62 562 92 HOH HOH . W 4 HOH A 63 563 94 HOH HOH . W 4 HOH A 64 564 95 HOH HOH . W 4 HOH A 65 565 96 HOH HOH . W 4 HOH A 66 566 97 HOH HOH . W 4 HOH A 67 567 98 HOH HOH . W 4 HOH A 68 568 101 HOH HOH . W 4 HOH A 69 569 103 HOH HOH . W 4 HOH A 70 570 105 HOH HOH . W 4 HOH A 71 571 107 HOH HOH . W 4 HOH A 72 572 108 HOH HOH . W 4 HOH A 73 573 110 HOH HOH . W 4 HOH A 74 574 111 HOH HOH . W 4 HOH A 75 575 112 HOH HOH . W 4 HOH A 76 576 113 HOH HOH . W 4 HOH A 77 577 114 HOH HOH . W 4 HOH A 78 578 115 HOH HOH . W 4 HOH A 79 579 116 HOH HOH . W 4 HOH A 80 580 117 HOH HOH . W 4 HOH A 81 581 118 HOH HOH . W 4 HOH A 82 582 119 HOH HOH . W 4 HOH A 83 583 120 HOH HOH . W 4 HOH A 84 584 121 HOH HOH . W 4 HOH A 85 585 122 HOH HOH . W 4 HOH A 86 586 123 HOH HOH . W 4 HOH A 87 587 124 HOH HOH . W 4 HOH A 88 588 125 HOH HOH . W 4 HOH A 89 589 126 HOH HOH . W 4 HOH A 90 590 127 HOH HOH . W 4 HOH A 91 591 128 HOH HOH . W 4 HOH A 92 592 129 HOH HOH . W 4 HOH A 93 593 130 HOH HOH . W 4 HOH A 94 594 131 HOH HOH . W 4 HOH A 95 595 132 HOH HOH . W 4 HOH A 96 596 133 HOH HOH . W 4 HOH A 97 597 134 HOH HOH . W 4 HOH A 98 598 135 HOH HOH . W 4 HOH A 99 599 136 HOH HOH . W 4 HOH A 100 600 137 HOH HOH . W 4 HOH A 101 601 138 HOH HOH . W 4 HOH A 102 602 139 HOH HOH . W 4 HOH A 103 603 140 HOH HOH . W 4 HOH A 104 604 141 HOH HOH . W 4 HOH A 105 605 142 HOH HOH . W 4 HOH A 106 606 143 HOH HOH . W 4 HOH A 107 607 144 HOH HOH . W 4 HOH A 108 608 145 HOH HOH . W 4 HOH A 109 609 146 HOH HOH . W 4 HOH A 110 610 147 HOH HOH . W 4 HOH A 111 611 148 HOH HOH . W 4 HOH A 112 612 149 HOH HOH . W 4 HOH A 113 613 150 HOH HOH . W 4 HOH A 114 614 152 HOH HOH . W 4 HOH A 115 615 183 HOH HOH . W 4 HOH A 116 616 184 HOH HOH . W 4 HOH A 117 617 186 HOH HOH . W 4 HOH A 118 618 187 HOH HOH . W 4 HOH A 119 619 188 HOH HOH . W 4 HOH A 120 620 189 HOH HOH . W 4 HOH A 121 621 190 HOH HOH . W 4 HOH A 122 622 191 HOH HOH . W 4 HOH A 123 623 192 HOH HOH . W 4 HOH A 124 624 193 HOH HOH . W 4 HOH A 125 625 194 HOH HOH . W 4 HOH A 126 626 195 HOH HOH . W 4 HOH A 127 627 196 HOH HOH . W 4 HOH A 128 628 197 HOH HOH . W 4 HOH A 129 629 198 HOH HOH . W 4 HOH A 130 630 199 HOH HOH . W 4 HOH A 131 631 200 HOH HOH . W 4 HOH A 132 632 201 HOH HOH . W 4 HOH A 133 633 202 HOH HOH . W 4 HOH A 134 634 203 HOH HOH . W 4 HOH A 135 635 205 HOH HOH . W 4 HOH A 136 636 206 HOH HOH . W 4 HOH A 137 637 207 HOH HOH . W 4 HOH A 138 638 208 HOH HOH . W 4 HOH A 139 639 209 HOH HOH . W 4 HOH A 140 640 210 HOH HOH . W 4 HOH A 141 641 211 HOH HOH . W 4 HOH A 142 642 212 HOH HOH . W 4 HOH A 143 643 213 HOH HOH . W 4 HOH A 144 644 214 HOH HOH . W 4 HOH A 145 645 215 HOH HOH . W 4 HOH A 146 646 216 HOH HOH . W 4 HOH A 147 647 217 HOH HOH . W 4 HOH A 148 648 218 HOH HOH . W 4 HOH A 149 649 219 HOH HOH . W 4 HOH A 150 650 220 HOH HOH . W 4 HOH A 151 651 221 HOH HOH . W 4 HOH A 152 652 222 HOH HOH . W 4 HOH A 153 653 223 HOH HOH . W 4 HOH A 154 654 224 HOH HOH . W 4 HOH A 155 655 225 HOH HOH . W 4 HOH A 156 656 226 HOH HOH . W 4 HOH A 157 657 227 HOH HOH . W 4 HOH A 158 658 228 HOH HOH . W 4 HOH A 159 659 229 HOH HOH . W 4 HOH A 160 660 230 HOH HOH . W 4 HOH A 161 661 231 HOH HOH . W 4 HOH A 162 662 232 HOH HOH . W 4 HOH A 163 663 233 HOH HOH . W 4 HOH A 164 664 234 HOH HOH . W 4 HOH A 165 665 235 HOH HOH . W 4 HOH A 166 666 236 HOH HOH . W 4 HOH A 167 667 237 HOH HOH . W 4 HOH A 168 668 238 HOH HOH . W 4 HOH A 169 669 239 HOH HOH . W 4 HOH A 170 670 251 HOH HOH . W 4 HOH A 171 671 252 HOH HOH . W 4 HOH A 172 672 253 HOH HOH . W 4 HOH A 173 673 264 HOH HOH . W 4 HOH A 174 674 265 HOH HOH . W 4 HOH A 175 675 266 HOH HOH . W 4 HOH A 176 676 267 HOH HOH . W 4 HOH A 177 677 268 HOH HOH . W 4 HOH A 178 678 269 HOH HOH . W 4 HOH A 179 679 270 HOH HOH . W 4 HOH A 180 680 271 HOH HOH . W 4 HOH A 181 681 272 HOH HOH . W 4 HOH A 182 682 273 HOH HOH . W 4 HOH A 183 683 274 HOH HOH . W 4 HOH A 184 684 275 HOH HOH . W 4 HOH A 185 685 276 HOH HOH . W 4 HOH A 186 686 277 HOH HOH . W 4 HOH A 187 687 278 HOH HOH . W 4 HOH A 188 688 279 HOH HOH . W 4 HOH A 189 689 280 HOH HOH . W 4 HOH A 190 690 281 HOH HOH . X 4 HOH B 1 501 2 HOH HOH . X 4 HOH B 2 502 4 HOH HOH . X 4 HOH B 3 503 5 HOH HOH . X 4 HOH B 4 504 9 HOH HOH . X 4 HOH B 5 505 12 HOH HOH . X 4 HOH B 6 506 18 HOH HOH . X 4 HOH B 7 507 19 HOH HOH . X 4 HOH B 8 508 23 HOH HOH . X 4 HOH B 9 509 25 HOH HOH . X 4 HOH B 10 510 31 HOH HOH . X 4 HOH B 11 511 32 HOH HOH . X 4 HOH B 12 512 42 HOH HOH . X 4 HOH B 13 513 50 HOH HOH . X 4 HOH B 14 514 51 HOH HOH . X 4 HOH B 15 515 53 HOH HOH . X 4 HOH B 16 516 54 HOH HOH . X 4 HOH B 17 517 56 HOH HOH . X 4 HOH B 18 518 59 HOH HOH . X 4 HOH B 19 519 61 HOH HOH . X 4 HOH B 20 520 65 HOH HOH . X 4 HOH B 21 521 68 HOH HOH . X 4 HOH B 22 522 70 HOH HOH . X 4 HOH B 23 523 73 HOH HOH . X 4 HOH B 24 524 77 HOH HOH . X 4 HOH B 25 525 80 HOH HOH . X 4 HOH B 26 526 82 HOH HOH . X 4 HOH B 27 527 84 HOH HOH . X 4 HOH B 28 528 87 HOH HOH . X 4 HOH B 29 529 89 HOH HOH . X 4 HOH B 30 530 91 HOH HOH . X 4 HOH B 31 531 93 HOH HOH . X 4 HOH B 32 532 99 HOH HOH . X 4 HOH B 33 533 100 HOH HOH . X 4 HOH B 34 534 102 HOH HOH . X 4 HOH B 35 535 104 HOH HOH . X 4 HOH B 36 536 106 HOH HOH . X 4 HOH B 37 537 109 HOH HOH . X 4 HOH B 38 538 151 HOH HOH . X 4 HOH B 39 539 153 HOH HOH . X 4 HOH B 40 540 154 HOH HOH . X 4 HOH B 41 541 155 HOH HOH . X 4 HOH B 42 542 156 HOH HOH . X 4 HOH B 43 543 157 HOH HOH . X 4 HOH B 44 544 158 HOH HOH . X 4 HOH B 45 545 159 HOH HOH . X 4 HOH B 46 546 160 HOH HOH . X 4 HOH B 47 547 161 HOH HOH . X 4 HOH B 48 548 162 HOH HOH . X 4 HOH B 49 549 163 HOH HOH . X 4 HOH B 50 550 164 HOH HOH . X 4 HOH B 51 551 165 HOH HOH . X 4 HOH B 52 552 166 HOH HOH . X 4 HOH B 53 553 167 HOH HOH . X 4 HOH B 54 554 168 HOH HOH . X 4 HOH B 55 555 169 HOH HOH . X 4 HOH B 56 556 170 HOH HOH . X 4 HOH B 57 557 171 HOH HOH . X 4 HOH B 58 558 172 HOH HOH . X 4 HOH B 59 559 173 HOH HOH . X 4 HOH B 60 560 174 HOH HOH . X 4 HOH B 61 561 175 HOH HOH . X 4 HOH B 62 562 176 HOH HOH . X 4 HOH B 63 563 177 HOH HOH . X 4 HOH B 64 564 178 HOH HOH . X 4 HOH B 65 565 179 HOH HOH . X 4 HOH B 66 566 180 HOH HOH . X 4 HOH B 67 567 181 HOH HOH . X 4 HOH B 68 568 182 HOH HOH . X 4 HOH B 69 569 185 HOH HOH . X 4 HOH B 70 570 204 HOH HOH . X 4 HOH B 71 571 240 HOH HOH . X 4 HOH B 72 572 241 HOH HOH . X 4 HOH B 73 573 242 HOH HOH . X 4 HOH B 74 574 243 HOH HOH . X 4 HOH B 75 575 244 HOH HOH . X 4 HOH B 76 576 245 HOH HOH . X 4 HOH B 77 577 246 HOH HOH . X 4 HOH B 78 578 247 HOH HOH . X 4 HOH B 79 579 248 HOH HOH . X 4 HOH B 80 580 249 HOH HOH . X 4 HOH B 81 581 250 HOH HOH . X 4 HOH B 82 582 254 HOH HOH . X 4 HOH B 83 583 255 HOH HOH . X 4 HOH B 84 584 256 HOH HOH . X 4 HOH B 85 585 257 HOH HOH . X 4 HOH B 86 586 258 HOH HOH . X 4 HOH B 87 587 259 HOH HOH . X 4 HOH B 88 588 260 HOH HOH . X 4 HOH B 89 589 261 HOH HOH . X 4 HOH B 90 590 262 HOH HOH . X 4 HOH B 91 591 263 HOH HOH . X 4 HOH B 92 592 282 HOH HOH . X 4 HOH B 93 593 283 HOH HOH . X 4 HOH B 94 594 284 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . C 2 80.413 18.079 9.216 1 34.12 ? C1 MPD 401 A 1 HETATM 2 C C2 MPD . . . C 2 79.341 17.085 9.71 1 30.86 ? C2 MPD 401 A 1 HETATM 3 O O2 MPD . . . C 2 79.769 16.494 10.956 1 30.37 ? O2 MPD 401 A 1 HETATM 4 C CM MPD . . . C 2 78.049 17.859 9.908 1 30.02 ? CM MPD 401 A 1 HETATM 5 C C3 MPD . . . C 2 79.073 16.001 8.655 1 27.37 ? C3 MPD 401 A 1 HETATM 6 C C4 MPD . . . C 2 79.195 14.521 9.005 1 25.48 ? C4 MPD 401 A 1 HETATM 7 O O4 MPD . . . C 2 79.066 14.184 10.399 1 21.49 ? O4 MPD 401 A 1 HETATM 8 C C5 MPD . . . C 2 78.263 13.632 8.188 1 24.24 ? C5 MPD 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #