data_4EYL # _model_server_result.job_id q9ZQDP0DlQZILdCB-gQR_Q _model_server_result.datetime_utc '2024-11-28 16:14:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4eyl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":303}' # _entry.id 4EYL # _exptl.entry_id 4EYL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EYL _cell.length_a 106 _cell.length_b 106 _cell.length_c 92.58 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EYL _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 120 A HIS 120 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc2 A ND1 HIS 122 A HIS 122 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc3 A OD2 ASP 124 A ASP 124 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc4 A NE2 HIS 189 A HIS 189 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc5 A SG CYS 208 A CYS 208 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc6 A NE2 HIS 250 A HIS 250 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc7 C NAN 0RV . A 0RV 301 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc8 C OAI 0RV . A 0RV 301 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc9 C OAI 0RV . A 0RV 301 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc10 B NE2 HIS 120 B HIS 120 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc11 B ND1 HIS 122 B HIS 122 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc12 B OD2 ASP 124 B ASP 124 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc13 B NE2 HIS 189 B HIS 189 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc14 B SG CYS 208 B CYS 208 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc15 B NE2 HIS 250 B HIS 250 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc16 F NAN 0RV . B 0RV 301 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc17 F OAF 0RV . B 0RV 301 1_555 G ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc18 F OAF 0RV . B 0RV 301 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4EYL _atom_sites.fract_transf_matrix[1][1] 0.009434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009434 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010801 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0RV A 1 301 1 0RV 0RV . D 3 ZN A 1 302 1 ZN ZN . E 3 ZN A 1 303 2 ZN ZN . F 2 0RV B 1 301 1 0RV 0RV . G 3 ZN B 1 302 3 ZN ZN . H 3 ZN B 1 303 4 ZN ZN . I 4 HOH A 1 401 168 HOH HOH . I 4 HOH A 2 402 2 HOH HOH . I 4 HOH A 3 403 4 HOH HOH . I 4 HOH A 4 404 7 HOH HOH . I 4 HOH A 5 405 9 HOH HOH . I 4 HOH A 6 406 10 HOH HOH . I 4 HOH A 7 407 11 HOH HOH . I 4 HOH A 8 408 12 HOH HOH . I 4 HOH A 9 409 13 HOH HOH . I 4 HOH A 10 410 14 HOH HOH . I 4 HOH A 11 411 19 HOH HOH . I 4 HOH A 12 412 21 HOH HOH . I 4 HOH A 13 413 25 HOH HOH . I 4 HOH A 14 414 26 HOH HOH . I 4 HOH A 15 415 30 HOH HOH . I 4 HOH A 16 416 33 HOH HOH . I 4 HOH A 17 417 34 HOH HOH . I 4 HOH A 18 418 36 HOH HOH . I 4 HOH A 19 419 37 HOH HOH . I 4 HOH A 20 420 38 HOH HOH . I 4 HOH A 21 421 39 HOH HOH . I 4 HOH A 22 422 41 HOH HOH . I 4 HOH A 23 423 42 HOH HOH . I 4 HOH A 24 424 43 HOH HOH . I 4 HOH A 25 425 44 HOH HOH . I 4 HOH A 26 426 45 HOH HOH . I 4 HOH A 27 427 46 HOH HOH . I 4 HOH A 28 428 47 HOH HOH . I 4 HOH A 29 429 49 HOH HOH . I 4 HOH A 30 430 50 HOH HOH . I 4 HOH A 31 431 51 HOH HOH . I 4 HOH A 32 432 52 HOH HOH . I 4 HOH A 33 433 55 HOH HOH . I 4 HOH A 34 434 58 HOH HOH . I 4 HOH A 35 435 65 HOH HOH . I 4 HOH A 36 436 66 HOH HOH . I 4 HOH A 37 437 67 HOH HOH . I 4 HOH A 38 438 68 HOH HOH . I 4 HOH A 39 439 70 HOH HOH . I 4 HOH A 40 440 71 HOH HOH . I 4 HOH A 41 441 72 HOH HOH . I 4 HOH A 42 442 73 HOH HOH . I 4 HOH A 43 443 76 HOH HOH . I 4 HOH A 44 444 77 HOH HOH . I 4 HOH A 45 445 80 HOH HOH . I 4 HOH A 46 446 82 HOH HOH . I 4 HOH A 47 447 84 HOH HOH . I 4 HOH A 48 448 85 HOH HOH . I 4 HOH A 49 449 86 HOH HOH . I 4 HOH A 50 450 88 HOH HOH . I 4 HOH A 51 451 89 HOH HOH . I 4 HOH A 52 452 90 HOH HOH . I 4 HOH A 53 453 95 HOH HOH . I 4 HOH A 54 454 98 HOH HOH . I 4 HOH A 55 455 103 HOH HOH . I 4 HOH A 56 456 106 HOH HOH . I 4 HOH A 57 457 107 HOH HOH . I 4 HOH A 58 458 108 HOH HOH . I 4 HOH A 59 459 110 HOH HOH . I 4 HOH A 60 460 112 HOH HOH . I 4 HOH A 61 461 113 HOH HOH . I 4 HOH A 62 462 114 HOH HOH . I 4 HOH A 63 463 115 HOH HOH . I 4 HOH A 64 464 116 HOH HOH . I 4 HOH A 65 465 122 HOH HOH . I 4 HOH A 66 466 123 HOH HOH . I 4 HOH A 67 467 124 HOH HOH . I 4 HOH A 68 468 125 HOH HOH . I 4 HOH A 69 469 126 HOH HOH . I 4 HOH A 70 470 129 HOH HOH . I 4 HOH A 71 471 131 HOH HOH . I 4 HOH A 72 472 132 HOH HOH . I 4 HOH A 73 473 140 HOH HOH . I 4 HOH A 74 474 144 HOH HOH . I 4 HOH A 75 475 147 HOH HOH . I 4 HOH A 76 476 148 HOH HOH . I 4 HOH A 77 477 156 HOH HOH . I 4 HOH A 78 478 159 HOH HOH . I 4 HOH A 79 479 160 HOH HOH . I 4 HOH A 80 480 162 HOH HOH . I 4 HOH A 81 481 167 HOH HOH . I 4 HOH A 82 482 172 HOH HOH . I 4 HOH A 83 483 174 HOH HOH . I 4 HOH A 84 484 177 HOH HOH . I 4 HOH A 85 485 179 HOH HOH . J 4 HOH B 1 401 171 HOH HOH . J 4 HOH B 2 402 3 HOH HOH . J 4 HOH B 3 403 5 HOH HOH . J 4 HOH B 4 404 6 HOH HOH . J 4 HOH B 5 405 8 HOH HOH . J 4 HOH B 6 406 15 HOH HOH . J 4 HOH B 7 407 17 HOH HOH . J 4 HOH B 8 408 18 HOH HOH . J 4 HOH B 9 409 20 HOH HOH . J 4 HOH B 10 410 22 HOH HOH . J 4 HOH B 11 411 23 HOH HOH . J 4 HOH B 12 412 24 HOH HOH . J 4 HOH B 13 413 27 HOH HOH . J 4 HOH B 14 414 28 HOH HOH . J 4 HOH B 15 415 29 HOH HOH . J 4 HOH B 16 416 31 HOH HOH . J 4 HOH B 17 417 32 HOH HOH . J 4 HOH B 18 418 35 HOH HOH . J 4 HOH B 19 419 40 HOH HOH . J 4 HOH B 20 420 48 HOH HOH . J 4 HOH B 21 421 53 HOH HOH . J 4 HOH B 22 422 54 HOH HOH . J 4 HOH B 23 423 56 HOH HOH . J 4 HOH B 24 424 57 HOH HOH . J 4 HOH B 25 425 59 HOH HOH . J 4 HOH B 26 426 60 HOH HOH . J 4 HOH B 27 427 61 HOH HOH . J 4 HOH B 28 428 62 HOH HOH . J 4 HOH B 29 429 63 HOH HOH . J 4 HOH B 30 430 69 HOH HOH . J 4 HOH B 31 431 74 HOH HOH . J 4 HOH B 32 432 75 HOH HOH . J 4 HOH B 33 433 78 HOH HOH . J 4 HOH B 34 434 79 HOH HOH . J 4 HOH B 35 435 81 HOH HOH . J 4 HOH B 36 436 83 HOH HOH . J 4 HOH B 37 437 87 HOH HOH . J 4 HOH B 38 438 91 HOH HOH . J 4 HOH B 39 439 92 HOH HOH . J 4 HOH B 40 440 93 HOH HOH . J 4 HOH B 41 441 94 HOH HOH . J 4 HOH B 42 442 96 HOH HOH . J 4 HOH B 43 443 99 HOH HOH . J 4 HOH B 44 444 100 HOH HOH . J 4 HOH B 45 445 101 HOH HOH . J 4 HOH B 46 446 102 HOH HOH . J 4 HOH B 47 447 104 HOH HOH . J 4 HOH B 48 448 109 HOH HOH . J 4 HOH B 49 449 117 HOH HOH . J 4 HOH B 50 450 118 HOH HOH . J 4 HOH B 51 451 119 HOH HOH . J 4 HOH B 52 452 120 HOH HOH . J 4 HOH B 53 453 121 HOH HOH . J 4 HOH B 54 454 133 HOH HOH . J 4 HOH B 55 455 135 HOH HOH . J 4 HOH B 56 456 136 HOH HOH . J 4 HOH B 57 457 137 HOH HOH . J 4 HOH B 58 458 138 HOH HOH . J 4 HOH B 59 459 139 HOH HOH . J 4 HOH B 60 460 146 HOH HOH . J 4 HOH B 61 461 149 HOH HOH . J 4 HOH B 62 462 150 HOH HOH . J 4 HOH B 63 463 151 HOH HOH . J 4 HOH B 64 464 153 HOH HOH . J 4 HOH B 65 465 154 HOH HOH . J 4 HOH B 66 466 158 HOH HOH . J 4 HOH B 67 467 161 HOH HOH . J 4 HOH B 68 468 163 HOH HOH . J 4 HOH B 69 469 164 HOH HOH . J 4 HOH B 70 470 165 HOH HOH . J 4 HOH B 71 471 166 HOH HOH . J 4 HOH B 72 472 169 HOH HOH . J 4 HOH B 73 473 173 HOH HOH . J 4 HOH B 74 474 175 HOH HOH . J 4 HOH B 75 475 176 HOH HOH . J 4 HOH B 76 476 178 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.285 _atom_site.Cartn_y -50.968 _atom_site.Cartn_z 27.067 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 17.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 303 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #