data_4EZC # _model_server_result.job_id vZpHZJl0uB6sCFmYsLkqJw _model_server_result.datetime_utc '2024-11-04 22:37:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ezc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":403}' # _entry.id 4EZC # _exptl.entry_id 4EZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99 _cell.angle_gamma 90 _cell.entry_id 4EZC _cell.length_a 74.703 _cell.length_b 105.645 _cell.length_c 105.87 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 Q N N ? 2 R N N ? 2 S N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4EZC _atom_sites.fract_transf_matrix[1][1] 0.013386 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002119 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 BGC A 1 401 4 BGC BGC . E 2 BGC A 1 402 8 BGC BGC . F 3 BOG A 1 403 1 BOG BOG . G 3 BOG A 1 404 2 BOG BOG . H 3 BOG A 1 405 4 BOG BOG . I 3 BOG A 1 406 10 BOG BOG . J 4 SPL A 1 407 3 SPL SPL . K 2 BGC B 1 401 1 BGC BGC . L 2 BGC B 1 402 5 BGC BGC . M 2 BGC B 1 403 7 BGC BGC . N 3 BOG B 1 404 6 BOG BOG . O 3 BOG B 1 405 9 BOG BOG . P 4 SPL B 1 406 1 SPL SPL . Q 2 BGC C 1 401 2 BGC BGC . R 2 BGC C 1 402 3 BGC BGC . S 2 BGC C 1 403 6 BGC BGC . T 3 BOG C 1 404 3 BOG BOG . U 3 BOG C 1 405 5 BOG BOG . V 3 BOG C 1 406 7 BOG BOG . W 3 BOG C 1 407 8 BOG BOG . X 4 SPL C 1 408 2 SPL SPL . Y 5 HOH A 1 501 1 HOH HOH . Y 5 HOH A 2 502 4 HOH HOH . Y 5 HOH A 3 503 13 HOH HOH . Y 5 HOH A 4 504 14 HOH HOH . Y 5 HOH A 5 505 15 HOH HOH . Y 5 HOH A 6 506 16 HOH HOH . Y 5 HOH A 7 507 17 HOH HOH . Y 5 HOH A 8 508 18 HOH HOH . Y 5 HOH A 9 509 37 HOH HOH . Y 5 HOH A 10 510 38 HOH HOH . Y 5 HOH A 11 511 39 HOH HOH . Y 5 HOH A 12 512 40 HOH HOH . Y 5 HOH A 13 513 41 HOH HOH . Y 5 HOH A 14 514 46 HOH HOH . Y 5 HOH A 15 515 47 HOH HOH . Y 5 HOH A 16 516 48 HOH HOH . Y 5 HOH A 17 517 49 HOH HOH . Y 5 HOH A 18 518 50 HOH HOH . Y 5 HOH A 19 519 51 HOH HOH . Y 5 HOH A 20 520 54 HOH HOH . Y 5 HOH A 21 521 64 HOH HOH . Y 5 HOH A 22 522 65 HOH HOH . Y 5 HOH A 23 523 66 HOH HOH . Y 5 HOH A 24 524 67 HOH HOH . Y 5 HOH A 25 525 68 HOH HOH . Y 5 HOH A 26 526 69 HOH HOH . Y 5 HOH A 27 527 70 HOH HOH . Y 5 HOH A 28 528 71 HOH HOH . Y 5 HOH A 29 529 72 HOH HOH . Y 5 HOH A 30 530 74 HOH HOH . Y 5 HOH A 31 531 75 HOH HOH . Y 5 HOH A 32 532 76 HOH HOH . Y 5 HOH A 33 533 138 HOH HOH . Y 5 HOH A 34 534 139 HOH HOH . Y 5 HOH A 35 535 140 HOH HOH . Y 5 HOH A 36 536 141 HOH HOH . Y 5 HOH A 37 537 142 HOH HOH . Y 5 HOH A 38 538 143 HOH HOH . Y 5 HOH A 39 539 144 HOH HOH . Y 5 HOH A 40 540 145 HOH HOH . Y 5 HOH A 41 541 151 HOH HOH . Y 5 HOH A 42 542 155 HOH HOH . Y 5 HOH A 43 543 160 HOH HOH . Y 5 HOH A 44 544 164 HOH HOH . Y 5 HOH A 45 545 165 HOH HOH . Y 5 HOH A 46 546 166 HOH HOH . Y 5 HOH A 47 547 167 HOH HOH . Y 5 HOH A 48 548 169 HOH HOH . Y 5 HOH A 49 549 170 HOH HOH . Y 5 HOH A 50 550 172 HOH HOH . Y 5 HOH A 51 551 176 HOH HOH . Y 5 HOH A 52 552 177 HOH HOH . Y 5 HOH A 53 553 178 HOH HOH . Y 5 HOH A 54 554 181 HOH HOH . Y 5 HOH A 55 555 182 HOH HOH . Y 5 HOH A 56 556 183 HOH HOH . Y 5 HOH A 57 557 186 HOH HOH . Y 5 HOH A 58 558 192 HOH HOH . Y 5 HOH A 59 559 193 HOH HOH . Z 5 HOH B 1 501 2 HOH HOH . Z 5 HOH B 2 502 3 HOH HOH . Z 5 HOH B 3 503 10 HOH HOH . Z 5 HOH B 4 504 11 HOH HOH . Z 5 HOH B 5 505 12 HOH HOH . Z 5 HOH B 6 506 28 HOH HOH . Z 5 HOH B 7 507 29 HOH HOH . Z 5 HOH B 8 508 30 HOH HOH . Z 5 HOH B 9 509 31 HOH HOH . Z 5 HOH B 10 510 32 HOH HOH . Z 5 HOH B 11 511 34 HOH HOH . Z 5 HOH B 12 512 35 HOH HOH . Z 5 HOH B 13 513 36 HOH HOH . Z 5 HOH B 14 514 42 HOH HOH . Z 5 HOH B 15 515 43 HOH HOH . Z 5 HOH B 16 516 44 HOH HOH . Z 5 HOH B 17 517 45 HOH HOH . Z 5 HOH B 18 518 52 HOH HOH . Z 5 HOH B 19 519 53 HOH HOH . Z 5 HOH B 20 520 63 HOH HOH . Z 5 HOH B 21 521 73 HOH HOH . Z 5 HOH B 22 522 78 HOH HOH . Z 5 HOH B 23 523 79 HOH HOH . Z 5 HOH B 24 524 80 HOH HOH . Z 5 HOH B 25 525 81 HOH HOH . Z 5 HOH B 26 526 82 HOH HOH . Z 5 HOH B 27 527 83 HOH HOH . Z 5 HOH B 28 528 85 HOH HOH . Z 5 HOH B 29 529 86 HOH HOH . Z 5 HOH B 30 530 87 HOH HOH . Z 5 HOH B 31 531 88 HOH HOH . Z 5 HOH B 32 532 89 HOH HOH . Z 5 HOH B 33 533 92 HOH HOH . Z 5 HOH B 34 534 93 HOH HOH . Z 5 HOH B 35 535 94 HOH HOH . Z 5 HOH B 36 536 95 HOH HOH . Z 5 HOH B 37 537 96 HOH HOH . Z 5 HOH B 38 538 97 HOH HOH . Z 5 HOH B 39 539 98 HOH HOH . Z 5 HOH B 40 540 99 HOH HOH . Z 5 HOH B 41 541 100 HOH HOH . Z 5 HOH B 42 542 101 HOH HOH . Z 5 HOH B 43 543 102 HOH HOH . Z 5 HOH B 44 544 103 HOH HOH . Z 5 HOH B 45 545 104 HOH HOH . Z 5 HOH B 46 546 105 HOH HOH . Z 5 HOH B 47 547 106 HOH HOH . Z 5 HOH B 48 548 123 HOH HOH . Z 5 HOH B 49 549 124 HOH HOH . Z 5 HOH B 50 550 125 HOH HOH . Z 5 HOH B 51 551 126 HOH HOH . Z 5 HOH B 52 552 129 HOH HOH . Z 5 HOH B 53 553 130 HOH HOH . Z 5 HOH B 54 554 131 HOH HOH . Z 5 HOH B 55 555 132 HOH HOH . Z 5 HOH B 56 556 133 HOH HOH . Z 5 HOH B 57 557 136 HOH HOH . Z 5 HOH B 58 558 150 HOH HOH . Z 5 HOH B 59 559 152 HOH HOH . Z 5 HOH B 60 560 153 HOH HOH . Z 5 HOH B 61 561 154 HOH HOH . Z 5 HOH B 62 562 171 HOH HOH . Z 5 HOH B 63 563 174 HOH HOH . Z 5 HOH B 64 564 175 HOH HOH . Z 5 HOH B 65 565 180 HOH HOH . Z 5 HOH B 66 566 197 HOH HOH . Z 5 HOH B 67 567 200 HOH HOH . Z 5 HOH B 68 568 201 HOH HOH . AA 5 HOH C 1 501 5 HOH HOH . AA 5 HOH C 2 502 6 HOH HOH . AA 5 HOH C 3 503 7 HOH HOH . AA 5 HOH C 4 504 8 HOH HOH . AA 5 HOH C 5 505 9 HOH HOH . AA 5 HOH C 6 506 20 HOH HOH . AA 5 HOH C 7 507 22 HOH HOH . AA 5 HOH C 8 508 23 HOH HOH . AA 5 HOH C 9 509 24 HOH HOH . AA 5 HOH C 10 510 25 HOH HOH . AA 5 HOH C 11 511 26 HOH HOH . AA 5 HOH C 12 512 27 HOH HOH . AA 5 HOH C 13 513 55 HOH HOH . AA 5 HOH C 14 514 56 HOH HOH . AA 5 HOH C 15 515 57 HOH HOH . AA 5 HOH C 16 516 59 HOH HOH . AA 5 HOH C 17 517 60 HOH HOH . AA 5 HOH C 18 518 61 HOH HOH . AA 5 HOH C 19 519 62 HOH HOH . AA 5 HOH C 20 520 77 HOH HOH . AA 5 HOH C 21 521 84 HOH HOH . AA 5 HOH C 22 522 90 HOH HOH . AA 5 HOH C 23 523 91 HOH HOH . AA 5 HOH C 24 524 107 HOH HOH . AA 5 HOH C 25 525 108 HOH HOH . AA 5 HOH C 26 526 109 HOH HOH . AA 5 HOH C 27 527 110 HOH HOH . AA 5 HOH C 28 528 111 HOH HOH . AA 5 HOH C 29 529 112 HOH HOH . AA 5 HOH C 30 530 113 HOH HOH . AA 5 HOH C 31 531 114 HOH HOH . AA 5 HOH C 32 532 115 HOH HOH . AA 5 HOH C 33 533 116 HOH HOH . AA 5 HOH C 34 534 117 HOH HOH . AA 5 HOH C 35 535 118 HOH HOH . AA 5 HOH C 36 536 119 HOH HOH . AA 5 HOH C 37 537 120 HOH HOH . AA 5 HOH C 38 538 121 HOH HOH . AA 5 HOH C 39 539 122 HOH HOH . AA 5 HOH C 40 540 127 HOH HOH . AA 5 HOH C 41 541 128 HOH HOH . AA 5 HOH C 42 542 137 HOH HOH . AA 5 HOH C 43 543 146 HOH HOH . AA 5 HOH C 44 544 147 HOH HOH . AA 5 HOH C 45 545 148 HOH HOH . AA 5 HOH C 46 546 158 HOH HOH . AA 5 HOH C 47 547 159 HOH HOH . AA 5 HOH C 48 548 161 HOH HOH . AA 5 HOH C 49 549 162 HOH HOH . AA 5 HOH C 50 550 163 HOH HOH . AA 5 HOH C 51 551 168 HOH HOH . AA 5 HOH C 52 552 173 HOH HOH . AA 5 HOH C 53 553 179 HOH HOH . AA 5 HOH C 54 554 184 HOH HOH . AA 5 HOH C 55 555 185 HOH HOH . AA 5 HOH C 56 556 187 HOH HOH . AA 5 HOH C 57 557 188 HOH HOH . AA 5 HOH C 58 558 189 HOH HOH . AA 5 HOH C 59 559 190 HOH HOH . AA 5 HOH C 60 560 191 HOH HOH . AA 5 HOH C 61 561 194 HOH HOH . AA 5 HOH C 62 562 195 HOH HOH . AA 5 HOH C 63 563 196 HOH HOH . AA 5 HOH C 64 564 198 HOH HOH . AA 5 HOH C 65 565 199 HOH HOH . AA 5 HOH C 66 566 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . S 2 43.633 22.332 58.363 1 93.17 ? C2 BGC 403 C 1 HETATM 2 C C3 BGC . . . S 2 44.614 21.459 59.129 1 94.81 ? C3 BGC 403 C 1 HETATM 3 C C4 BGC . . . S 2 45.927 21.297 58.352 1 98.18 ? C4 BGC 403 C 1 HETATM 4 C C5 BGC . . . S 2 46.479 22.657 57.881 1 96.21 ? C5 BGC 403 C 1 HETATM 5 C C6 BGC . . . S 2 47.733 22.482 57.016 1 93.6 ? C6 BGC 403 C 1 HETATM 6 C C1 BGC . . . S 2 44.322 23.65 58.037 1 92.42 ? C1 BGC 403 C 1 HETATM 7 O O1 BGC . . . S 2 43.387 24.526 57.401 1 99.57 ? O1 BGC 403 C 1 HETATM 8 O O2 BGC . . . S 2 42.435 22.546 59.12 1 87.27 ? O2 BGC 403 C 1 HETATM 9 O O3 BGC . . . S 2 44.018 20.177 59.333 1 109.66 ? O3 BGC 403 C 1 HETATM 10 O O4 BGC . . . S 2 46.902 20.61 59.164 1 104.04 ? O4 BGC 403 C 1 HETATM 11 O O5 BGC . . . S 2 45.448 23.379 57.186 1 89.76 ? O5 BGC 403 C 1 HETATM 12 O O6 BGC . . . S 2 47.802 23.463 55.976 1 91.55 ? O6 BGC 403 C 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #