data_4EZF # _model_server_result.job_id DxW0CDH-ipwiq0-f4yb0fw _model_server_result.datetime_utc '2025-04-03 08:53:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ezf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 4EZF # _exptl.entry_id 4EZF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4EZF _cell.length_a 39.626 _cell.length_b 55.356 _cell.length_c 58.924 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4EZF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 41 A CYS 72 1_555 C FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc2 A SG CYS 43 A CYS 74 1_555 C FE1 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc3 A SG CYS 52 A CYS 83 1_555 C FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc4 A ND1 HIS 56 A HIS 87 1_555 C FE2 FES . A FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc5 B SG CYS 41 B CYS 72 1_555 D FE1 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc6 B SG CYS 43 B CYS 74 1_555 D FE1 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc7 B SG CYS 52 B CYS 83 1_555 D FE2 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc8 B ND1 HIS 56 B HIS 87 1_555 D FE2 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 83 n n FE1 S2 FES sing 84 n n FE2 S1 FES sing 85 n n FE2 S2 FES sing 86 n n # _atom_sites.entry_id 4EZF _atom_sites.fract_transf_matrix[1][1] 0.025236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016971 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FES A 1 201 109 FES FES . D 2 FES B 1 201 109 FES FES . E 3 HOH A 1 301 111 HOH HOH . E 3 HOH A 2 302 112 HOH HOH . E 3 HOH A 3 303 113 HOH HOH . E 3 HOH A 4 304 114 HOH HOH . E 3 HOH A 5 305 115 HOH HOH . E 3 HOH A 6 306 116 HOH HOH . E 3 HOH A 7 307 117 HOH HOH . E 3 HOH A 8 308 118 HOH HOH . E 3 HOH A 9 309 119 HOH HOH . E 3 HOH A 10 310 120 HOH HOH . E 3 HOH A 11 311 121 HOH HOH . E 3 HOH A 12 312 122 HOH HOH . E 3 HOH A 13 313 123 HOH HOH . E 3 HOH A 14 314 124 HOH HOH . E 3 HOH A 15 315 125 HOH HOH . E 3 HOH A 16 316 126 HOH HOH . E 3 HOH A 17 317 127 HOH HOH . E 3 HOH A 18 318 128 HOH HOH . E 3 HOH A 19 319 129 HOH HOH . E 3 HOH A 20 320 130 HOH HOH . E 3 HOH A 21 321 131 HOH HOH . E 3 HOH A 22 322 132 HOH HOH . E 3 HOH A 23 323 133 HOH HOH . E 3 HOH A 24 324 134 HOH HOH . E 3 HOH A 25 325 135 HOH HOH . E 3 HOH A 26 326 136 HOH HOH . E 3 HOH A 27 327 137 HOH HOH . E 3 HOH A 28 328 138 HOH HOH . E 3 HOH A 29 329 139 HOH HOH . E 3 HOH A 30 330 140 HOH HOH . E 3 HOH A 31 331 141 HOH HOH . E 3 HOH A 32 332 142 HOH HOH . E 3 HOH A 33 333 143 HOH HOH . E 3 HOH A 34 334 144 HOH HOH . E 3 HOH A 35 335 145 HOH HOH . E 3 HOH A 36 336 146 HOH HOH . E 3 HOH A 37 337 147 HOH HOH . E 3 HOH A 38 338 148 HOH HOH . E 3 HOH A 39 339 149 HOH HOH . E 3 HOH A 40 340 150 HOH HOH . E 3 HOH A 41 341 175 HOH HOH . E 3 HOH A 42 342 194 HOH HOH . E 3 HOH A 43 343 195 HOH HOH . E 3 HOH A 44 344 196 HOH HOH . E 3 HOH A 45 345 197 HOH HOH . E 3 HOH A 46 346 199 HOH HOH . E 3 HOH A 47 347 200 HOH HOH . E 3 HOH A 48 348 201 HOH HOH . E 3 HOH A 49 349 202 HOH HOH . E 3 HOH A 50 350 205 HOH HOH . E 3 HOH A 51 351 206 HOH HOH . E 3 HOH A 52 352 207 HOH HOH . E 3 HOH A 53 353 208 HOH HOH . E 3 HOH A 54 354 209 HOH HOH . E 3 HOH A 55 355 210 HOH HOH . E 3 HOH A 56 356 213 HOH HOH . E 3 HOH A 57 357 220 HOH HOH . E 3 HOH A 58 358 221 HOH HOH . E 3 HOH A 59 359 222 HOH HOH . E 3 HOH A 60 360 223 HOH HOH . E 3 HOH A 61 361 224 HOH HOH . E 3 HOH A 62 362 225 HOH HOH . E 3 HOH A 63 363 226 HOH HOH . E 3 HOH A 64 364 227 HOH HOH . E 3 HOH A 65 365 229 HOH HOH . E 3 HOH A 66 366 231 HOH HOH . E 3 HOH A 67 367 233 HOH HOH . E 3 HOH A 68 368 234 HOH HOH . E 3 HOH A 69 369 235 HOH HOH . E 3 HOH A 70 370 240 HOH HOH . E 3 HOH A 71 371 241 HOH HOH . E 3 HOH A 72 372 242 HOH HOH . F 3 HOH B 1 301 110 HOH HOH . F 3 HOH B 2 302 151 HOH HOH . F 3 HOH B 3 303 152 HOH HOH . F 3 HOH B 4 304 153 HOH HOH . F 3 HOH B 5 305 154 HOH HOH . F 3 HOH B 6 306 155 HOH HOH . F 3 HOH B 7 307 156 HOH HOH . F 3 HOH B 8 308 157 HOH HOH . F 3 HOH B 9 309 158 HOH HOH . F 3 HOH B 10 310 159 HOH HOH . F 3 HOH B 11 311 160 HOH HOH . F 3 HOH B 12 312 161 HOH HOH . F 3 HOH B 13 313 162 HOH HOH . F 3 HOH B 14 314 163 HOH HOH . F 3 HOH B 15 315 164 HOH HOH . F 3 HOH B 16 316 165 HOH HOH . F 3 HOH B 17 317 166 HOH HOH . F 3 HOH B 18 318 167 HOH HOH . F 3 HOH B 19 319 168 HOH HOH . F 3 HOH B 20 320 169 HOH HOH . F 3 HOH B 21 321 170 HOH HOH . F 3 HOH B 22 322 171 HOH HOH . F 3 HOH B 23 323 172 HOH HOH . F 3 HOH B 24 324 173 HOH HOH . F 3 HOH B 25 325 174 HOH HOH . F 3 HOH B 26 326 176 HOH HOH . F 3 HOH B 27 327 177 HOH HOH . F 3 HOH B 28 328 178 HOH HOH . F 3 HOH B 29 329 179 HOH HOH . F 3 HOH B 30 330 180 HOH HOH . F 3 HOH B 31 331 181 HOH HOH . F 3 HOH B 32 332 182 HOH HOH . F 3 HOH B 33 333 183 HOH HOH . F 3 HOH B 34 334 184 HOH HOH . F 3 HOH B 35 335 185 HOH HOH . F 3 HOH B 36 336 186 HOH HOH . F 3 HOH B 37 337 187 HOH HOH . F 3 HOH B 38 338 188 HOH HOH . F 3 HOH B 39 339 189 HOH HOH . F 3 HOH B 40 340 190 HOH HOH . F 3 HOH B 41 341 191 HOH HOH . F 3 HOH B 42 342 192 HOH HOH . F 3 HOH B 43 343 193 HOH HOH . F 3 HOH B 44 344 198 HOH HOH . F 3 HOH B 45 345 203 HOH HOH . F 3 HOH B 46 346 204 HOH HOH . F 3 HOH B 47 347 211 HOH HOH . F 3 HOH B 48 348 212 HOH HOH . F 3 HOH B 49 349 214 HOH HOH . F 3 HOH B 50 350 215 HOH HOH . F 3 HOH B 51 351 216 HOH HOH . F 3 HOH B 52 352 217 HOH HOH . F 3 HOH B 53 353 218 HOH HOH . F 3 HOH B 54 354 219 HOH HOH . F 3 HOH B 55 355 228 HOH HOH . F 3 HOH B 56 356 230 HOH HOH . F 3 HOH B 57 357 232 HOH HOH . F 3 HOH B 58 358 236 HOH HOH . F 3 HOH B 59 359 237 HOH HOH . F 3 HOH B 60 360 238 HOH HOH . F 3 HOH B 61 361 239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . D 2 -11.667 7.464 -8.071 1 11.75 ? FE1 FES 201 B 1 HETATM 2 FE FE2 FES . . . D 2 -13.422 7.421 -10.103 1 12.46 ? FE2 FES 201 B 1 HETATM 3 S S1 FES . . . D 2 -13.306 8.871 -8.42 1 13.45 ? S1 FES 201 B 1 HETATM 4 S S2 FES . . . D 2 -11.808 5.936 -9.668 1 11.44 ? S2 FES 201 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #