data_4EZL
#
_model_server_result.job_id            5G71o1oFU5DGwt3hrc9XGA 
_model_server_result.datetime_utc      '2024-12-21 18:17:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ezl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1201}' 
#
_entry.id    4EZL 
#
_exptl.entry_id    4EZL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              464.563 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-(1-{[2-(2-aminopyrimidin-5-yl)-4-(morpholin-4-yl)pyrido[3,2-d]pyrimidin-6-yl]methyl}piperidin-4-yl)propan-2-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.1 
_cell.angle_gamma         90 
_cell.entry_id            4EZL 
_cell.length_a            141.331 
_cell.length_b            67.194 
_cell.length_c            106.558 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4EZL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C24 H32 N8 O2' 
_chem_comp.formula_weight    464.563 
_chem_comp.id                0SE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-(1-{[2-(2-aminopyrimidin-5-yl)-4-(morpholin-4-yl)pyrido[3,2-d]pyrimidin-6-yl]methyl}piperidin-4-yl)propan-2-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3 C2 0SE sing 1 n n 
O34 C2 0SE sing 2 n n 
C2 C1 0SE sing 3 n n 
C2 C4 0SE sing 4 n n 
C4 C5 0SE sing 5 n n 
C4 C9 0SE sing 6 n n 
C5 C6 0SE sing 7 n n 
C6 N7 0SE sing 8 n n 
C9 C8 0SE sing 9 n n 
N23 C22 0SE doub 10 n y 
N23 C24 0SE sing 11 n y 
C22 C21 0SE sing 12 n y 
N27 C24 0SE sing 13 n n 
N7 C8 0SE sing 14 n n 
N7 C10 0SE sing 15 n n 
C13 C12 0SE doub 16 n y 
C13 C14 0SE sing 17 n y 
C24 N25 0SE doub 18 n y 
C12 C11 0SE sing 19 n y 
N20 C14 0SE doub 20 n y 
N20 C19 0SE sing 21 n y 
C14 C15 0SE sing 22 n y 
C21 C19 0SE sing 23 n n 
C21 C26 0SE doub 24 n y 
C19 N18 0SE doub 25 n y 
C11 C10 0SE sing 26 n n 
C11 N16 0SE doub 27 n y 
N25 C26 0SE sing 28 n y 
C15 N16 0SE sing 29 n y 
C15 C17 0SE doub 30 n y 
N18 C17 0SE sing 31 n y 
C33 N28 0SE sing 32 n n 
C33 C32 0SE sing 33 n n 
C17 N28 0SE sing 34 n n 
N28 C29 0SE sing 35 n n 
C32 O31 0SE sing 36 n n 
C29 C30 0SE sing 37 n n 
C30 O31 0SE sing 38 n n 
C1 H1 0SE sing 39 n n 
C1 H2 0SE sing 40 n n 
C1 H3 0SE sing 41 n n 
C3 H4 0SE sing 42 n n 
C3 H5 0SE sing 43 n n 
C3 H6 0SE sing 44 n n 
C4 H7 0SE sing 45 n n 
C5 H8 0SE sing 46 n n 
C5 H9 0SE sing 47 n n 
C6 H10 0SE sing 48 n n 
C6 H11 0SE sing 49 n n 
C8 H13 0SE sing 50 n n 
C8 H14 0SE sing 51 n n 
C9 H15 0SE sing 52 n n 
C9 H16 0SE sing 53 n n 
C10 H17 0SE sing 54 n n 
C10 H18 0SE sing 55 n n 
C12 H19 0SE sing 56 n n 
C13 H20 0SE sing 57 n n 
C22 H21 0SE sing 58 n n 
C26 H22 0SE sing 59 n n 
N27 H23 0SE sing 60 n n 
N27 H24 0SE sing 61 n n 
C29 H25 0SE sing 62 n n 
C29 H26 0SE sing 63 n n 
C30 H27 0SE sing 64 n n 
C30 H28 0SE sing 65 n n 
C32 H29 0SE sing 66 n n 
C32 H30 0SE sing 67 n n 
C33 H31 0SE sing 68 n n 
C33 H32 0SE sing 69 n n 
O34 H33 0SE sing 70 n n 
#
_atom_sites.entry_id                     4EZL 
_atom_sites.fract_transf_matrix[1][1]    0.007076 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000756 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014882 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009438 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 0SE A 1 1201 1 0SE ZZZ . 
C 3 HOH A 1 1301 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 0SE . . . B 2 15.54 2.706 17.127 1 120.35 ? C1 0SE 1201 A 1 
HETATM 2 C C2 0SE . . . B 2 14.925 1.321 16.908 1 121.62 ? C2 0SE 1201 A 1 
HETATM 3 C C3 0SE . . . B 2 15.612 0.658 15.709 1 119.95 ? C3 0SE 1201 A 1 
HETATM 4 C C4 0SE . . . B 2 15.121 0.445 18.151 1 116.21 ? C4 0SE 1201 A 1 
HETATM 5 C C5 0SE . . . B 2 16.578 -0.002 18.212 1 112.63 ? C5 0SE 1201 A 1 
HETATM 6 C C6 0SE . . . B 2 16.615 -0.974 19.378 1 110.21 ? C6 0SE 1201 A 1 
HETATM 7 N N7 0SE . . . B 2 16.54 -0.126 20.561 1 107.77 ? N7 0SE 1201 A 1 
HETATM 8 C C8 0SE . . . B 2 15.161 0.368 20.707 1 109.94 ? C8 0SE 1201 A 1 
HETATM 9 C C9 0SE . . . B 2 14.744 1.172 19.458 1 112.6 ? C9 0SE 1201 A 1 
HETATM 10 C C10 0SE . . . B 2 17.095 -0.799 21.746 1 103.38 ? C10 0SE 1201 A 1 
HETATM 11 C C11 0SE . . . B 2 18.468 -1.394 21.483 1 98.65 ? C11 0SE 1201 A 1 
HETATM 12 C C12 0SE . . . B 2 19.465 -0.668 20.823 1 96.75 ? C12 0SE 1201 A 1 
HETATM 13 C C13 0SE . . . B 2 20.693 -1.225 20.589 1 94.93 ? C13 0SE 1201 A 1 
HETATM 14 C C14 0SE . . . B 2 20.927 -2.53 21.055 1 93.36 ? C14 0SE 1201 A 1 
HETATM 15 C C15 0SE . . . B 2 19.884 -3.207 21.729 1 93 ? C15 0SE 1201 A 1 
HETATM 16 N N16 0SE . . . B 2 18.709 -2.611 21.91 1 96.05 ? N16 0SE 1201 A 1 
HETATM 17 C C17 0SE . . . B 2 20.15 -4.568 22.204 1 90.06 ? C17 0SE 1201 A 1 
HETATM 18 N N18 0SE . . . B 2 21.362 -5.068 21.982 1 90.23 ? N18 0SE 1201 A 1 
HETATM 19 C C19 0SE . . . B 2 22.295 -4.372 21.33 1 89.72 ? C19 0SE 1201 A 1 
HETATM 20 N N20 0SE . . . B 2 22.099 -3.148 20.884 1 91.9 ? N20 0SE 1201 A 1 
HETATM 21 C C21 0SE . . . B 2 23.636 -4.966 21.096 1 86.16 ? C21 0SE 1201 A 1 
HETATM 22 C C22 0SE . . . B 2 24.397 -4.558 19.994 1 84.22 ? C22 0SE 1201 A 1 
HETATM 23 N N23 0SE . . . B 2 25.59 -5.093 19.804 1 82.72 ? N23 0SE 1201 A 1 
HETATM 24 C C24 0SE . . . B 2 26.069 -6.004 20.642 1 81.74 ? C24 0SE 1201 A 1 
HETATM 25 N N25 0SE . . . B 2 25.38 -6.415 21.701 1 82.84 ? N25 0SE 1201 A 1 
HETATM 26 C C26 0SE . . . B 2 24.176 -5.928 21.959 1 84.29 ? C26 0SE 1201 A 1 
HETATM 27 N N27 0SE . . . B 2 27.323 -6.537 20.404 1 80.24 ? N27 0SE 1201 A 1 
HETATM 28 N N28 0SE . . . B 2 19.189 -5.288 22.894 1 86.69 ? N28 0SE 1201 A 1 
HETATM 29 C C29 0SE . . . B 2 19.761 -6.418 23.637 1 85.34 ? C29 0SE 1201 A 1 
HETATM 30 C C30 0SE . . . B 2 18.63 -7.281 24.204 1 84.25 ? C30 0SE 1201 A 1 
HETATM 31 O O31 0SE . . . B 2 17.434 -6.511 24.362 1 83.77 ? O31 0SE 1201 A 1 
HETATM 32 C C32 0SE . . . B 2 16.882 -5.975 23.152 1 84.26 ? C32 0SE 1201 A 1 
HETATM 33 C C33 0SE . . . B 2 17.99 -5.675 22.138 1 84.97 ? C33 0SE 1201 A 1 
HETATM 34 O O34 0SE . . . B 2 13.528 1.441 16.636 1 124.22 ? O34 0SE 1201 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           34 
#