data_4F29 # _model_server_result.job_id AQlfK5Iwd0xdxl6xevnveA _model_server_result.datetime_utc '2024-11-29 04:58:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f29 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4F29 # _exptl.entry_id 4F29 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.126 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F29 _cell.length_a 47.411 _cell.length_b 47.516 _cell.length_c 137.595 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F29 _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 68.7975 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 203 A CYS 206 1_555 A SG CYS 258 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc1 A NE2 HIS 20 A HIS 23 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? # _chem_comp.formula 'C5 H7 N3 O5' _chem_comp.formula_weight 189.126 _chem_comp.id QUS _chem_comp.mon_nstd_flag . _chem_comp.name '(S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms QUISQUALATE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 QUS sing 277 n n C01 O16 QUS doub 278 n n C01 O17 QUS sing 279 n n C02 C03 QUS sing 280 n n C02 NP3 QUS sing 281 n n C02 H02 QUS sing 282 n n C03 N14 QUS sing 283 n n C03 H031 QUS sing 284 n n C03 H032 QUS sing 285 n n C04 N14 QUS sing 286 n y C04 N15 QUS sing 287 n y C04 O18 QUS doub 288 n n C05 N15 QUS sing 289 n y C05 O19 QUS doub 290 n n C05 O20 QUS sing 291 n y NP3 HP31 QUS sing 292 n n NP3 HP32 QUS sing 293 n n N14 O20 QUS sing 294 n y N15 H15 QUS sing 295 n n O17 H17 QUS sing 296 n n # _atom_sites.entry_id 4F29 _atom_sites.fract_transf_matrix[1][1] 0.021092 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021046 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QUS A 1 301 500 QUS QUS . C 3 ZN A 1 302 1 ZN ZN . D 4 HOH A 1 401 2 HOH HOH . D 4 HOH A 2 402 3 HOH HOH . D 4 HOH A 3 403 4 HOH HOH . D 4 HOH A 4 404 5 HOH HOH . D 4 HOH A 5 405 6 HOH HOH . D 4 HOH A 6 406 7 HOH HOH . D 4 HOH A 7 407 8 HOH HOH . D 4 HOH A 8 408 9 HOH HOH . D 4 HOH A 9 409 10 HOH HOH . D 4 HOH A 10 410 11 HOH HOH . D 4 HOH A 11 411 12 HOH HOH . D 4 HOH A 12 412 13 HOH HOH . D 4 HOH A 13 413 14 HOH HOH . D 4 HOH A 14 414 15 HOH HOH . D 4 HOH A 15 415 16 HOH HOH . D 4 HOH A 16 416 17 HOH HOH . D 4 HOH A 17 417 18 HOH HOH . D 4 HOH A 18 418 19 HOH HOH . D 4 HOH A 19 419 20 HOH HOH . D 4 HOH A 20 420 21 HOH HOH . D 4 HOH A 21 421 22 HOH HOH . D 4 HOH A 22 422 23 HOH HOH . D 4 HOH A 23 423 24 HOH HOH . D 4 HOH A 24 424 25 HOH HOH . D 4 HOH A 25 425 26 HOH HOH . D 4 HOH A 26 426 27 HOH HOH . D 4 HOH A 27 427 28 HOH HOH . D 4 HOH A 28 428 29 HOH HOH . D 4 HOH A 29 429 30 HOH HOH . D 4 HOH A 30 430 31 HOH HOH . D 4 HOH A 31 431 32 HOH HOH . D 4 HOH A 32 432 33 HOH HOH . D 4 HOH A 33 433 34 HOH HOH . D 4 HOH A 34 434 35 HOH HOH . D 4 HOH A 35 435 36 HOH HOH . D 4 HOH A 36 436 37 HOH HOH . D 4 HOH A 37 437 38 HOH HOH . D 4 HOH A 38 438 39 HOH HOH . D 4 HOH A 39 439 40 HOH HOH . D 4 HOH A 40 440 41 HOH HOH . D 4 HOH A 41 441 43 HOH HOH . D 4 HOH A 42 442 44 HOH HOH . D 4 HOH A 43 443 45 HOH HOH . D 4 HOH A 44 444 46 HOH HOH . D 4 HOH A 45 445 47 HOH HOH . D 4 HOH A 46 446 48 HOH HOH . D 4 HOH A 47 447 49 HOH HOH . D 4 HOH A 48 448 50 HOH HOH . D 4 HOH A 49 449 51 HOH HOH . D 4 HOH A 50 450 52 HOH HOH . D 4 HOH A 51 451 53 HOH HOH . D 4 HOH A 52 452 54 HOH HOH . D 4 HOH A 53 453 55 HOH HOH . D 4 HOH A 54 454 56 HOH HOH . D 4 HOH A 55 455 57 HOH HOH . D 4 HOH A 56 456 58 HOH HOH . D 4 HOH A 57 457 59 HOH HOH . D 4 HOH A 58 458 60 HOH HOH . D 4 HOH A 59 459 61 HOH HOH . D 4 HOH A 60 460 62 HOH HOH . D 4 HOH A 61 461 63 HOH HOH . D 4 HOH A 62 462 64 HOH HOH . D 4 HOH A 63 463 65 HOH HOH . D 4 HOH A 64 464 66 HOH HOH . D 4 HOH A 65 465 67 HOH HOH . D 4 HOH A 66 466 68 HOH HOH . D 4 HOH A 67 467 69 HOH HOH . D 4 HOH A 68 468 70 HOH HOH . D 4 HOH A 69 469 71 HOH HOH . D 4 HOH A 70 470 72 HOH HOH . D 4 HOH A 71 471 73 HOH HOH . D 4 HOH A 72 472 74 HOH HOH . D 4 HOH A 73 473 75 HOH HOH . D 4 HOH A 74 474 76 HOH HOH . D 4 HOH A 75 475 77 HOH HOH . D 4 HOH A 76 476 78 HOH HOH . D 4 HOH A 77 477 79 HOH HOH . D 4 HOH A 78 478 80 HOH HOH . D 4 HOH A 79 479 81 HOH HOH . D 4 HOH A 80 480 82 HOH HOH . D 4 HOH A 81 481 83 HOH HOH . D 4 HOH A 82 482 84 HOH HOH . D 4 HOH A 83 483 85 HOH HOH . D 4 HOH A 84 484 86 HOH HOH . D 4 HOH A 85 485 87 HOH HOH . D 4 HOH A 86 486 88 HOH HOH . D 4 HOH A 87 487 89 HOH HOH . D 4 HOH A 88 488 90 HOH HOH . D 4 HOH A 89 489 91 HOH HOH . D 4 HOH A 90 490 92 HOH HOH . D 4 HOH A 91 491 93 HOH HOH . D 4 HOH A 92 492 94 HOH HOH . D 4 HOH A 93 493 95 HOH HOH . D 4 HOH A 94 494 96 HOH HOH . D 4 HOH A 95 495 97 HOH HOH . D 4 HOH A 96 496 98 HOH HOH . D 4 HOH A 97 497 99 HOH HOH . D 4 HOH A 98 498 100 HOH HOH . D 4 HOH A 99 499 101 HOH HOH . D 4 HOH A 100 500 102 HOH HOH . D 4 HOH A 101 501 103 HOH HOH . D 4 HOH A 102 502 104 HOH HOH . D 4 HOH A 103 503 105 HOH HOH . D 4 HOH A 104 504 106 HOH HOH . D 4 HOH A 105 505 107 HOH HOH . D 4 HOH A 106 506 108 HOH HOH . D 4 HOH A 107 507 109 HOH HOH . D 4 HOH A 108 508 110 HOH HOH . D 4 HOH A 109 509 111 HOH HOH . D 4 HOH A 110 510 112 HOH HOH . D 4 HOH A 111 511 113 HOH HOH . D 4 HOH A 112 512 114 HOH HOH . D 4 HOH A 113 513 115 HOH HOH . D 4 HOH A 114 514 116 HOH HOH . D 4 HOH A 115 515 117 HOH HOH . D 4 HOH A 116 516 118 HOH HOH . D 4 HOH A 117 517 119 HOH HOH . D 4 HOH A 118 518 120 HOH HOH . D 4 HOH A 119 519 121 HOH HOH . D 4 HOH A 120 520 122 HOH HOH . D 4 HOH A 121 521 123 HOH HOH . D 4 HOH A 122 522 124 HOH HOH . D 4 HOH A 123 523 125 HOH HOH . D 4 HOH A 124 524 126 HOH HOH . D 4 HOH A 125 525 127 HOH HOH . D 4 HOH A 126 526 128 HOH HOH . D 4 HOH A 127 527 129 HOH HOH . D 4 HOH A 128 528 130 HOH HOH . D 4 HOH A 129 529 131 HOH HOH . D 4 HOH A 130 530 132 HOH HOH . D 4 HOH A 131 531 133 HOH HOH . D 4 HOH A 132 532 134 HOH HOH . D 4 HOH A 133 533 135 HOH HOH . D 4 HOH A 134 534 136 HOH HOH . D 4 HOH A 135 535 137 HOH HOH . D 4 HOH A 136 536 138 HOH HOH . D 4 HOH A 137 537 139 HOH HOH . D 4 HOH A 138 538 140 HOH HOH . D 4 HOH A 139 539 141 HOH HOH . D 4 HOH A 140 540 142 HOH HOH . D 4 HOH A 141 541 143 HOH HOH . D 4 HOH A 142 542 144 HOH HOH . D 4 HOH A 143 543 145 HOH HOH . D 4 HOH A 144 544 146 HOH HOH . D 4 HOH A 145 545 147 HOH HOH . D 4 HOH A 146 546 148 HOH HOH . D 4 HOH A 147 547 149 HOH HOH . D 4 HOH A 148 548 150 HOH HOH . D 4 HOH A 149 549 151 HOH HOH . D 4 HOH A 150 550 152 HOH HOH . D 4 HOH A 151 551 153 HOH HOH . D 4 HOH A 152 552 154 HOH HOH . D 4 HOH A 153 553 155 HOH HOH . D 4 HOH A 154 554 156 HOH HOH . D 4 HOH A 155 555 157 HOH HOH . D 4 HOH A 156 556 158 HOH HOH . D 4 HOH A 157 557 159 HOH HOH . D 4 HOH A 158 558 160 HOH HOH . D 4 HOH A 159 559 161 HOH HOH . D 4 HOH A 160 560 162 HOH HOH . D 4 HOH A 161 561 163 HOH HOH . D 4 HOH A 162 562 164 HOH HOH . D 4 HOH A 163 563 165 HOH HOH . D 4 HOH A 164 564 166 HOH HOH . D 4 HOH A 165 565 167 HOH HOH . D 4 HOH A 166 566 168 HOH HOH . D 4 HOH A 167 567 169 HOH HOH . D 4 HOH A 168 568 170 HOH HOH . D 4 HOH A 169 569 171 HOH HOH . D 4 HOH A 170 570 172 HOH HOH . D 4 HOH A 171 571 173 HOH HOH . D 4 HOH A 172 572 174 HOH HOH . D 4 HOH A 173 573 175 HOH HOH . D 4 HOH A 174 574 176 HOH HOH . D 4 HOH A 175 575 177 HOH HOH . D 4 HOH A 176 576 178 HOH HOH . D 4 HOH A 177 577 179 HOH HOH . D 4 HOH A 178 578 180 HOH HOH . D 4 HOH A 179 579 181 HOH HOH . D 4 HOH A 180 580 182 HOH HOH . D 4 HOH A 181 581 183 HOH HOH . D 4 HOH A 182 582 184 HOH HOH . D 4 HOH A 183 583 186 HOH HOH . D 4 HOH A 184 584 187 HOH HOH . D 4 HOH A 185 585 188 HOH HOH . D 4 HOH A 186 586 189 HOH HOH . D 4 HOH A 187 587 190 HOH HOH . D 4 HOH A 188 588 191 HOH HOH . D 4 HOH A 189 589 192 HOH HOH . D 4 HOH A 190 590 193 HOH HOH . D 4 HOH A 191 591 194 HOH HOH . D 4 HOH A 192 592 195 HOH HOH . D 4 HOH A 193 593 196 HOH HOH . D 4 HOH A 194 594 197 HOH HOH . D 4 HOH A 195 595 198 HOH HOH . D 4 HOH A 196 596 199 HOH HOH . D 4 HOH A 197 597 200 HOH HOH . D 4 HOH A 198 598 201 HOH HOH . D 4 HOH A 199 599 202 HOH HOH . D 4 HOH A 200 600 203 HOH HOH . D 4 HOH A 201 601 204 HOH HOH . D 4 HOH A 202 602 205 HOH HOH . D 4 HOH A 203 603 206 HOH HOH . D 4 HOH A 204 604 207 HOH HOH . D 4 HOH A 205 605 208 HOH HOH . D 4 HOH A 206 606 209 HOH HOH . D 4 HOH A 207 607 210 HOH HOH . D 4 HOH A 208 608 211 HOH HOH . D 4 HOH A 209 609 212 HOH HOH . D 4 HOH A 210 610 213 HOH HOH . D 4 HOH A 211 611 214 HOH HOH . D 4 HOH A 212 612 215 HOH HOH . D 4 HOH A 213 613 216 HOH HOH . D 4 HOH A 214 614 217 HOH HOH . D 4 HOH A 215 615 218 HOH HOH . D 4 HOH A 216 616 219 HOH HOH . D 4 HOH A 217 617 220 HOH HOH . D 4 HOH A 218 618 221 HOH HOH . D 4 HOH A 219 619 222 HOH HOH . D 4 HOH A 220 620 223 HOH HOH . D 4 HOH A 221 621 224 HOH HOH . D 4 HOH A 222 622 225 HOH HOH . D 4 HOH A 223 623 226 HOH HOH . D 4 HOH A 224 624 227 HOH HOH . D 4 HOH A 225 625 228 HOH HOH . D 4 HOH A 226 626 229 HOH HOH . D 4 HOH A 227 627 230 HOH HOH . D 4 HOH A 228 628 231 HOH HOH . D 4 HOH A 229 629 232 HOH HOH . D 4 HOH A 230 630 233 HOH HOH . D 4 HOH A 231 631 234 HOH HOH . D 4 HOH A 232 632 235 HOH HOH . D 4 HOH A 233 633 236 HOH HOH . D 4 HOH A 234 634 237 HOH HOH . D 4 HOH A 235 635 238 HOH HOH . D 4 HOH A 236 636 239 HOH HOH . D 4 HOH A 237 637 240 HOH HOH . D 4 HOH A 238 638 241 HOH HOH . D 4 HOH A 239 639 242 HOH HOH . D 4 HOH A 240 640 243 HOH HOH . D 4 HOH A 241 641 244 HOH HOH . D 4 HOH A 242 642 245 HOH HOH . D 4 HOH A 243 643 246 HOH HOH . D 4 HOH A 244 644 247 HOH HOH . D 4 HOH A 245 645 248 HOH HOH . D 4 HOH A 246 646 249 HOH HOH . D 4 HOH A 247 647 250 HOH HOH . D 4 HOH A 248 648 251 HOH HOH . D 4 HOH A 249 649 252 HOH HOH . D 4 HOH A 250 650 253 HOH HOH . D 4 HOH A 251 651 254 HOH HOH . D 4 HOH A 252 652 255 HOH HOH . D 4 HOH A 253 653 256 HOH HOH . D 4 HOH A 254 654 257 HOH HOH . D 4 HOH A 255 655 258 HOH HOH . D 4 HOH A 256 656 259 HOH HOH . D 4 HOH A 257 657 261 HOH HOH . D 4 HOH A 258 658 262 HOH HOH . D 4 HOH A 259 659 263 HOH HOH . D 4 HOH A 260 660 264 HOH HOH . D 4 HOH A 261 661 266 HOH HOH . D 4 HOH A 262 662 267 HOH HOH . D 4 HOH A 263 663 268 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 QUS . . . B 2 -4.594 18.883 20.23 1 11.02 ? C01 QUS 301 A 1 HETATM 2 C C02 QUS . . . B 2 -4.282 20.384 20.24 1 12.41 ? C02 QUS 301 A 1 HETATM 3 C C03 QUS . . . B 2 -4.379 20.812 18.769 1 12.79 ? C03 QUS 301 A 1 HETATM 4 C C04 QUS . . . B 2 -6.111 22.677 18.987 1 12.87 ? C04 QUS 301 A 1 HETATM 5 C C05 QUS . . . B 2 -4.631 24.364 19.154 1 14.49 ? C05 QUS 301 A 1 HETATM 6 N NP3 QUS . . . B 2 -2.935 20.482 20.889 1 11.91 ? NP3 QUS 301 A 1 HETATM 7 N N14 QUS . . . B 2 -4.867 22.199 18.665 1 13.97 ? N14 QUS 301 A 1 HETATM 8 N N15 QUS . . . B 2 -5.932 23.989 19.271 1 14.84 ? N15 QUS 301 A 1 HETATM 9 O O16 QUS . . . B 2 -3.787 18.099 20.746 1 10.82 ? O16 QUS 301 A 1 HETATM 10 O O17 QUS . . . B 2 -5.661 18.524 19.708 1 10.74 ? O17 QUS 301 A 1 HETATM 11 O O18 QUS . . . B 2 -7.101 22.018 18.997 1 13.65 ? O18 QUS 301 A 1 HETATM 12 O O19 QUS . . . B 2 -4.108 25.439 19.332 1 14 ? O19 QUS 301 A 1 HETATM 13 O O20 QUS . . . B 2 -3.909 23.263 18.772 1 13.27 ? O20 QUS 301 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #