data_4F3D # _model_server_result.job_id foBD2l4vjLCEcZblqKy3TQ _model_server_result.datetime_utc '2024-11-08 13:50:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f3d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 4F3D # _exptl.entry_id 4F3D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4F3D _cell.length_a 175.258 _cell.length_b 175.258 _cell.length_c 86.449 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F3D _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 180 A HIS 180 1_555 C FE FE2 . A FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc2 A NE2 HIS 241 A HIS 241 1_555 C FE FE2 . A FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc3 A NE2 HIS 313 A HIS 313 1_555 C FE FE2 . A FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc4 A NE2 HIS 527 A HIS 527 1_555 C FE FE2 . A FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc5 B NE2 HIS 180 B HIS 180 1_555 F FE FE2 . B FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc6 B NE2 HIS 241 B HIS 241 1_555 F FE FE2 . B FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc7 B NE2 HIS 313 B HIS 313 1_555 F FE FE2 . B FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc8 B NE2 HIS 527 B HIS 527 1_555 F FE FE2 . B FE2 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4F3D _atom_sites.fract_transf_matrix[1][1] 0.005706 _atom_sites.fract_transf_matrix[1][2] 0.003294 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006589 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011568 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE2 A 1 601 1 FE2 FE2 . D 3 ETX A 1 602 1 ETX ETX . E 3 ETX A 1 603 1 ETX ETX . F 2 FE2 B 1 601 2 FE2 FE2 . G 3 ETX B 1 602 1 ETX ETX . H 4 HOH A 1 701 3 HOH HOH . H 4 HOH A 2 702 13 HOH HOH . H 4 HOH A 3 703 14 HOH HOH . H 4 HOH A 4 704 16 HOH HOH . H 4 HOH A 5 705 17 HOH HOH . H 4 HOH A 6 706 18 HOH HOH . H 4 HOH A 7 707 19 HOH HOH . H 4 HOH A 8 708 20 HOH HOH . H 4 HOH A 9 709 21 HOH HOH . H 4 HOH A 10 710 23 HOH HOH . H 4 HOH A 11 711 25 HOH HOH . H 4 HOH A 12 712 27 HOH HOH . H 4 HOH A 13 713 28 HOH HOH . H 4 HOH A 14 714 30 HOH HOH . H 4 HOH A 15 715 31 HOH HOH . H 4 HOH A 16 716 33 HOH HOH . H 4 HOH A 17 717 34 HOH HOH . H 4 HOH A 18 718 36 HOH HOH . H 4 HOH A 19 719 39 HOH HOH . H 4 HOH A 20 720 40 HOH HOH . H 4 HOH A 21 721 46 HOH HOH . H 4 HOH A 22 722 47 HOH HOH . H 4 HOH A 23 723 48 HOH HOH . H 4 HOH A 24 724 50 HOH HOH . H 4 HOH A 25 725 51 HOH HOH . H 4 HOH A 26 726 52 HOH HOH . H 4 HOH A 27 727 54 HOH HOH . H 4 HOH A 28 728 55 HOH HOH . H 4 HOH A 29 729 56 HOH HOH . H 4 HOH A 30 730 57 HOH HOH . H 4 HOH A 31 731 66 HOH HOH . H 4 HOH A 32 732 68 HOH HOH . H 4 HOH A 33 733 69 HOH HOH . H 4 HOH A 34 734 70 HOH HOH . H 4 HOH A 35 735 71 HOH HOH . H 4 HOH A 36 736 72 HOH HOH . H 4 HOH A 37 737 73 HOH HOH . H 4 HOH A 38 738 75 HOH HOH . H 4 HOH A 39 739 91 HOH HOH . H 4 HOH A 40 740 92 HOH HOH . H 4 HOH A 41 741 94 HOH HOH . H 4 HOH A 42 742 95 HOH HOH . H 4 HOH A 43 743 98 HOH HOH . H 4 HOH A 44 744 99 HOH HOH . H 4 HOH A 45 745 103 HOH HOH . H 4 HOH A 46 746 104 HOH HOH . H 4 HOH A 47 747 105 HOH HOH . H 4 HOH A 48 748 106 HOH HOH . H 4 HOH A 49 749 107 HOH HOH . H 4 HOH A 50 750 108 HOH HOH . H 4 HOH A 51 751 109 HOH HOH . H 4 HOH A 52 752 110 HOH HOH . H 4 HOH A 53 753 111 HOH HOH . H 4 HOH A 54 754 112 HOH HOH . H 4 HOH A 55 755 113 HOH HOH . H 4 HOH A 56 756 114 HOH HOH . H 4 HOH A 57 757 115 HOH HOH . H 4 HOH A 58 758 122 HOH HOH . H 4 HOH A 59 759 123 HOH HOH . H 4 HOH A 60 760 124 HOH HOH . I 4 HOH B 1 701 2 HOH HOH . I 4 HOH B 2 702 6 HOH HOH . I 4 HOH B 3 703 11 HOH HOH . I 4 HOH B 4 704 12 HOH HOH . I 4 HOH B 5 705 15 HOH HOH . I 4 HOH B 6 706 22 HOH HOH . I 4 HOH B 7 707 24 HOH HOH . I 4 HOH B 8 708 26 HOH HOH . I 4 HOH B 9 709 29 HOH HOH . I 4 HOH B 10 710 32 HOH HOH . I 4 HOH B 11 711 35 HOH HOH . I 4 HOH B 12 712 37 HOH HOH . I 4 HOH B 13 713 38 HOH HOH . I 4 HOH B 14 714 41 HOH HOH . I 4 HOH B 15 715 42 HOH HOH . I 4 HOH B 16 716 43 HOH HOH . I 4 HOH B 17 717 44 HOH HOH . I 4 HOH B 18 718 45 HOH HOH . I 4 HOH B 19 719 49 HOH HOH . I 4 HOH B 20 720 53 HOH HOH . I 4 HOH B 21 721 59 HOH HOH . I 4 HOH B 22 722 60 HOH HOH . I 4 HOH B 23 723 61 HOH HOH . I 4 HOH B 24 724 62 HOH HOH . I 4 HOH B 25 725 63 HOH HOH . I 4 HOH B 26 726 64 HOH HOH . I 4 HOH B 27 727 65 HOH HOH . I 4 HOH B 28 728 67 HOH HOH . I 4 HOH B 29 729 74 HOH HOH . I 4 HOH B 30 730 76 HOH HOH . I 4 HOH B 31 731 77 HOH HOH . I 4 HOH B 32 732 79 HOH HOH . I 4 HOH B 33 733 81 HOH HOH . I 4 HOH B 34 734 82 HOH HOH . I 4 HOH B 35 735 83 HOH HOH . I 4 HOH B 36 736 84 HOH HOH . I 4 HOH B 37 737 85 HOH HOH . I 4 HOH B 38 738 86 HOH HOH . I 4 HOH B 39 739 87 HOH HOH . I 4 HOH B 40 740 88 HOH HOH . I 4 HOH B 41 741 89 HOH HOH . I 4 HOH B 42 742 90 HOH HOH . I 4 HOH B 43 743 93 HOH HOH . I 4 HOH B 44 744 96 HOH HOH . I 4 HOH B 45 745 97 HOH HOH . I 4 HOH B 46 746 100 HOH HOH . I 4 HOH B 47 747 101 HOH HOH . I 4 HOH B 48 748 102 HOH HOH . I 4 HOH B 49 749 116 HOH HOH . I 4 HOH B 50 750 117 HOH HOH . I 4 HOH B 51 751 118 HOH HOH . I 4 HOH B 52 752 119 HOH HOH . I 4 HOH B 53 753 120 HOH HOH . I 4 HOH B 54 754 121 HOH HOH . I 4 HOH B 55 755 125 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.301 _atom_site.Cartn_y 59.662 _atom_site.Cartn_z -33.552 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #