data_4F3S # _model_server_result.job_id Mz-g7SQEWg87dCk15jrmmA _model_server_result.datetime_utc '2024-11-05 00:12:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f3s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4F3S # _exptl.entry_id 4F3S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4F3S _cell.length_a 80.406 _cell.length_b 80.406 _cell.length_c 187.041 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F3S _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 21 A PRO 21 1_555 A N MSE 22 A MSE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? covale ? covale2 A C MSE 22 A MSE 22 1_555 A N LEU 23 A LEU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale3 A C GLY 59 A GLY 59 1_555 A N MSE 60 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale4 A C MSE 60 A MSE 60 1_555 A N LEU 61 A LEU 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale5 A C SER 101 A SER 101 1_555 A N MSE 102 A MSE 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 102 A MSE 102 1_555 A N ALA 103 A ALA 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale7 A C GLY 125 A GLY 125 1_555 A N MSE 126 A MSE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale8 A C MSE 126 A MSE 126 1_555 A N ALA 127 A ALA 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C THR 156 A THR 156 1_555 A N MSE 157 A MSE 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 A C MSE 157 A MSE 157 1_555 A N ALA 158 A ALA 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale11 A C LYS 183 A LYS 183 1_555 A N MSE 184 A MSE 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C MSE 184 A MSE 184 1_555 A N PRO 185 A PRO 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale13 A C TRP 231 A TRP 231 1_555 A N MSE 232 A MSE 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale14 A C MSE 232 A MSE 232 1_555 A N LYS 233 A LYS 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4F3S _atom_sites.fract_transf_matrix[1][1] 0.012437 _atom_sites.fract_transf_matrix[1][2] 0.00718 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLY A 1 301 400 GLY GLY . C 3 DAL A 1 302 501 DAL DAL . D 4 PO4 A 1 303 256 PO4 PO4 . E 5 HOH A 1 401 2 HOH HOH . E 5 HOH A 2 402 3 HOH HOH . E 5 HOH A 3 403 4 HOH HOH . E 5 HOH A 4 404 5 HOH HOH . E 5 HOH A 5 405 6 HOH HOH . E 5 HOH A 6 406 7 HOH HOH . E 5 HOH A 7 407 8 HOH HOH . E 5 HOH A 8 408 9 HOH HOH . E 5 HOH A 9 409 10 HOH HOH . E 5 HOH A 10 410 11 HOH HOH . E 5 HOH A 11 411 12 HOH HOH . E 5 HOH A 12 412 13 HOH HOH . E 5 HOH A 13 413 14 HOH HOH . E 5 HOH A 14 414 15 HOH HOH . E 5 HOH A 15 415 16 HOH HOH . E 5 HOH A 16 416 17 HOH HOH . E 5 HOH A 17 417 18 HOH HOH . E 5 HOH A 18 418 19 HOH HOH . E 5 HOH A 19 419 21 HOH HOH . E 5 HOH A 20 420 22 HOH HOH . E 5 HOH A 21 421 23 HOH HOH . E 5 HOH A 22 422 24 HOH HOH . E 5 HOH A 23 423 25 HOH HOH . E 5 HOH A 24 424 26 HOH HOH . E 5 HOH A 25 425 27 HOH HOH . E 5 HOH A 26 426 28 HOH HOH . E 5 HOH A 27 427 29 HOH HOH . E 5 HOH A 28 428 30 HOH HOH . E 5 HOH A 29 429 31 HOH HOH . E 5 HOH A 30 430 32 HOH HOH . E 5 HOH A 31 431 33 HOH HOH . E 5 HOH A 32 432 34 HOH HOH . E 5 HOH A 33 433 35 HOH HOH . E 5 HOH A 34 434 36 HOH HOH . E 5 HOH A 35 435 37 HOH HOH . E 5 HOH A 36 436 38 HOH HOH . E 5 HOH A 37 437 39 HOH HOH . E 5 HOH A 38 438 40 HOH HOH . E 5 HOH A 39 439 41 HOH HOH . E 5 HOH A 40 440 42 HOH HOH . E 5 HOH A 41 441 43 HOH HOH . E 5 HOH A 42 442 44 HOH HOH . E 5 HOH A 43 443 45 HOH HOH . E 5 HOH A 44 444 46 HOH HOH . E 5 HOH A 45 445 47 HOH HOH . E 5 HOH A 46 446 48 HOH HOH . E 5 HOH A 47 447 49 HOH HOH . E 5 HOH A 48 448 50 HOH HOH . E 5 HOH A 49 449 51 HOH HOH . E 5 HOH A 50 450 52 HOH HOH . E 5 HOH A 51 451 53 HOH HOH . E 5 HOH A 52 452 54 HOH HOH . E 5 HOH A 53 453 55 HOH HOH . E 5 HOH A 54 454 56 HOH HOH . E 5 HOH A 55 455 57 HOH HOH . E 5 HOH A 56 456 58 HOH HOH . E 5 HOH A 57 457 59 HOH HOH . E 5 HOH A 58 458 60 HOH HOH . E 5 HOH A 59 459 61 HOH HOH . E 5 HOH A 60 460 62 HOH HOH . E 5 HOH A 61 461 63 HOH HOH . E 5 HOH A 62 462 64 HOH HOH . E 5 HOH A 63 463 65 HOH HOH . E 5 HOH A 64 464 66 HOH HOH . E 5 HOH A 65 465 67 HOH HOH . E 5 HOH A 66 466 68 HOH HOH . E 5 HOH A 67 467 69 HOH HOH . E 5 HOH A 68 468 70 HOH HOH . E 5 HOH A 69 469 71 HOH HOH . E 5 HOH A 70 470 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 4 11.789 20.193 24.961 0.5 52.03 ? P PO4 303 A 1 HETATM 2 O O1 PO4 . . . D 4 11.484 20.151 23.493 0.5 47.77 ? O1 PO4 303 A 1 HETATM 3 O O2 PO4 . . . D 4 13.185 20.746 25.205 0.5 47.71 ? O2 PO4 303 A 1 HETATM 4 O O3 PO4 . . . D 4 10.786 21.109 25.62 0.5 48.67 ? O3 PO4 303 A 1 HETATM 5 O O4 PO4 . . . D 4 11.678 18.77 25.487 0.5 47.86 ? O4 PO4 303 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #