data_4F42 # _model_server_result.job_id EyaKMGAYl63by1kZ3R3j-w _model_server_result.datetime_utc '2024-12-05 03:15:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f42 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 4F42 # _exptl.entry_id 4F42 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 199.184 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-MERCAPTO-2-NITRO-BENZOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F42 _cell.length_a 53.44 _cell.length_b 53.44 _cell.length_c 78.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F42 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C7 H5 N O4 S' _chem_comp.formula_weight 199.184 _chem_comp.id MNB _chem_comp.mon_nstd_flag . _chem_comp.name '5-MERCAPTO-2-NITRO-BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 MNB doub 237 n y C6 C5 MNB sing 238 n y C6 HC6 MNB sing 239 n n C1 C2 MNB sing 240 n y C1 C10 MNB sing 241 n n C2 C3 MNB doub 242 n y C2 N7 MNB sing 243 n n C3 C4 MNB sing 244 n y C3 HC3 MNB sing 245 n n C4 C5 MNB doub 246 n y C4 HC4 MNB sing 247 n n C5 S5 MNB sing 248 n n S5 HS5 MNB sing 249 n n C10 O12 MNB sing 250 n n C10 O11 MNB doub 251 n n O12 H12 MNB sing 252 n n N7 O9 MNB doub 253 n n N7 O8 MNB sing 254 n n # _atom_sites.entry_id 4F42 _atom_sites.fract_transf_matrix[1][1] 0.018713 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012753 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MNB A 1 101 101 MNB MNB . C 2 MNB A 1 102 102 MNB MNB . D 3 HOH A 1 201 201 HOH HOH . D 3 HOH A 2 202 202 HOH HOH . D 3 HOH A 3 203 203 HOH HOH . D 3 HOH A 4 204 204 HOH HOH . D 3 HOH A 5 205 205 HOH HOH . D 3 HOH A 6 206 206 HOH HOH . D 3 HOH A 7 207 207 HOH HOH . D 3 HOH A 8 208 208 HOH HOH . D 3 HOH A 9 209 209 HOH HOH . D 3 HOH A 10 210 210 HOH HOH . D 3 HOH A 11 211 211 HOH HOH . D 3 HOH A 12 212 212 HOH HOH . D 3 HOH A 13 213 213 HOH HOH . D 3 HOH A 14 214 214 HOH HOH . D 3 HOH A 15 215 215 HOH HOH . D 3 HOH A 16 216 216 HOH HOH . D 3 HOH A 17 217 217 HOH HOH . D 3 HOH A 18 218 218 HOH HOH . D 3 HOH A 19 219 219 HOH HOH . D 3 HOH A 20 220 220 HOH HOH . D 3 HOH A 21 221 221 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 MNB . . . C 2 16.34 12.847 20.449 1 30 ? C6 MNB 102 A 1 HETATM 2 C C1 MNB . . . C 2 15.136 12.838 21.15 1 31.6 ? C1 MNB 102 A 1 HETATM 3 C C2 MNB . . . C 2 13.941 13.528 20.556 1 32.17 ? C2 MNB 102 A 1 HETATM 4 C C3 MNB . . . C 2 14.077 14.145 19.314 1 31.33 ? C3 MNB 102 A 1 HETATM 5 C C4 MNB . . . C 2 15.299 14.123 18.66 1 30.36 ? C4 MNB 102 A 1 HETATM 6 C C5 MNB . . . C 2 16.409 13.489 19.213 1 29.86 ? C5 MNB 102 A 1 HETATM 7 S S5 MNB . . . C 2 17.859 13.509 18.337 1 27.8 ? S5 MNB 102 A 1 HETATM 8 C C10 MNB . . . C 2 15.088 12.151 22.483 1 31.91 ? C10 MNB 102 A 1 HETATM 9 O O12 MNB . . . C 2 15.418 12.816 23.483 1 33.81 ? O12 MNB 102 A 1 HETATM 10 O O11 MNB . . . C 2 14.732 10.954 22.575 1 31.45 ? O11 MNB 102 A 1 HETATM 11 N N7 MNB . . . C 2 12.68 13.567 21.182 1 33.22 ? N7 MNB 102 A 1 HETATM 12 O O9 MNB . . . C 2 11.813 14.325 20.778 1 32.64 ? O9 MNB 102 A 1 HETATM 13 O O8 MNB . . . C 2 12.414 12.833 22.12 1 35.01 ? O8 MNB 102 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #