data_4F44 # _model_server_result.job_id Hw-gFnU2ynw3PXt88IYUgQ _model_server_result.datetime_utc '2024-10-19 13:18:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f44 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4F44 # _exptl.entry_id 4F44 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 199.184 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-MERCAPTO-2-NITRO-BENZOIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4F44 _cell.length_a 53.372 _cell.length_b 53.372 _cell.length_c 73.486 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F44 _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 47 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 47 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 47 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 47 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.02 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C7 H5 N O4 S' _chem_comp.formula_weight 199.184 _chem_comp.id MNB _chem_comp.mon_nstd_flag . _chem_comp.name '5-MERCAPTO-2-NITRO-BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 MNB doub 237 n y C6 C5 MNB sing 238 n y C6 HC6 MNB sing 239 n n C1 C2 MNB sing 240 n y C1 C10 MNB sing 241 n n C2 C3 MNB doub 242 n y C2 N7 MNB sing 243 n n C3 C4 MNB sing 244 n y C3 HC3 MNB sing 245 n n C4 C5 MNB doub 246 n y C4 HC4 MNB sing 247 n n C5 S5 MNB sing 248 n n S5 HS5 MNB sing 249 n n C10 O12 MNB sing 250 n n C10 O11 MNB doub 251 n n O12 H12 MNB sing 252 n n N7 O9 MNB doub 253 n n N7 O8 MNB sing 254 n n # _atom_sites.entry_id 4F44 _atom_sites.fract_transf_matrix[1][1] 0.018736 _atom_sites.fract_transf_matrix[1][2] 0.010817 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021635 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013608 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MNB A 1 101 101 MNB MNB . D 2 MNB B 1 101 101 MNB MNB . E 3 HOH A 1 201 202 HOH HOH . E 3 HOH A 2 202 203 HOH HOH . E 3 HOH A 3 203 204 HOH HOH . E 3 HOH A 4 204 205 HOH HOH . E 3 HOH A 5 205 206 HOH HOH . E 3 HOH A 6 206 207 HOH HOH . E 3 HOH A 7 207 208 HOH HOH . E 3 HOH A 8 208 209 HOH HOH . E 3 HOH A 9 209 210 HOH HOH . E 3 HOH A 10 210 211 HOH HOH . E 3 HOH A 11 211 212 HOH HOH . E 3 HOH A 12 212 213 HOH HOH . E 3 HOH A 13 213 214 HOH HOH . E 3 HOH A 14 214 215 HOH HOH . E 3 HOH A 15 215 216 HOH HOH . E 3 HOH A 16 216 217 HOH HOH . E 3 HOH A 17 217 218 HOH HOH . E 3 HOH A 18 218 219 HOH HOH . E 3 HOH A 19 219 220 HOH HOH . E 3 HOH A 20 220 221 HOH HOH . E 3 HOH A 21 221 222 HOH HOH . E 3 HOH A 22 222 223 HOH HOH . E 3 HOH A 23 223 201 HOH HOH . F 3 HOH B 1 201 201 HOH HOH . F 3 HOH B 2 202 224 HOH HOH . F 3 HOH B 3 203 202 HOH HOH . F 3 HOH B 4 204 203 HOH HOH . F 3 HOH B 5 205 204 HOH HOH . F 3 HOH B 6 206 205 HOH HOH . F 3 HOH B 7 207 206 HOH HOH . F 3 HOH B 8 208 207 HOH HOH . F 3 HOH B 9 209 208 HOH HOH . F 3 HOH B 10 210 209 HOH HOH . F 3 HOH B 11 211 210 HOH HOH . F 3 HOH B 12 212 211 HOH HOH . F 3 HOH B 13 213 212 HOH HOH . F 3 HOH B 14 214 213 HOH HOH . F 3 HOH B 15 215 214 HOH HOH . F 3 HOH B 16 216 215 HOH HOH . F 3 HOH B 17 217 216 HOH HOH . F 3 HOH B 18 218 217 HOH HOH . F 3 HOH B 19 219 218 HOH HOH . F 3 HOH B 20 220 219 HOH HOH . F 3 HOH B 21 221 220 HOH HOH . F 3 HOH B 22 222 221 HOH HOH . F 3 HOH B 23 223 222 HOH HOH . F 3 HOH B 24 224 223 HOH HOH . F 3 HOH B 25 225 224 HOH HOH . F 3 HOH B 26 226 225 HOH HOH . F 3 HOH B 27 227 226 HOH HOH . F 3 HOH B 28 228 227 HOH HOH . F 3 HOH B 29 229 228 HOH HOH . F 3 HOH B 30 230 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 MNB . . . D 2 -36.219 32.873 0.666 1 67.48 ? C6 MNB 101 B 1 HETATM 2 C C1 MNB . . . D 2 -35.027 33.472 1.061 1 68.74 ? C1 MNB 101 B 1 HETATM 3 C C2 MNB . . . D 2 -33.952 32.617 1.635 1 69.2 ? C2 MNB 101 B 1 HETATM 4 C C3 MNB . . . D 2 -34.16 31.243 1.758 1 68.25 ? C3 MNB 101 B 1 HETATM 5 C C4 MNB . . . D 2 -35.369 30.693 1.348 1 67.07 ? C4 MNB 101 B 1 HETATM 6 C C5 MNB . . . D 2 -36.379 31.497 0.812 1 66.74 ? C5 MNB 101 B 1 HETATM 7 S S5 MNB . . . D 2 -37.851 30.771 0.319 1 62.99 ? S5 MNB 101 B 1 HETATM 8 C C10 MNB . . . D 2 -34.823 34.956 0.91 1 69.33 ? C10 MNB 101 B 1 HETATM 9 O O12 MNB . . . D 2 -34.774 35.648 1.951 1 69.23 ? O12 MNB 101 B 1 HETATM 10 O O11 MNB . . . D 2 -34.687 35.454 -0.238 1 69.04 ? O11 MNB 101 B 1 HETATM 11 N N7 MNB . . . D 2 -32.735 33.183 2.044 1 70.23 ? N7 MNB 101 B 1 HETATM 12 O O9 MNB . . . D 2 -32.288 32.941 3.157 1 70.62 ? O9 MNB 101 B 1 HETATM 13 O O8 MNB . . . D 2 -32.122 33.924 1.288 1 69.91 ? O8 MNB 101 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #