data_4F4Q # _model_server_result.job_id aaE_hR5FV30ph-rvzvJxfw _model_server_result.datetime_utc '2024-11-15 12:06:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f4q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 4F4Q # _exptl.entry_id 4F4Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F4Q _cell.length_a 39.924 _cell.length_b 64.309 _cell.length_c 202.841 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F4Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 394 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 394 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id NBE _struct_conn.ptnr2_label_comp_id 0SK _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 0SK _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.745 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 132 n n PA O2A FAD sing 133 n n PA O5B FAD sing 134 n n PA O3P FAD sing 135 n n O2A HOA2 FAD sing 136 n n O5B C5B FAD sing 137 n n C5B C4B FAD sing 138 n n C5B H51A FAD sing 139 n n C5B H52A FAD sing 140 n n C4B O4B FAD sing 141 n n C4B C3B FAD sing 142 n n C4B H4B FAD sing 143 n n O4B C1B FAD sing 144 n n C3B O3B FAD sing 145 n n C3B C2B FAD sing 146 n n C3B H3B FAD sing 147 n n O3B HO3A FAD sing 148 n n C2B O2B FAD sing 149 n n C2B C1B FAD sing 150 n n C2B H2B FAD sing 151 n n O2B HO2A FAD sing 152 n n C1B N9A FAD sing 153 n n C1B H1B FAD sing 154 n n N9A C8A FAD sing 155 n y N9A C4A FAD sing 156 n y C8A N7A FAD doub 157 n y C8A H8A FAD sing 158 n n N7A C5A FAD sing 159 n y C5A C6A FAD sing 160 n y C5A C4A FAD doub 161 n y C6A N6A FAD sing 162 n n C6A N1A FAD doub 163 n y N6A H61A FAD sing 164 n n N6A H62A FAD sing 165 n n N1A C2A FAD sing 166 n y C2A N3A FAD doub 167 n y C2A H2A FAD sing 168 n n N3A C4A FAD sing 169 n y N1 C2 FAD sing 170 n n N1 C10 FAD doub 171 n n C2 O2 FAD doub 172 n n C2 N3 FAD sing 173 n n N3 C4 FAD sing 174 n n N3 HN3 FAD sing 175 n n C4 O4 FAD doub 176 n n C4 C4X FAD sing 177 n n C4X N5 FAD doub 178 n n C4X C10 FAD sing 179 n n N5 C5X FAD sing 180 n n C5X C6 FAD doub 181 n y C5X C9A FAD sing 182 n y C6 C7 FAD sing 183 n y C6 H6 FAD sing 184 n n C7 C7M FAD sing 185 n n C7 C8 FAD doub 186 n y C7M HM71 FAD sing 187 n n C7M HM72 FAD sing 188 n n C7M HM73 FAD sing 189 n n C8 C8M FAD sing 190 n n C8 C9 FAD sing 191 n y C8M HM81 FAD sing 192 n n C8M HM82 FAD sing 193 n n C8M HM83 FAD sing 194 n n C9 C9A FAD doub 195 n y C9 H9 FAD sing 196 n n C9A N10 FAD sing 197 n n N10 C10 FAD sing 198 n n N10 C1' FAD sing 199 n n C1' C2' FAD sing 200 n n C1' "H1'1" FAD sing 201 n n C1' "H1'2" FAD sing 202 n n C2' O2' FAD sing 203 n n C2' C3' FAD sing 204 n n C2' H2' FAD sing 205 n n O2' HO2' FAD sing 206 n n C3' O3' FAD sing 207 n n C3' C4' FAD sing 208 n n C3' H3' FAD sing 209 n n O3' HO3' FAD sing 210 n n C4' O4' FAD sing 211 n n C4' C5' FAD sing 212 n n C4' H4' FAD sing 213 n n O4' HO4' FAD sing 214 n n C5' O5' FAD sing 215 n n C5' "H5'1" FAD sing 216 n n C5' "H5'2" FAD sing 217 n n O5' P FAD sing 218 n n P O1P FAD doub 219 n n P O2P FAD sing 220 n n P O3P FAD sing 221 n n O2P HOP2 FAD sing 222 n n # _atom_sites.entry_id 4F4Q _atom_sites.fract_transf_matrix[1][1] 0.025048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00493 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0SK A 1 501 394 0SK DRG . C 3 FAD A 1 502 600 FAD FAD . D 4 GOL A 1 503 1 GOL GOL . E 5 HOH A 1 601 2 HOH HOH . E 5 HOH A 2 602 3 HOH HOH . E 5 HOH A 3 603 6 HOH HOH . E 5 HOH A 4 604 7 HOH HOH . E 5 HOH A 5 605 8 HOH HOH . E 5 HOH A 6 606 9 HOH HOH . E 5 HOH A 7 607 10 HOH HOH . E 5 HOH A 8 608 11 HOH HOH . E 5 HOH A 9 609 12 HOH HOH . E 5 HOH A 10 610 16 HOH HOH . E 5 HOH A 11 611 17 HOH HOH . E 5 HOH A 12 612 18 HOH HOH . E 5 HOH A 13 613 19 HOH HOH . E 5 HOH A 14 614 21 HOH HOH . E 5 HOH A 15 615 22 HOH HOH . E 5 HOH A 16 616 23 HOH HOH . E 5 HOH A 17 617 24 HOH HOH . E 5 HOH A 18 618 25 HOH HOH . E 5 HOH A 19 619 26 HOH HOH . E 5 HOH A 20 620 27 HOH HOH . E 5 HOH A 21 621 28 HOH HOH . E 5 HOH A 22 622 29 HOH HOH . E 5 HOH A 23 623 30 HOH HOH . E 5 HOH A 24 624 31 HOH HOH . E 5 HOH A 25 625 32 HOH HOH . E 5 HOH A 26 626 33 HOH HOH . E 5 HOH A 27 627 34 HOH HOH . E 5 HOH A 28 628 35 HOH HOH . E 5 HOH A 29 629 36 HOH HOH . E 5 HOH A 30 630 37 HOH HOH . E 5 HOH A 31 631 46 HOH HOH . E 5 HOH A 32 632 48 HOH HOH . E 5 HOH A 33 633 49 HOH HOH . E 5 HOH A 34 634 50 HOH HOH . E 5 HOH A 35 635 51 HOH HOH . E 5 HOH A 36 636 52 HOH HOH . E 5 HOH A 37 637 53 HOH HOH . E 5 HOH A 38 638 56 HOH HOH . E 5 HOH A 39 639 58 HOH HOH . E 5 HOH A 40 640 59 HOH HOH . E 5 HOH A 41 641 60 HOH HOH . E 5 HOH A 42 642 61 HOH HOH . E 5 HOH A 43 643 62 HOH HOH . E 5 HOH A 44 644 63 HOH HOH . E 5 HOH A 45 645 64 HOH HOH . E 5 HOH A 46 646 68 HOH HOH . E 5 HOH A 47 647 75 HOH HOH . E 5 HOH A 48 648 76 HOH HOH . E 5 HOH A 49 649 78 HOH HOH . E 5 HOH A 50 650 79 HOH HOH . E 5 HOH A 51 651 80 HOH HOH . E 5 HOH A 52 652 82 HOH HOH . E 5 HOH A 53 653 85 HOH HOH . E 5 HOH A 54 654 86 HOH HOH . E 5 HOH A 55 655 88 HOH HOH . E 5 HOH A 56 656 90 HOH HOH . E 5 HOH A 57 657 91 HOH HOH . E 5 HOH A 58 658 93 HOH HOH . E 5 HOH A 59 659 96 HOH HOH . E 5 HOH A 60 660 97 HOH HOH . E 5 HOH A 61 661 98 HOH HOH . E 5 HOH A 62 662 99 HOH HOH . E 5 HOH A 63 663 101 HOH HOH . E 5 HOH A 64 664 102 HOH HOH . E 5 HOH A 65 665 105 HOH HOH . E 5 HOH A 66 666 108 HOH HOH . E 5 HOH A 67 667 109 HOH HOH . E 5 HOH A 68 668 112 HOH HOH . E 5 HOH A 69 669 114 HOH HOH . E 5 HOH A 70 670 115 HOH HOH . E 5 HOH A 71 671 116 HOH HOH . E 5 HOH A 72 672 117 HOH HOH . E 5 HOH A 73 673 118 HOH HOH . E 5 HOH A 74 674 119 HOH HOH . E 5 HOH A 75 675 120 HOH HOH . E 5 HOH A 76 676 121 HOH HOH . E 5 HOH A 77 677 122 HOH HOH . E 5 HOH A 78 678 123 HOH HOH . E 5 HOH A 79 679 124 HOH HOH . E 5 HOH A 80 680 125 HOH HOH . E 5 HOH A 81 681 126 HOH HOH . E 5 HOH A 82 682 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 3 -8.909 -11.915 20.706 1 21.1 ? PA FAD 502 A 1 HETATM 2 O O1A FAD . . . C 3 -8.538 -12.063 22.162 1 20.82 ? O1A FAD 502 A 1 HETATM 3 O O2A FAD . . . C 3 -7.838 -11.955 19.648 1 20.97 ? O2A FAD 502 A 1 HETATM 4 O O5B FAD . . . C 3 -10.018 -13.021 20.337 1 20.94 ? O5B FAD 502 A 1 HETATM 5 C C5B FAD . . . C 3 -11.173 -13.177 21.163 1 21.02 ? C5B FAD 502 A 1 HETATM 6 C C4B FAD . . . C 3 -12.199 -14.094 20.499 1 21.12 ? C4B FAD 502 A 1 HETATM 7 O O4B FAD . . . C 3 -12.91 -13.361 19.504 1 21.12 ? O4B FAD 502 A 1 HETATM 8 C C3B FAD . . . C 3 -11.567 -15.293 19.808 1 20.81 ? C3B FAD 502 A 1 HETATM 9 O O3B FAD . . . C 3 -12.342 -16.459 20.083 1 20.62 ? O3B FAD 502 A 1 HETATM 10 C C2B FAD . . . C 3 -11.652 -14.98 18.336 1 20.76 ? C2B FAD 502 A 1 HETATM 11 O O2B FAD . . . C 3 -11.888 -16.171 17.586 1 20.71 ? O2B FAD 502 A 1 HETATM 12 C C1B FAD . . . C 3 -12.826 -14.026 18.248 1 21.04 ? C1B FAD 502 A 1 HETATM 13 N N9A FAD . . . C 3 -12.628 -13.024 17.185 1 21.21 ? N9A FAD 502 A 1 HETATM 14 C C8A FAD . . . C 3 -11.754 -12.001 17.193 1 21.56 ? C8A FAD 502 A 1 HETATM 15 N N7A FAD . . . C 3 -11.84 -11.277 16.049 1 21.67 ? N7A FAD 502 A 1 HETATM 16 C C5A FAD . . . C 3 -12.792 -11.848 15.286 1 21.8 ? C5A FAD 502 A 1 HETATM 17 C C6A FAD . . . C 3 -13.405 -11.595 13.96 1 21.65 ? C6A FAD 502 A 1 HETATM 18 N N6A FAD . . . C 3 -13.007 -10.561 13.182 1 21.81 ? N6A FAD 502 A 1 HETATM 19 N N1A FAD . . . C 3 -14.378 -12.44 13.55 1 21.69 ? N1A FAD 502 A 1 HETATM 20 C C2A FAD . . . C 3 -14.798 -13.481 14.299 1 21.68 ? C2A FAD 502 A 1 HETATM 21 N N3A FAD . . . C 3 -14.296 -13.767 15.512 1 21.65 ? N3A FAD 502 A 1 HETATM 22 C C4A FAD . . . C 3 -13.31 -13 16.046 1 21.67 ? C4A FAD 502 A 1 HETATM 23 N N1 FAD . . . C 3 -13.396 -8.089 28.828 1 25.38 ? N1 FAD 502 A 1 HETATM 24 C C2 FAD . . . C 3 -14.576 -7.596 29.279 1 25.51 ? C2 FAD 502 A 1 HETATM 25 O O2 FAD . . . C 3 -15.635 -8.105 28.853 1 25.36 ? O2 FAD 502 A 1 HETATM 26 N N3 FAD . . . C 3 -14.639 -6.582 30.167 1 25.56 ? N3 FAD 502 A 1 HETATM 27 C C4 FAD . . . C 3 -13.54 -5.986 30.659 1 25.49 ? C4 FAD 502 A 1 HETATM 28 O O4 FAD . . . C 3 -13.629 -5.045 31.477 1 25.51 ? O4 FAD 502 A 1 HETATM 29 C C4X FAD . . . C 3 -12.212 -6.468 30.209 1 25.26 ? C4X FAD 502 A 1 HETATM 30 N N5 FAD . . . C 3 -11.056 -5.929 30.656 1 25.6 ? N5 FAD 502 A 1 HETATM 31 C C5X FAD . . . C 3 -9.851 -6.385 30.23 1 25.73 ? C5X FAD 502 A 1 HETATM 32 C C6 FAD . . . C 3 -8.681 -5.796 30.714 1 25.83 ? C6 FAD 502 A 1 HETATM 33 C C7 FAD . . . C 3 -7.436 -6.253 30.289 1 25.84 ? C7 FAD 502 A 1 HETATM 34 C C7M FAD . . . C 3 -6.183 -5.604 30.823 1 25.95 ? C7M FAD 502 A 1 HETATM 35 C C8 FAD . . . C 3 -7.359 -7.376 29.307 1 25.95 ? C8 FAD 502 A 1 HETATM 36 C C8M FAD . . . C 3 -6.021 -7.89 28.83 1 25.84 ? C8M FAD 502 A 1 HETATM 37 C C9 FAD . . . C 3 -8.527 -7.966 28.822 1 25.41 ? C9 FAD 502 A 1 HETATM 38 C C9A FAD . . . C 3 -9.776 -7.513 29.247 1 25.43 ? C9A FAD 502 A 1 HETATM 39 N N10 FAD . . . C 3 -10.981 -8.091 28.768 1 25.08 ? N10 FAD 502 A 1 HETATM 40 C C10 FAD . . . C 3 -12.21 -7.586 29.24 1 25.15 ? C10 FAD 502 A 1 HETATM 41 C C1' FAD . . . C 3 -10.977 -9.197 27.805 1 24.57 ? C1' FAD 502 A 1 HETATM 42 C C2' FAD . . . C 3 -11.128 -8.696 26.367 1 23.96 ? C2' FAD 502 A 1 HETATM 43 O O2' FAD . . . C 3 -11.987 -7.549 26.294 1 23.08 ? O2' FAD 502 A 1 HETATM 44 C C3' FAD . . . C 3 -11.687 -9.815 25.491 1 23.55 ? C3' FAD 502 A 1 HETATM 45 O O3' FAD . . . C 3 -10.881 -10.984 25.655 1 24.12 ? O3' FAD 502 A 1 HETATM 46 C C4' FAD . . . C 3 -11.736 -9.476 24.005 1 23.07 ? C4' FAD 502 A 1 HETATM 47 O O4' FAD . . . C 3 -12.384 -10.572 23.362 1 23.27 ? O4' FAD 502 A 1 HETATM 48 C C5' FAD . . . C 3 -10.347 -9.282 23.398 1 22.74 ? C5' FAD 502 A 1 HETATM 49 O O5' FAD . . . C 3 -10.424 -8.754 22.073 1 22.02 ? O5' FAD 502 A 1 HETATM 50 P P FAD . . . C 3 -9.311 -9.122 20.963 1 21.1 ? P FAD 502 A 1 HETATM 51 O O1P FAD . . . C 3 -7.951 -9.201 21.603 1 21 ? O1P FAD 502 A 1 HETATM 52 O O2P FAD . . . C 3 -9.517 -8.194 19.796 1 21.62 ? O2P FAD 502 A 1 HETATM 53 O O3P FAD . . . C 3 -9.796 -10.581 20.513 1 21.24 ? O3P FAD 502 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 53 #