data_4F5Y # _model_server_result.job_id GxjzZg21EnwbgjLT4N5QuQ _model_server_result.datetime_utc '2024-11-29 00:32:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f5y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4F5Y # _exptl.entry_id 4F5Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F5Y _cell.length_a 73.145 _cell.length_b 81.438 _cell.length_c 91.347 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F5Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 57 A ASP 205 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc2 A OE2 GLU 168 A GLU 316 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc3 A OE1 GLU 168 A GLU 316 1_555 C CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc4 C CA CA . A CA 401 1_555 F O HOH . A HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.846 ? metalc ? metalc5 B OD2 ASP 57 B ASP 205 1_555 E CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.942 ? metalc ? metalc6 B OE2 GLU 168 B GLU 316 1_555 E CA CA . B CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4F5Y _atom_sites.fract_transf_matrix[1][1] 0.013671 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 401 500 CA CA . D 3 C2E A 1 402 400 C2E C2E . E 2 CA B 1 500 500 CA CA . F 4 HOH A 1 501 1 HOH HOH . F 4 HOH A 2 502 4 HOH HOH . F 4 HOH A 3 503 5 HOH HOH . F 4 HOH A 4 504 6 HOH HOH . F 4 HOH A 5 505 14 HOH HOH . F 4 HOH A 6 506 15 HOH HOH . F 4 HOH A 7 507 16 HOH HOH . F 4 HOH A 8 508 19 HOH HOH . F 4 HOH A 9 509 22 HOH HOH . F 4 HOH A 10 510 23 HOH HOH . F 4 HOH A 11 511 25 HOH HOH . F 4 HOH A 12 512 26 HOH HOH . F 4 HOH A 13 513 27 HOH HOH . F 4 HOH A 14 514 29 HOH HOH . F 4 HOH A 15 515 31 HOH HOH . F 4 HOH A 16 516 35 HOH HOH . F 4 HOH A 17 517 36 HOH HOH . F 4 HOH A 18 518 37 HOH HOH . F 4 HOH A 19 519 39 HOH HOH . F 4 HOH A 20 520 40 HOH HOH . F 4 HOH A 21 521 44 HOH HOH . F 4 HOH A 22 522 46 HOH HOH . F 4 HOH A 23 523 49 HOH HOH . F 4 HOH A 24 524 50 HOH HOH . F 4 HOH A 25 525 51 HOH HOH . F 4 HOH A 26 526 52 HOH HOH . F 4 HOH A 27 527 54 HOH HOH . F 4 HOH A 28 528 55 HOH HOH . F 4 HOH A 29 529 59 HOH HOH . F 4 HOH A 30 530 61 HOH HOH . F 4 HOH A 31 531 62 HOH HOH . F 4 HOH A 32 532 65 HOH HOH . F 4 HOH A 33 533 66 HOH HOH . F 4 HOH A 34 534 68 HOH HOH . F 4 HOH A 35 535 69 HOH HOH . F 4 HOH A 36 536 70 HOH HOH . F 4 HOH A 37 537 71 HOH HOH . F 4 HOH A 38 538 76 HOH HOH . F 4 HOH A 39 539 77 HOH HOH . F 4 HOH A 40 540 80 HOH HOH . F 4 HOH A 41 541 81 HOH HOH . F 4 HOH A 42 542 82 HOH HOH . F 4 HOH A 43 543 83 HOH HOH . F 4 HOH A 44 544 88 HOH HOH . F 4 HOH A 45 545 89 HOH HOH . F 4 HOH A 46 546 90 HOH HOH . F 4 HOH A 47 547 91 HOH HOH . F 4 HOH A 48 548 94 HOH HOH . F 4 HOH A 49 549 95 HOH HOH . F 4 HOH A 50 550 96 HOH HOH . F 4 HOH A 51 551 99 HOH HOH . F 4 HOH A 52 552 102 HOH HOH . F 4 HOH A 53 553 104 HOH HOH . F 4 HOH A 54 554 105 HOH HOH . F 4 HOH A 55 555 106 HOH HOH . F 4 HOH A 56 556 107 HOH HOH . F 4 HOH A 57 557 108 HOH HOH . F 4 HOH A 58 558 109 HOH HOH . F 4 HOH A 59 559 110 HOH HOH . F 4 HOH A 60 560 111 HOH HOH . F 4 HOH A 61 561 121 HOH HOH . F 4 HOH A 62 562 122 HOH HOH . F 4 HOH A 63 563 123 HOH HOH . F 4 HOH A 64 564 124 HOH HOH . F 4 HOH A 65 565 125 HOH HOH . F 4 HOH A 66 566 130 HOH HOH . F 4 HOH A 67 567 131 HOH HOH . F 4 HOH A 68 568 132 HOH HOH . F 4 HOH A 69 569 133 HOH HOH . F 4 HOH A 70 570 134 HOH HOH . F 4 HOH A 71 571 136 HOH HOH . G 4 HOH B 1 601 2 HOH HOH . G 4 HOH B 2 602 3 HOH HOH . G 4 HOH B 3 603 7 HOH HOH . G 4 HOH B 4 604 8 HOH HOH . G 4 HOH B 5 605 9 HOH HOH . G 4 HOH B 6 606 10 HOH HOH . G 4 HOH B 7 607 11 HOH HOH . G 4 HOH B 8 608 12 HOH HOH . G 4 HOH B 9 609 13 HOH HOH . G 4 HOH B 10 610 17 HOH HOH . G 4 HOH B 11 611 18 HOH HOH . G 4 HOH B 12 612 20 HOH HOH . G 4 HOH B 13 613 21 HOH HOH . G 4 HOH B 14 614 24 HOH HOH . G 4 HOH B 15 615 28 HOH HOH . G 4 HOH B 16 616 30 HOH HOH . G 4 HOH B 17 617 32 HOH HOH . G 4 HOH B 18 618 33 HOH HOH . G 4 HOH B 19 619 34 HOH HOH . G 4 HOH B 20 620 38 HOH HOH . G 4 HOH B 21 621 41 HOH HOH . G 4 HOH B 22 622 42 HOH HOH . G 4 HOH B 23 623 43 HOH HOH . G 4 HOH B 24 624 45 HOH HOH . G 4 HOH B 25 625 47 HOH HOH . G 4 HOH B 26 626 48 HOH HOH . G 4 HOH B 27 627 53 HOH HOH . G 4 HOH B 28 628 56 HOH HOH . G 4 HOH B 29 629 57 HOH HOH . G 4 HOH B 30 630 58 HOH HOH . G 4 HOH B 31 631 60 HOH HOH . G 4 HOH B 32 632 63 HOH HOH . G 4 HOH B 33 633 64 HOH HOH . G 4 HOH B 34 634 67 HOH HOH . G 4 HOH B 35 635 72 HOH HOH . G 4 HOH B 36 636 73 HOH HOH . G 4 HOH B 37 637 74 HOH HOH . G 4 HOH B 38 638 75 HOH HOH . G 4 HOH B 39 639 78 HOH HOH . G 4 HOH B 40 640 79 HOH HOH . G 4 HOH B 41 641 84 HOH HOH . G 4 HOH B 42 642 85 HOH HOH . G 4 HOH B 43 643 86 HOH HOH . G 4 HOH B 44 644 87 HOH HOH . G 4 HOH B 45 645 92 HOH HOH . G 4 HOH B 46 646 93 HOH HOH . G 4 HOH B 47 647 97 HOH HOH . G 4 HOH B 48 648 98 HOH HOH . G 4 HOH B 49 649 100 HOH HOH . G 4 HOH B 50 650 101 HOH HOH . G 4 HOH B 51 651 103 HOH HOH . G 4 HOH B 52 652 112 HOH HOH . G 4 HOH B 53 653 113 HOH HOH . G 4 HOH B 54 654 114 HOH HOH . G 4 HOH B 55 655 115 HOH HOH . G 4 HOH B 56 656 116 HOH HOH . G 4 HOH B 57 657 117 HOH HOH . G 4 HOH B 58 658 118 HOH HOH . G 4 HOH B 59 659 119 HOH HOH . G 4 HOH B 60 660 120 HOH HOH . G 4 HOH B 61 661 126 HOH HOH . G 4 HOH B 62 662 127 HOH HOH . G 4 HOH B 63 663 128 HOH HOH . G 4 HOH B 64 664 129 HOH HOH . G 4 HOH B 65 665 135 HOH HOH . G 4 HOH B 66 666 137 HOH HOH . G 4 HOH B 67 667 138 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.713 _atom_site.Cartn_y 0.127 _atom_site.Cartn_z 24.76 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #