data_4F6H # _model_server_result.job_id luhv146U-JFcBvK5BLMqag _model_server_result.datetime_utc '2024-11-08 09:09:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 4F6H # _exptl.entry_id 4F6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F6H _cell.length_a 50.016 _cell.length_b 60.499 _cell.length_c 84.287 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 77 A HIS 77 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc2 A ND1 HIS 79 A HIS 79 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc3 A NE2 HIS 139 A HIS 139 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 E O3 SO4 . A SO4 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc5 B ZN ZN . A ZN 301 1_555 E S SO4 . A SO4 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.902 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 241 n n P O2 PO4 sing 242 n n P O3 PO4 sing 243 n n P O4 PO4 sing 244 n n # _atom_sites.entry_id 4F6H _atom_sites.fract_transf_matrix[1][1] 0.019994 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016529 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 4 ZN ZN . C 3 PO4 A 1 302 8 PO4 PO4 . D 3 PO4 A 1 303 9 PO4 PO4 . E 4 SO4 A 1 304 1 SO4 SO4 . F 4 SO4 A 1 305 2 SO4 SO4 . G 5 HOH A 1 401 1 HOH HOH . G 5 HOH A 2 402 2 HOH HOH . G 5 HOH A 3 403 3 HOH HOH . G 5 HOH A 4 404 4 HOH HOH . G 5 HOH A 5 405 5 HOH HOH . G 5 HOH A 6 406 6 HOH HOH . G 5 HOH A 7 407 7 HOH HOH . G 5 HOH A 8 408 8 HOH HOH . G 5 HOH A 9 409 9 HOH HOH . G 5 HOH A 10 410 10 HOH HOH . G 5 HOH A 11 411 11 HOH HOH . G 5 HOH A 12 412 12 HOH HOH . G 5 HOH A 13 413 13 HOH HOH . G 5 HOH A 14 414 14 HOH HOH . G 5 HOH A 15 415 15 HOH HOH . G 5 HOH A 16 416 16 HOH HOH . G 5 HOH A 17 417 17 HOH HOH . G 5 HOH A 18 418 18 HOH HOH . G 5 HOH A 19 419 19 HOH HOH . G 5 HOH A 20 420 20 HOH HOH . G 5 HOH A 21 421 21 HOH HOH . G 5 HOH A 22 422 22 HOH HOH . G 5 HOH A 23 423 23 HOH HOH . G 5 HOH A 24 424 24 HOH HOH . G 5 HOH A 25 425 25 HOH HOH . G 5 HOH A 26 426 26 HOH HOH . G 5 HOH A 27 427 27 HOH HOH . G 5 HOH A 28 428 28 HOH HOH . G 5 HOH A 29 429 29 HOH HOH . G 5 HOH A 30 430 30 HOH HOH . G 5 HOH A 31 431 31 HOH HOH . G 5 HOH A 32 432 32 HOH HOH . G 5 HOH A 33 433 33 HOH HOH . G 5 HOH A 34 434 34 HOH HOH . G 5 HOH A 35 435 35 HOH HOH . G 5 HOH A 36 436 36 HOH HOH . G 5 HOH A 37 437 37 HOH HOH . G 5 HOH A 38 438 38 HOH HOH . G 5 HOH A 39 439 39 HOH HOH . G 5 HOH A 40 440 40 HOH HOH . G 5 HOH A 41 441 41 HOH HOH . G 5 HOH A 42 442 42 HOH HOH . G 5 HOH A 43 443 43 HOH HOH . G 5 HOH A 44 444 44 HOH HOH . G 5 HOH A 45 445 45 HOH HOH . G 5 HOH A 46 446 46 HOH HOH . G 5 HOH A 47 447 47 HOH HOH . G 5 HOH A 48 448 48 HOH HOH . G 5 HOH A 49 449 49 HOH HOH . G 5 HOH A 50 450 50 HOH HOH . G 5 HOH A 51 451 51 HOH HOH . G 5 HOH A 52 452 52 HOH HOH . G 5 HOH A 53 453 53 HOH HOH . G 5 HOH A 54 454 54 HOH HOH . G 5 HOH A 55 455 55 HOH HOH . G 5 HOH A 56 456 56 HOH HOH . G 5 HOH A 57 457 57 HOH HOH . G 5 HOH A 58 458 58 HOH HOH . G 5 HOH A 59 459 59 HOH HOH . G 5 HOH A 60 460 60 HOH HOH . G 5 HOH A 61 461 61 HOH HOH . G 5 HOH A 62 462 62 HOH HOH . G 5 HOH A 63 463 63 HOH HOH . G 5 HOH A 64 464 64 HOH HOH . G 5 HOH A 65 465 65 HOH HOH . G 5 HOH A 66 466 66 HOH HOH . G 5 HOH A 67 467 67 HOH HOH . G 5 HOH A 68 468 68 HOH HOH . G 5 HOH A 69 469 69 HOH HOH . G 5 HOH A 70 470 70 HOH HOH . G 5 HOH A 71 471 72 HOH HOH . G 5 HOH A 72 472 73 HOH HOH . G 5 HOH A 73 473 74 HOH HOH . G 5 HOH A 74 474 75 HOH HOH . G 5 HOH A 75 475 76 HOH HOH . G 5 HOH A 76 476 77 HOH HOH . G 5 HOH A 77 477 78 HOH HOH . G 5 HOH A 78 478 79 HOH HOH . G 5 HOH A 79 479 80 HOH HOH . G 5 HOH A 80 480 81 HOH HOH . G 5 HOH A 81 481 82 HOH HOH . G 5 HOH A 82 482 83 HOH HOH . G 5 HOH A 83 483 84 HOH HOH . G 5 HOH A 84 484 85 HOH HOH . G 5 HOH A 85 485 86 HOH HOH . G 5 HOH A 86 486 87 HOH HOH . G 5 HOH A 87 487 88 HOH HOH . G 5 HOH A 88 488 89 HOH HOH . G 5 HOH A 89 489 90 HOH HOH . G 5 HOH A 90 490 91 HOH HOH . G 5 HOH A 91 491 92 HOH HOH . G 5 HOH A 92 492 93 HOH HOH . G 5 HOH A 93 493 94 HOH HOH . G 5 HOH A 94 494 95 HOH HOH . G 5 HOH A 95 495 96 HOH HOH . G 5 HOH A 96 496 97 HOH HOH . G 5 HOH A 97 497 98 HOH HOH . G 5 HOH A 98 498 99 HOH HOH . G 5 HOH A 99 499 100 HOH HOH . G 5 HOH A 100 500 101 HOH HOH . G 5 HOH A 101 501 102 HOH HOH . G 5 HOH A 102 502 104 HOH HOH . G 5 HOH A 103 503 105 HOH HOH . G 5 HOH A 104 504 106 HOH HOH . G 5 HOH A 105 505 107 HOH HOH . G 5 HOH A 106 506 108 HOH HOH . G 5 HOH A 107 507 109 HOH HOH . G 5 HOH A 108 508 110 HOH HOH . G 5 HOH A 109 509 112 HOH HOH . G 5 HOH A 110 510 113 HOH HOH . G 5 HOH A 111 511 116 HOH HOH . G 5 HOH A 112 512 117 HOH HOH . G 5 HOH A 113 513 118 HOH HOH . G 5 HOH A 114 514 119 HOH HOH . G 5 HOH A 115 515 120 HOH HOH . G 5 HOH A 116 516 121 HOH HOH . G 5 HOH A 117 517 122 HOH HOH . G 5 HOH A 118 518 123 HOH HOH . G 5 HOH A 119 519 124 HOH HOH . G 5 HOH A 120 520 125 HOH HOH . G 5 HOH A 121 521 126 HOH HOH . G 5 HOH A 122 522 127 HOH HOH . G 5 HOH A 123 523 128 HOH HOH . G 5 HOH A 124 524 129 HOH HOH . G 5 HOH A 125 525 130 HOH HOH . G 5 HOH A 126 526 131 HOH HOH . G 5 HOH A 127 527 133 HOH HOH . G 5 HOH A 128 528 134 HOH HOH . G 5 HOH A 129 529 135 HOH HOH . G 5 HOH A 130 530 136 HOH HOH . G 5 HOH A 131 531 137 HOH HOH . G 5 HOH A 132 532 138 HOH HOH . G 5 HOH A 133 533 139 HOH HOH . G 5 HOH A 134 534 141 HOH HOH . G 5 HOH A 135 535 142 HOH HOH . G 5 HOH A 136 536 143 HOH HOH . G 5 HOH A 137 537 145 HOH HOH . G 5 HOH A 138 538 146 HOH HOH . G 5 HOH A 139 539 147 HOH HOH . G 5 HOH A 140 540 148 HOH HOH . G 5 HOH A 141 541 149 HOH HOH . G 5 HOH A 142 542 150 HOH HOH . G 5 HOH A 143 543 151 HOH HOH . G 5 HOH A 144 544 152 HOH HOH . G 5 HOH A 145 545 153 HOH HOH . G 5 HOH A 146 546 154 HOH HOH . G 5 HOH A 147 547 155 HOH HOH . G 5 HOH A 148 548 156 HOH HOH . G 5 HOH A 149 549 157 HOH HOH . G 5 HOH A 150 550 158 HOH HOH . G 5 HOH A 151 551 159 HOH HOH . G 5 HOH A 152 552 160 HOH HOH . G 5 HOH A 153 553 161 HOH HOH . G 5 HOH A 154 554 162 HOH HOH . G 5 HOH A 155 555 163 HOH HOH . G 5 HOH A 156 556 164 HOH HOH . G 5 HOH A 157 557 165 HOH HOH . G 5 HOH A 158 558 166 HOH HOH . G 5 HOH A 159 559 167 HOH HOH . G 5 HOH A 160 560 169 HOH HOH . G 5 HOH A 161 561 170 HOH HOH . G 5 HOH A 162 562 171 HOH HOH . G 5 HOH A 163 563 172 HOH HOH . G 5 HOH A 164 564 173 HOH HOH . G 5 HOH A 165 565 174 HOH HOH . G 5 HOH A 166 566 175 HOH HOH . G 5 HOH A 167 567 176 HOH HOH . G 5 HOH A 168 568 177 HOH HOH . G 5 HOH A 169 569 178 HOH HOH . G 5 HOH A 170 570 179 HOH HOH . G 5 HOH A 171 571 180 HOH HOH . G 5 HOH A 172 572 182 HOH HOH . G 5 HOH A 173 573 183 HOH HOH . G 5 HOH A 174 574 185 HOH HOH . G 5 HOH A 175 575 186 HOH HOH . G 5 HOH A 176 576 187 HOH HOH . G 5 HOH A 177 577 189 HOH HOH . G 5 HOH A 178 578 190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 24.753 39.951 15.535 1 79.05 ? P PO4 303 A 1 HETATM 2 O O1 PO4 . . . D 3 25.588 41.199 15.377 1 73.25 ? O1 PO4 303 A 1 HETATM 3 O O2 PO4 . . . D 3 23.329 40.262 15.135 1 82.98 ? O2 PO4 303 A 1 HETATM 4 O O3 PO4 . . . D 3 25.294 38.841 14.666 1 72.36 ? O3 PO4 303 A 1 HETATM 5 O O4 PO4 . . . D 3 24.783 39.511 16.981 1 86.73 ? O4 PO4 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #