data_4F6W # _model_server_result.job_id T0lxNNak0lxui0vRyZafkA _model_server_result.datetime_utc '2024-11-04 20:15:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f6w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":506}' # _entry.id 4F6W # _exptl.entry_id 4F6W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F6W _cell.length_a 71.123 _cell.length_b 71.71 _cell.length_c 171.871 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F6W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N ? 5 G N N ? 5 H N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 192 n n C1 C2 EDO sing 193 n n C1 H11 EDO sing 194 n n C1 H12 EDO sing 195 n n O1 HO1 EDO sing 196 n n C2 O2 EDO sing 197 n n C2 H21 EDO sing 198 n n C2 H22 EDO sing 199 n n O2 HO2 EDO sing 200 n n # _atom_sites.entry_id 4F6W _atom_sites.fract_transf_matrix[1][1] 0.01406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013945 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005818 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 0SS A 1 501 1 0SS UKN . D 4 DMS A 1 502 1 DMS DMS . E 5 EDO A 1 503 2 EDO EDO . F 5 EDO A 1 504 4 EDO EDO . G 5 EDO A 1 505 8 EDO EDO . H 5 EDO A 1 506 9 EDO EDO . I 6 FMT A 1 507 13 FMT FMT . J 6 FMT A 1 508 14 FMT FMT . K 5 EDO B 1 301 3 EDO EDO . L 5 EDO B 1 302 5 EDO EDO . M 5 EDO B 1 303 6 EDO EDO . N 5 EDO B 1 304 7 EDO EDO . O 5 EDO B 1 305 10 EDO EDO . P 6 FMT B 1 306 11 FMT FMT . Q 6 FMT B 1 307 12 FMT FMT . R 6 FMT B 1 308 15 FMT FMT . S 7 HOH A 1 601 1 HOH HOH . S 7 HOH A 2 602 2 HOH HOH . S 7 HOH A 3 603 7 HOH HOH . S 7 HOH A 4 604 8 HOH HOH . S 7 HOH A 5 605 9 HOH HOH . S 7 HOH A 6 606 10 HOH HOH . S 7 HOH A 7 607 11 HOH HOH . S 7 HOH A 8 608 13 HOH HOH . S 7 HOH A 9 609 14 HOH HOH . S 7 HOH A 10 610 15 HOH HOH . S 7 HOH A 11 611 16 HOH HOH . S 7 HOH A 12 612 17 HOH HOH . S 7 HOH A 13 613 19 HOH HOH . S 7 HOH A 14 614 20 HOH HOH . S 7 HOH A 15 615 21 HOH HOH . S 7 HOH A 16 616 22 HOH HOH . S 7 HOH A 17 617 23 HOH HOH . S 7 HOH A 18 618 24 HOH HOH . S 7 HOH A 19 619 25 HOH HOH . S 7 HOH A 20 620 26 HOH HOH . S 7 HOH A 21 621 27 HOH HOH . S 7 HOH A 22 622 28 HOH HOH . S 7 HOH A 23 623 35 HOH HOH . S 7 HOH A 24 624 36 HOH HOH . S 7 HOH A 25 625 37 HOH HOH . S 7 HOH A 26 626 38 HOH HOH . S 7 HOH A 27 627 39 HOH HOH . S 7 HOH A 28 628 40 HOH HOH . S 7 HOH A 29 629 41 HOH HOH . S 7 HOH A 30 630 42 HOH HOH . S 7 HOH A 31 631 43 HOH HOH . S 7 HOH A 32 632 44 HOH HOH . S 7 HOH A 33 633 45 HOH HOH . S 7 HOH A 34 634 46 HOH HOH . S 7 HOH A 35 635 47 HOH HOH . S 7 HOH A 36 636 48 HOH HOH . S 7 HOH A 37 637 49 HOH HOH . S 7 HOH A 38 638 50 HOH HOH . S 7 HOH A 39 639 51 HOH HOH . S 7 HOH A 40 640 52 HOH HOH . S 7 HOH A 41 641 53 HOH HOH . S 7 HOH A 42 642 54 HOH HOH . S 7 HOH A 43 643 55 HOH HOH . S 7 HOH A 44 644 56 HOH HOH . S 7 HOH A 45 645 57 HOH HOH . S 7 HOH A 46 646 58 HOH HOH . S 7 HOH A 47 647 59 HOH HOH . S 7 HOH A 48 648 67 HOH HOH . S 7 HOH A 49 649 68 HOH HOH . S 7 HOH A 50 650 79 HOH HOH . S 7 HOH A 51 651 80 HOH HOH . S 7 HOH A 52 652 81 HOH HOH . S 7 HOH A 53 653 82 HOH HOH . S 7 HOH A 54 654 83 HOH HOH . S 7 HOH A 55 655 85 HOH HOH . S 7 HOH A 56 656 86 HOH HOH . S 7 HOH A 57 657 87 HOH HOH . S 7 HOH A 58 658 88 HOH HOH . S 7 HOH A 59 659 89 HOH HOH . S 7 HOH A 60 660 90 HOH HOH . S 7 HOH A 61 661 91 HOH HOH . S 7 HOH A 62 662 92 HOH HOH . S 7 HOH A 63 663 99 HOH HOH . S 7 HOH A 64 664 100 HOH HOH . S 7 HOH A 65 665 101 HOH HOH . S 7 HOH A 66 666 102 HOH HOH . S 7 HOH A 67 667 103 HOH HOH . S 7 HOH A 68 668 104 HOH HOH . S 7 HOH A 69 669 105 HOH HOH . S 7 HOH A 70 670 111 HOH HOH . S 7 HOH A 71 671 112 HOH HOH . S 7 HOH A 72 672 113 HOH HOH . S 7 HOH A 73 673 117 HOH HOH . S 7 HOH A 74 674 120 HOH HOH . S 7 HOH A 75 675 121 HOH HOH . S 7 HOH A 76 676 122 HOH HOH . S 7 HOH A 77 677 124 HOH HOH . S 7 HOH A 78 678 125 HOH HOH . S 7 HOH A 79 679 126 HOH HOH . S 7 HOH A 80 680 127 HOH HOH . S 7 HOH A 81 681 128 HOH HOH . S 7 HOH A 82 682 129 HOH HOH . S 7 HOH A 83 683 130 HOH HOH . S 7 HOH A 84 684 131 HOH HOH . S 7 HOH A 85 685 132 HOH HOH . S 7 HOH A 86 686 137 HOH HOH . S 7 HOH A 87 687 138 HOH HOH . S 7 HOH A 88 688 140 HOH HOH . S 7 HOH A 89 689 141 HOH HOH . S 7 HOH A 90 690 143 HOH HOH . S 7 HOH A 91 691 144 HOH HOH . S 7 HOH A 92 692 145 HOH HOH . S 7 HOH A 93 693 147 HOH HOH . S 7 HOH A 94 694 148 HOH HOH . S 7 HOH A 95 695 149 HOH HOH . S 7 HOH A 96 696 150 HOH HOH . T 7 HOH B 1 401 3 HOH HOH . T 7 HOH B 2 402 4 HOH HOH . T 7 HOH B 3 403 5 HOH HOH . T 7 HOH B 4 404 6 HOH HOH . T 7 HOH B 5 405 12 HOH HOH . T 7 HOH B 6 406 18 HOH HOH . T 7 HOH B 7 407 29 HOH HOH . T 7 HOH B 8 408 30 HOH HOH . T 7 HOH B 9 409 31 HOH HOH . T 7 HOH B 10 410 32 HOH HOH . T 7 HOH B 11 411 33 HOH HOH . T 7 HOH B 12 412 34 HOH HOH . T 7 HOH B 13 413 60 HOH HOH . T 7 HOH B 14 414 61 HOH HOH . T 7 HOH B 15 415 62 HOH HOH . T 7 HOH B 16 416 63 HOH HOH . T 7 HOH B 17 417 64 HOH HOH . T 7 HOH B 18 418 65 HOH HOH . T 7 HOH B 19 419 66 HOH HOH . T 7 HOH B 20 420 69 HOH HOH . T 7 HOH B 21 421 70 HOH HOH . T 7 HOH B 22 422 71 HOH HOH . T 7 HOH B 23 423 72 HOH HOH . T 7 HOH B 24 424 73 HOH HOH . T 7 HOH B 25 425 74 HOH HOH . T 7 HOH B 26 426 75 HOH HOH . T 7 HOH B 27 427 76 HOH HOH . T 7 HOH B 28 428 77 HOH HOH . T 7 HOH B 29 429 78 HOH HOH . T 7 HOH B 30 430 84 HOH HOH . T 7 HOH B 31 431 93 HOH HOH . T 7 HOH B 32 432 94 HOH HOH . T 7 HOH B 33 433 95 HOH HOH . T 7 HOH B 34 434 96 HOH HOH . T 7 HOH B 35 435 97 HOH HOH . T 7 HOH B 36 436 98 HOH HOH . T 7 HOH B 37 437 106 HOH HOH . T 7 HOH B 38 438 107 HOH HOH . T 7 HOH B 39 439 108 HOH HOH . T 7 HOH B 40 440 109 HOH HOH . T 7 HOH B 41 441 110 HOH HOH . T 7 HOH B 42 442 114 HOH HOH . T 7 HOH B 43 443 115 HOH HOH . T 7 HOH B 44 444 116 HOH HOH . T 7 HOH B 45 445 118 HOH HOH . T 7 HOH B 46 446 119 HOH HOH . T 7 HOH B 47 447 123 HOH HOH . T 7 HOH B 48 448 133 HOH HOH . T 7 HOH B 49 449 134 HOH HOH . T 7 HOH B 50 450 135 HOH HOH . T 7 HOH B 51 451 136 HOH HOH . T 7 HOH B 52 452 139 HOH HOH . T 7 HOH B 53 453 142 HOH HOH . T 7 HOH B 54 454 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 5 35.754 76.938 149.302 1 63.57 ? C1 EDO 506 A 1 HETATM 2 O O1 EDO . . . H 5 34.465 76.556 148.787 1 62.96 ? O1 EDO 506 A 1 HETATM 3 C C2 EDO . . . H 5 36.863 76.032 148.738 1 63.49 ? C2 EDO 506 A 1 HETATM 4 O O2 EDO . . . H 5 37.782 75.472 149.697 1 57.78 ? O2 EDO 506 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #