data_4F6X # _model_server_result.job_id LwxNdIDwJlKV9BhvkGGVxQ _model_server_result.datetime_utc '2024-10-28 02:33:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f6x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4F6X # _exptl.entry_id 4F6X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D(-)-TARTARIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4F6X _cell.length_a 80.194 _cell.length_b 80.194 _cell.length_c 91.333 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F6X _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 177 A ASP 172 1_555 C MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 A OH TYR 253 A TYR 248 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc3 B OAC ZYL . A ZYL 301 1_555 D MG MG . A MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.818 ? metalc ? metalc4 B OAE ZYL . A ZYL 301 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc5 C MG MG . A MG 302 1_555 G O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc6 C MG MG . A MG 302 1_555 G O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc7 C MG MG . A MG 302 1_555 G O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc8 C MG MG . A MG 302 1_555 G O HOH . A HOH 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? metalc ? metalc9 D MG MG . A MG 303 1_555 G O HOH . A HOH 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc10 D MG MG . A MG 303 1_555 G O HOH . A HOH 573 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc11 E MG MG . A MG 304 1_555 F O1 TAR . A TAR 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc12 E MG MG . A MG 304 1_555 F O2 TAR . A TAR 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TAR _chem_comp.mon_nstd_flag . _chem_comp.name 'D(-)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TAR doub 290 n n O11 C1 TAR sing 291 n n O11 HO1 TAR sing 292 n n C1 C2 TAR sing 293 n n C2 O2 TAR sing 294 n n C2 C3 TAR sing 295 n n C2 H2 TAR sing 296 n n O2 HO2 TAR sing 297 n n C3 O3 TAR sing 298 n n C3 C4 TAR sing 299 n n C3 H3 TAR sing 300 n n O3 HO3 TAR sing 301 n n C4 O4 TAR doub 302 n n C4 O41 TAR sing 303 n n O41 HO4 TAR sing 304 n n # _atom_sites.entry_id 4F6X _atom_sites.fract_transf_matrix[1][1] 0.01247 _atom_sites.fract_transf_matrix[1][2] 0.007199 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014399 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZYL A 1 301 288 ZYL ZYL . C 3 MG A 1 302 289 MG MG . D 3 MG A 1 303 290 MG MG . E 3 MG A 1 304 291 MG MG . F 4 TAR A 1 305 292 TAR TAR . G 5 HOH A 1 401 293 HOH HOH . G 5 HOH A 2 402 294 HOH HOH . G 5 HOH A 3 403 295 HOH HOH . G 5 HOH A 4 404 296 HOH HOH . G 5 HOH A 5 405 297 HOH HOH . G 5 HOH A 6 406 298 HOH HOH . G 5 HOH A 7 407 299 HOH HOH . G 5 HOH A 8 408 300 HOH HOH . G 5 HOH A 9 409 301 HOH HOH . G 5 HOH A 10 410 302 HOH HOH . G 5 HOH A 11 411 303 HOH HOH . G 5 HOH A 12 412 304 HOH HOH . G 5 HOH A 13 413 305 HOH HOH . G 5 HOH A 14 414 306 HOH HOH . G 5 HOH A 15 415 307 HOH HOH . G 5 HOH A 16 416 308 HOH HOH . G 5 HOH A 17 417 309 HOH HOH . G 5 HOH A 18 418 310 HOH HOH . G 5 HOH A 19 419 311 HOH HOH . G 5 HOH A 20 420 312 HOH HOH . G 5 HOH A 21 421 313 HOH HOH . G 5 HOH A 22 422 314 HOH HOH . G 5 HOH A 23 423 315 HOH HOH . G 5 HOH A 24 424 316 HOH HOH . G 5 HOH A 25 425 317 HOH HOH . G 5 HOH A 26 426 318 HOH HOH . G 5 HOH A 27 427 319 HOH HOH . G 5 HOH A 28 428 320 HOH HOH . G 5 HOH A 29 429 321 HOH HOH . G 5 HOH A 30 430 322 HOH HOH . G 5 HOH A 31 431 323 HOH HOH . G 5 HOH A 32 432 324 HOH HOH . G 5 HOH A 33 433 325 HOH HOH . G 5 HOH A 34 434 326 HOH HOH . G 5 HOH A 35 435 327 HOH HOH . G 5 HOH A 36 436 328 HOH HOH . G 5 HOH A 37 437 329 HOH HOH . G 5 HOH A 38 438 330 HOH HOH . G 5 HOH A 39 439 331 HOH HOH . G 5 HOH A 40 440 332 HOH HOH . G 5 HOH A 41 441 333 HOH HOH . G 5 HOH A 42 442 334 HOH HOH . G 5 HOH A 43 443 335 HOH HOH . G 5 HOH A 44 444 336 HOH HOH . G 5 HOH A 45 445 337 HOH HOH . G 5 HOH A 46 446 338 HOH HOH . G 5 HOH A 47 447 339 HOH HOH . G 5 HOH A 48 448 340 HOH HOH . G 5 HOH A 49 449 341 HOH HOH . G 5 HOH A 50 450 342 HOH HOH . G 5 HOH A 51 451 343 HOH HOH . G 5 HOH A 52 452 344 HOH HOH . G 5 HOH A 53 453 345 HOH HOH . G 5 HOH A 54 454 346 HOH HOH . G 5 HOH A 55 455 347 HOH HOH . G 5 HOH A 56 456 348 HOH HOH . G 5 HOH A 57 457 349 HOH HOH . G 5 HOH A 58 458 350 HOH HOH . G 5 HOH A 59 459 351 HOH HOH . G 5 HOH A 60 460 352 HOH HOH . G 5 HOH A 61 461 353 HOH HOH . G 5 HOH A 62 462 354 HOH HOH . G 5 HOH A 63 463 355 HOH HOH . G 5 HOH A 64 464 356 HOH HOH . G 5 HOH A 65 465 357 HOH HOH . G 5 HOH A 66 466 358 HOH HOH . G 5 HOH A 67 467 359 HOH HOH . G 5 HOH A 68 468 360 HOH HOH . G 5 HOH A 69 469 361 HOH HOH . G 5 HOH A 70 470 362 HOH HOH . G 5 HOH A 71 471 363 HOH HOH . G 5 HOH A 72 472 364 HOH HOH . G 5 HOH A 73 473 365 HOH HOH . G 5 HOH A 74 474 366 HOH HOH . G 5 HOH A 75 475 367 HOH HOH . G 5 HOH A 76 476 368 HOH HOH . G 5 HOH A 77 477 369 HOH HOH . G 5 HOH A 78 478 370 HOH HOH . G 5 HOH A 79 479 371 HOH HOH . G 5 HOH A 80 480 372 HOH HOH . G 5 HOH A 81 481 373 HOH HOH . G 5 HOH A 82 482 374 HOH HOH . G 5 HOH A 83 483 375 HOH HOH . G 5 HOH A 84 484 376 HOH HOH . G 5 HOH A 85 485 377 HOH HOH . G 5 HOH A 86 486 378 HOH HOH . G 5 HOH A 87 487 379 HOH HOH . G 5 HOH A 88 488 380 HOH HOH . G 5 HOH A 89 489 381 HOH HOH . G 5 HOH A 90 490 382 HOH HOH . G 5 HOH A 91 491 383 HOH HOH . G 5 HOH A 92 492 384 HOH HOH . G 5 HOH A 93 493 385 HOH HOH . G 5 HOH A 94 494 386 HOH HOH . G 5 HOH A 95 495 387 HOH HOH . G 5 HOH A 96 496 388 HOH HOH . G 5 HOH A 97 497 389 HOH HOH . G 5 HOH A 98 498 390 HOH HOH . G 5 HOH A 99 499 391 HOH HOH . G 5 HOH A 100 500 392 HOH HOH . G 5 HOH A 101 501 393 HOH HOH . G 5 HOH A 102 502 394 HOH HOH . G 5 HOH A 103 503 395 HOH HOH . G 5 HOH A 104 504 396 HOH HOH . G 5 HOH A 105 505 397 HOH HOH . G 5 HOH A 106 506 398 HOH HOH . G 5 HOH A 107 507 399 HOH HOH . G 5 HOH A 108 508 400 HOH HOH . G 5 HOH A 109 509 401 HOH HOH . G 5 HOH A 110 510 402 HOH HOH . G 5 HOH A 111 511 403 HOH HOH . G 5 HOH A 112 512 404 HOH HOH . G 5 HOH A 113 513 405 HOH HOH . G 5 HOH A 114 514 406 HOH HOH . G 5 HOH A 115 515 407 HOH HOH . G 5 HOH A 116 516 408 HOH HOH . G 5 HOH A 117 517 409 HOH HOH . G 5 HOH A 118 518 410 HOH HOH . G 5 HOH A 119 519 411 HOH HOH . G 5 HOH A 120 520 412 HOH HOH . G 5 HOH A 121 521 413 HOH HOH . G 5 HOH A 122 522 414 HOH HOH . G 5 HOH A 123 523 415 HOH HOH . G 5 HOH A 124 524 416 HOH HOH . G 5 HOH A 125 525 417 HOH HOH . G 5 HOH A 126 526 418 HOH HOH . G 5 HOH A 127 527 419 HOH HOH . G 5 HOH A 128 528 421 HOH HOH . G 5 HOH A 129 529 422 HOH HOH . G 5 HOH A 130 530 423 HOH HOH . G 5 HOH A 131 531 424 HOH HOH . G 5 HOH A 132 532 425 HOH HOH . G 5 HOH A 133 533 426 HOH HOH . G 5 HOH A 134 534 427 HOH HOH . G 5 HOH A 135 535 428 HOH HOH . G 5 HOH A 136 536 429 HOH HOH . G 5 HOH A 137 537 430 HOH HOH . G 5 HOH A 138 538 431 HOH HOH . G 5 HOH A 139 539 432 HOH HOH . G 5 HOH A 140 540 433 HOH HOH . G 5 HOH A 141 541 434 HOH HOH . G 5 HOH A 142 542 435 HOH HOH . G 5 HOH A 143 543 436 HOH HOH . G 5 HOH A 144 544 437 HOH HOH . G 5 HOH A 145 545 438 HOH HOH . G 5 HOH A 146 546 439 HOH HOH . G 5 HOH A 147 547 440 HOH HOH . G 5 HOH A 148 548 441 HOH HOH . G 5 HOH A 149 549 442 HOH HOH . G 5 HOH A 150 550 443 HOH HOH . G 5 HOH A 151 551 444 HOH HOH . G 5 HOH A 152 552 445 HOH HOH . G 5 HOH A 153 553 446 HOH HOH . G 5 HOH A 154 554 447 HOH HOH . G 5 HOH A 155 555 448 HOH HOH . G 5 HOH A 156 556 449 HOH HOH . G 5 HOH A 157 557 450 HOH HOH . G 5 HOH A 158 558 451 HOH HOH . G 5 HOH A 159 559 452 HOH HOH . G 5 HOH A 160 560 453 HOH HOH . G 5 HOH A 161 561 454 HOH HOH . G 5 HOH A 162 562 455 HOH HOH . G 5 HOH A 163 563 456 HOH HOH . G 5 HOH A 164 564 457 HOH HOH . G 5 HOH A 165 565 458 HOH HOH . G 5 HOH A 166 566 459 HOH HOH . G 5 HOH A 167 567 460 HOH HOH . G 5 HOH A 168 568 461 HOH HOH . G 5 HOH A 169 569 462 HOH HOH . G 5 HOH A 170 570 463 HOH HOH . G 5 HOH A 171 571 464 HOH HOH . G 5 HOH A 172 572 465 HOH HOH . G 5 HOH A 173 573 466 HOH HOH . G 5 HOH A 174 574 467 HOH HOH . G 5 HOH A 175 575 468 HOH HOH . G 5 HOH A 176 576 469 HOH HOH . G 5 HOH A 177 577 470 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TAR . . . F 4 -18.963 8.313 11.664 1 40.86 ? O1 TAR 305 A 1 HETATM 2 O O11 TAR . . . F 4 -17.261 7.429 12.712 1 41.72 ? O11 TAR 305 A 1 HETATM 3 C C1 TAR . . . F 4 -18.369 7.294 12.116 1 43.69 ? C1 TAR 305 A 1 HETATM 4 C C2 TAR . . . F 4 -19.001 5.942 11.952 1 47.83 ? C2 TAR 305 A 1 HETATM 5 O O2 TAR . . . F 4 -18.875 5.497 10.661 1 46.38 ? O2 TAR 305 A 1 HETATM 6 C C3 TAR . . . F 4 -18.422 4.936 12.893 1 48.01 ? C3 TAR 305 A 1 HETATM 7 O O3 TAR . . . F 4 -18.742 3.659 12.475 1 49.42 ? O3 TAR 305 A 1 HETATM 8 C C4 TAR . . . F 4 -19.075 5.195 14.201 1 46.67 ? C4 TAR 305 A 1 HETATM 9 O O4 TAR . . . F 4 -19.774 6.227 14.302 1 42.83 ? O4 TAR 305 A 1 HETATM 10 O O41 TAR . . . F 4 -18.961 4.408 15.183 1 58.91 ? O41 TAR 305 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #