data_4F7O # _model_server_result.job_id xbfDkYQr0-yntg0Kcv3NOA _model_server_result.datetime_utc '2025-03-20 07:58:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f7o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4F7O # _exptl.entry_id 4F7O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.082 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'THIOCYANATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.27 _cell.angle_gamma 90 _cell.entry_id 4F7O _cell.length_a 161.734 _cell.length_b 46.505 _cell.length_c 71.261 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F7O _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 136.324176 0 140.238587 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 7 A GLY 7 1_555 A N MSE 8 A MSE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 8 A MSE 8 1_555 A N ALA 9 A ALA 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C ASN 18 A ASN 18 1_555 A N MSE 19 A MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C MSE 19 A MSE 19 1_555 A N GLN 20 A GLN 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C LYS 64 A LYS 64 1_555 A N MSE 65 A MSE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 A C MSE 65 A MSE 65 1_555 A N VAL 66 A VAL 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A C VAL 66 A VAL 66 1_555 A N MSE 67 A MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 A C MSE 67 A MSE 67 1_555 A N HIS 68 A HIS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C VAL 77 A VAL 77 1_555 A N MSE 78 A MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 A C MSE 78 A MSE 78 1_555 A N GLY 79 A GLY 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale11 A C LEU 80 A LEU 80 1_555 A N MSE 81 A MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale12 A C MSE 81 A MSE 81 1_555 A N LEU 82 A LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale13 A C THR 89 A THR 89 1_555 A N MSE 90 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale14 A C MSE 90 A MSE 90 1_555 A N ILE 91 A ILE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale15 A C ILE 92 A ILE 92 1_555 A N MSE 93 A MSE 93 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.326 ? covale ? covale16 A C ILE 92 A ILE 92 1_555 A N MSE 93 A MSE 93 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale17 A C MSE 93 A MSE 93 1_555 A N ASP 94 A ASP 94 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale18 A C MSE 93 A MSE 93 1_555 A N ASP 94 A ASP 94 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale19 A C TYR 116 A TYR 116 1_555 A N MSE 117 A MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale20 A C MSE 117 A MSE 117 1_555 A N ALA 118 A ALA 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale21 A C GLN 155 A GLN 155 1_555 A N MSE 156 A MSE 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale22 A C MSE 156 A MSE 156 1_555 A N LEU 157 A LEU 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale23 B C GLY 7 B GLY 7 1_555 B N MSE 8 B MSE 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale24 B C MSE 8 B MSE 8 1_555 B N ALA 9 B ALA 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale25 B C ASN 18 B ASN 18 1_555 B N MSE 19 B MSE 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale26 B C MSE 19 B MSE 19 1_555 B N GLN 20 B GLN 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale27 B C LYS 64 B LYS 64 1_555 B N MSE 65 B MSE 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale28 B C MSE 65 B MSE 65 1_555 B N VAL 66 B VAL 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale29 B C VAL 66 B VAL 66 1_555 B N MSE 67 B MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale30 B C MSE 67 B MSE 67 1_555 B N HIS 68 B HIS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale31 B C VAL 77 B VAL 77 1_555 B N MSE 78 B MSE 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale32 B C MSE 78 B MSE 78 1_555 B N GLY 79 B GLY 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale33 B C LEU 80 B LEU 80 1_555 B N MSE 81 B MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale34 B C MSE 81 B MSE 81 1_555 B N LEU 82 B LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale35 B C THR 89 B THR 89 1_555 B N MSE 90 B MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale36 B C MSE 90 B MSE 90 1_555 B N ILE 91 B ILE 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale37 B C ILE 92 B ILE 92 1_555 B N MSE 93 B MSE 93 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.327 ? covale ? covale38 B C ILE 92 B ILE 92 1_555 B N MSE 93 B MSE 93 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.329 ? covale ? covale39 B C MSE 93 B MSE 93 1_555 B N ASP 94 B ASP 94 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale40 B C MSE 93 B MSE 93 1_555 B N ASP 94 B ASP 94 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale41 B C TYR 116 B TYR 116 1_555 B N MSE 117 B MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale42 B C MSE 117 B MSE 117 1_555 B N ALA 118 B ALA 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale43 B C GLN 155 B GLN 155 1_555 B N MSE 156 B MSE 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale44 B C MSE 156 B MSE 156 1_555 B N LEU 157 B LEU 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A NE2 HIS 138 A HIS 138 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc2 A NE2 HIS 140 A HIS 140 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc3 A OD2 ASP 151 A ASP 151 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc4 A OD1 ASP 151 A ASP 151 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc5 C ZN ZN . A ZN 301 1_555 H O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc6 B NE2 HIS 138 B HIS 138 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc7 B NE2 HIS 140 B HIS 140 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc8 B OD2 ASP 151 B ASP 151 1_555 F ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc9 F ZN ZN . B ZN 301 1_555 I O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? # _chem_comp.formula 'C N S -1' _chem_comp.formula_weight 58.082 _chem_comp.id SCN _chem_comp.mon_nstd_flag . _chem_comp.name 'THIOCYANATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S C SCN sing 277 n n C N SCN trip 278 n n # _atom_sites.entry_id 4F7O _atom_sites.fract_transf_matrix[1][1] 0.006183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 260 ZN ZN . D 3 SCN A 1 302 1 SCN SCN . E 3 SCN A 1 303 1 SCN SCN . F 2 ZN B 1 301 260 ZN ZN . G 3 SCN B 1 302 1 SCN SCN . H 4 HOH A 1 401 1 HOH HOH . H 4 HOH A 2 402 4 HOH HOH . H 4 HOH A 3 403 5 HOH HOH . H 4 HOH A 4 404 6 HOH HOH . H 4 HOH A 5 405 8 HOH HOH . H 4 HOH A 6 406 9 HOH HOH . H 4 HOH A 7 407 10 HOH HOH . H 4 HOH A 8 408 13 HOH HOH . H 4 HOH A 9 409 18 HOH HOH . H 4 HOH A 10 410 19 HOH HOH . H 4 HOH A 11 411 21 HOH HOH . H 4 HOH A 12 412 22 HOH HOH . H 4 HOH A 13 413 23 HOH HOH . H 4 HOH A 14 414 24 HOH HOH . H 4 HOH A 15 415 28 HOH HOH . H 4 HOH A 16 416 29 HOH HOH . H 4 HOH A 17 417 31 HOH HOH . H 4 HOH A 18 418 33 HOH HOH . H 4 HOH A 19 419 36 HOH HOH . H 4 HOH A 20 420 37 HOH HOH . H 4 HOH A 21 421 38 HOH HOH . H 4 HOH A 22 422 41 HOH HOH . H 4 HOH A 23 423 42 HOH HOH . H 4 HOH A 24 424 43 HOH HOH . H 4 HOH A 25 425 45 HOH HOH . H 4 HOH A 26 426 46 HOH HOH . H 4 HOH A 27 427 47 HOH HOH . H 4 HOH A 28 428 49 HOH HOH . H 4 HOH A 29 429 51 HOH HOH . H 4 HOH A 30 430 52 HOH HOH . I 4 HOH B 1 401 2 HOH HOH . I 4 HOH B 2 402 3 HOH HOH . I 4 HOH B 3 403 7 HOH HOH . I 4 HOH B 4 404 11 HOH HOH . I 4 HOH B 5 405 12 HOH HOH . I 4 HOH B 6 406 14 HOH HOH . I 4 HOH B 7 407 15 HOH HOH . I 4 HOH B 8 408 16 HOH HOH . I 4 HOH B 9 409 17 HOH HOH . I 4 HOH B 10 410 20 HOH HOH . I 4 HOH B 11 411 25 HOH HOH . I 4 HOH B 12 412 26 HOH HOH . I 4 HOH B 13 413 27 HOH HOH . I 4 HOH B 14 414 30 HOH HOH . I 4 HOH B 15 415 32 HOH HOH . I 4 HOH B 16 416 34 HOH HOH . I 4 HOH B 17 417 35 HOH HOH . I 4 HOH B 18 418 39 HOH HOH . I 4 HOH B 19 419 40 HOH HOH . I 4 HOH B 20 420 44 HOH HOH . I 4 HOH B 21 421 48 HOH HOH . I 4 HOH B 22 422 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SCN . . . D 3 47.547 2.117 62.406 1 65.23 ? S SCN 302 A 1 HETATM 2 C C SCN . . . D 3 47.128 0.697 63.434 1 55.92 ? C SCN 302 A 1 HETATM 3 N N SCN . . . D 3 46.884 -0.242 64.111 1 54.56 ? N SCN 302 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 3 #