data_4F8D # _model_server_result.job_id '_MQhRSqbo2PrmL8WzI7Otw' _model_server_result.datetime_utc '2024-11-26 05:51:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f8d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4F8D # _exptl.entry_id 4F8D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.6 _cell.angle_gamma 90 _cell.entry_id 4F8D _cell.length_a 46.4 _cell.length_b 51 _cell.length_c 74.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F8D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 B,E,F,G,H,J 2 1 A,C,D,I 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 x-1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 -23.2 25.5 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 42 A SER 39 1_555 D NA NA . A NA 102 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.792 ? metalc ? metalc2 D NA NA . A NA 102 1_555 I O HOH . A HOH 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc3 D NA NA . A NA 102 1_555 B OE1 GLU 28 B GLU 25 1_555 ? ? ? ? B ? ? ? ? ? ? ? 3.06 ? metalc ? metalc4 D NA NA . A NA 102 1_555 J O HOH . B HOH 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? metalc ? metalc5 B OH TYR 40 B TYR 37 1_555 H NA NA . B NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc6 B OG1 THR 52 B THR 49 1_555 H NA NA . B NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.062 ? metalc ? metalc7 B OG SER 55 B SER 52 1_555 H NA NA . B NA 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc8 H NA NA . B NA 104 1_555 J O HOH . B HOH 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc9 H NA NA . B NA 104 1_555 J O HOH . B HOH 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 260 n n S O2 SO4 doub 261 n n S O3 SO4 sing 262 n n S O4 SO4 sing 263 n n # _atom_sites.entry_id 4F8D _atom_sites.fract_transf_matrix[1][1] 0.021552 _atom_sites.fract_transf_matrix[1][2] -0.000038 _atom_sites.fract_transf_matrix[1][3] 0.002494 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019608 _atom_sites.fract_transf_matrix[2][3] -0.000004 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 101 4 SO4 SO4 . D 3 NA A 1 102 2 NA NA . E 2 SO4 B 1 101 2 SO4 SO4 . F 2 SO4 B 1 102 3 SO4 SO4 . G 2 SO4 B 1 103 5 SO4 SO4 . H 3 NA B 1 104 1 NA NA . I 4 HOH A 1 201 3 HOH HOH . I 4 HOH A 2 202 4 HOH HOH . I 4 HOH A 3 203 5 HOH HOH . I 4 HOH A 4 204 13 HOH HOH . I 4 HOH A 5 205 16 HOH HOH . I 4 HOH A 6 206 17 HOH HOH . I 4 HOH A 7 207 19 HOH HOH . I 4 HOH A 8 208 20 HOH HOH . I 4 HOH A 9 209 22 HOH HOH . I 4 HOH A 10 210 23 HOH HOH . I 4 HOH A 11 211 24 HOH HOH . I 4 HOH A 12 212 25 HOH HOH . I 4 HOH A 13 213 26 HOH HOH . I 4 HOH A 14 214 27 HOH HOH . I 4 HOH A 15 215 28 HOH HOH . I 4 HOH A 16 216 31 HOH HOH . I 4 HOH A 17 217 34 HOH HOH . I 4 HOH A 18 218 37 HOH HOH . I 4 HOH A 19 219 38 HOH HOH . I 4 HOH A 20 220 43 HOH HOH . I 4 HOH A 21 221 46 HOH HOH . I 4 HOH A 22 222 47 HOH HOH . I 4 HOH A 23 223 49 HOH HOH . I 4 HOH A 24 224 52 HOH HOH . I 4 HOH A 25 225 53 HOH HOH . I 4 HOH A 26 226 54 HOH HOH . I 4 HOH A 27 227 55 HOH HOH . I 4 HOH A 28 228 56 HOH HOH . I 4 HOH A 29 229 61 HOH HOH . I 4 HOH A 30 230 62 HOH HOH . I 4 HOH A 31 231 63 HOH HOH . I 4 HOH A 32 232 65 HOH HOH . I 4 HOH A 33 233 66 HOH HOH . I 4 HOH A 34 234 69 HOH HOH . I 4 HOH A 35 235 70 HOH HOH . I 4 HOH A 36 236 73 HOH HOH . I 4 HOH A 37 237 75 HOH HOH . I 4 HOH A 38 238 76 HOH HOH . I 4 HOH A 39 239 77 HOH HOH . I 4 HOH A 40 240 79 HOH HOH . I 4 HOH A 41 241 82 HOH HOH . I 4 HOH A 42 242 83 HOH HOH . I 4 HOH A 43 243 84 HOH HOH . I 4 HOH A 44 244 89 HOH HOH . I 4 HOH A 45 245 92 HOH HOH . I 4 HOH A 46 246 95 HOH HOH . I 4 HOH A 47 247 96 HOH HOH . I 4 HOH A 48 248 97 HOH HOH . I 4 HOH A 49 249 98 HOH HOH . I 4 HOH A 50 250 103 HOH HOH . I 4 HOH A 51 251 104 HOH HOH . I 4 HOH A 52 252 112 HOH HOH . I 4 HOH A 53 253 116 HOH HOH . I 4 HOH A 54 254 117 HOH HOH . I 4 HOH A 55 255 119 HOH HOH . I 4 HOH A 56 256 122 HOH HOH . I 4 HOH A 57 257 123 HOH HOH . I 4 HOH A 58 258 125 HOH HOH . I 4 HOH A 59 259 126 HOH HOH . J 4 HOH B 1 201 1 HOH HOH . J 4 HOH B 2 202 2 HOH HOH . J 4 HOH B 3 203 6 HOH HOH . J 4 HOH B 4 204 7 HOH HOH . J 4 HOH B 5 205 8 HOH HOH . J 4 HOH B 6 206 9 HOH HOH . J 4 HOH B 7 207 10 HOH HOH . J 4 HOH B 8 208 11 HOH HOH . J 4 HOH B 9 209 12 HOH HOH . J 4 HOH B 10 210 14 HOH HOH . J 4 HOH B 11 211 15 HOH HOH . J 4 HOH B 12 212 18 HOH HOH . J 4 HOH B 13 213 21 HOH HOH . J 4 HOH B 14 214 29 HOH HOH . J 4 HOH B 15 215 30 HOH HOH . J 4 HOH B 16 216 32 HOH HOH . J 4 HOH B 17 217 33 HOH HOH . J 4 HOH B 18 218 35 HOH HOH . J 4 HOH B 19 219 36 HOH HOH . J 4 HOH B 20 220 39 HOH HOH . J 4 HOH B 21 221 40 HOH HOH . J 4 HOH B 22 222 41 HOH HOH . J 4 HOH B 23 223 42 HOH HOH . J 4 HOH B 24 224 44 HOH HOH . J 4 HOH B 25 225 45 HOH HOH . J 4 HOH B 26 226 48 HOH HOH . J 4 HOH B 27 227 50 HOH HOH . J 4 HOH B 28 228 51 HOH HOH . J 4 HOH B 29 229 57 HOH HOH . J 4 HOH B 30 230 58 HOH HOH . J 4 HOH B 31 231 59 HOH HOH . J 4 HOH B 32 232 60 HOH HOH . J 4 HOH B 33 233 64 HOH HOH . J 4 HOH B 34 234 67 HOH HOH . J 4 HOH B 35 235 68 HOH HOH . J 4 HOH B 36 236 71 HOH HOH . J 4 HOH B 37 237 72 HOH HOH . J 4 HOH B 38 238 74 HOH HOH . J 4 HOH B 39 239 78 HOH HOH . J 4 HOH B 40 240 80 HOH HOH . J 4 HOH B 41 241 81 HOH HOH . J 4 HOH B 42 242 85 HOH HOH . J 4 HOH B 43 243 86 HOH HOH . J 4 HOH B 44 244 87 HOH HOH . J 4 HOH B 45 245 88 HOH HOH . J 4 HOH B 46 246 90 HOH HOH . J 4 HOH B 47 247 91 HOH HOH . J 4 HOH B 48 248 93 HOH HOH . J 4 HOH B 49 249 94 HOH HOH . J 4 HOH B 50 250 102 HOH HOH . J 4 HOH B 51 251 105 HOH HOH . J 4 HOH B 52 252 106 HOH HOH . J 4 HOH B 53 253 108 HOH HOH . J 4 HOH B 54 254 109 HOH HOH . J 4 HOH B 55 255 110 HOH HOH . J 4 HOH B 56 256 111 HOH HOH . J 4 HOH B 57 257 114 HOH HOH . J 4 HOH B 58 258 115 HOH HOH . J 4 HOH B 59 259 118 HOH HOH . J 4 HOH B 60 260 120 HOH HOH . J 4 HOH B 61 261 121 HOH HOH . J 4 HOH B 62 262 124 HOH HOH . J 4 HOH B 63 263 127 HOH HOH . J 4 HOH B 64 264 129 HOH HOH . J 4 HOH B 65 265 130 HOH HOH . J 4 HOH B 66 266 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 2 -4.217 -12.345 -20.145 0.75 35.23 ? S SO4 101 A 1 HETATM 2 O O1 SO4 . . . C 2 -3.114 -12.962 -20.912 0.75 33.7 ? O1 SO4 101 A 1 HETATM 3 O O2 SO4 . . . C 2 -5.178 -11.662 -21.154 0.75 31.52 ? O2 SO4 101 A 1 HETATM 4 O O3 SO4 . . . C 2 -4.941 -13.488 -19.461 0.75 43.56 ? O3 SO4 101 A 1 HETATM 5 O O4 SO4 . . . C 2 -3.693 -11.297 -19.23 0.75 32.88 ? O4 SO4 101 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #