data_4F8H
#
_model_server_result.job_id            R1l8IOvoJAFZJVAE6DQx9Q 
_model_server_result.datetime_utc      '2024-11-04 22:41:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4f8h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":401}' 
#
_entry.id    4F8H 
#
_exptl.entry_id    4F8H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              237.725 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (R)-ketamine 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.61 
_cell.angle_gamma         90 
_cell.entry_id            4F8H 
_cell.length_a            184.069 
_cell.length_b            132.742 
_cell.length_c            162.077 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4F8H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 J N N 
? 2 N N N 
? 2 S N N 
? 2 W N N 
#
_chem_comp.formula           'C13 H16 Cl N O' 
_chem_comp.formula_weight    237.725 
_chem_comp.id                RKE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (R)-ketamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (2R)-2-(2-chlorophenyl)-2-(methylamino)cyclohexanone 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAB RKE doub 506 n y 
CAA CAC RKE sing 507 n y 
CAB CAD RKE sing 508 n y 
CAC CAE RKE doub 509 n y 
CAD CAF RKE doub 510 n y 
CAE CAF RKE sing 511 n y 
CAE CAL RKE sing 512 n n 
CAF CLAP RKE sing 513 n n 
CAG CAH RKE sing 514 n n 
CAG CAL RKE sing 515 n n 
CAG OAO RKE doub 516 n n 
CAH CAI RKE sing 517 n n 
CAI CAJ RKE sing 518 n n 
CAJ CAK RKE sing 519 n n 
CAK CAL RKE sing 520 n n 
CAL NAN RKE sing 521 n n 
CAM NAN RKE sing 522 n n 
CAA HAA RKE sing 523 n n 
CAB HAB RKE sing 524 n n 
CAC HAC RKE sing 525 n n 
CAD HAD RKE sing 526 n n 
CAH HAH RKE sing 527 n n 
CAH HAHA RKE sing 528 n n 
CAI HAI RKE sing 529 n n 
CAI HAIA RKE sing 530 n n 
CAJ HAJ RKE sing 531 n n 
CAJ HAJA RKE sing 532 n n 
CAK HAK RKE sing 533 n n 
CAK HAKA RKE sing 534 n n 
CAM HAM RKE sing 535 n n 
CAM HAMA RKE sing 536 n n 
CAM HAMB RKE sing 537 n n 
NAN HNAN RKE sing 538 n n 
#
_atom_sites.entry_id                     4F8H 
_atom_sites.fract_transf_matrix[1][1]    0.005433 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001315 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007533 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006348 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 RKE A 1 401 401 RKE KTM . 
G 3 LMD A 1 402 501 LMD LMD . 
H 4 PC1 A 1 403 601 PC1 PC1 . 
I 4 PC1 A 1 404 602 PC1 PC1 . 
J 2 RKE B 1 401 401 RKE KTM . 
K 3 LMD B 1 402 501 LMD LMD . 
L 4 PC1 B 1 403 601 PC1 PC1 . 
M 4 PC1 B 1 404 602 PC1 PC1 . 
N 2 RKE C 1 401 401 RKE KTM . 
O 3 LMD C 1 402 501 LMD LMD . 
P 4 PC1 C 1 403 601 PC1 PC1 . 
Q 4 PC1 C 1 404 602 PC1 PC1 . 
R 3 LMD C 1 405 502 LMD LMD . 
S 2 RKE D 1 401 401 RKE KTM . 
T 3 LMD D 1 402 501 LMD LMD . 
U 4 PC1 D 1 403 601 PC1 PC1 . 
V 4 PC1 D 1 404 602 PC1 PC1 . 
W 2 RKE E 1 401 401 RKE KTM . 
X 3 LMD E 1 402 501 LMD LMD . 
Y 4 PC1 E 1 403 601 PC1 PC1 . 
Z 4 PC1 E 1 404 602 PC1 PC1 . 
AA 5 HOH A 1 501 2 HOH HOH . 
AA 5 HOH A 2 502 13 HOH HOH . 
AA 5 HOH A 3 503 14 HOH HOH . 
AA 5 HOH A 4 504 20 HOH HOH . 
AA 5 HOH A 5 505 35 HOH HOH . 
AA 5 HOH A 6 506 40 HOH HOH . 
AA 5 HOH A 7 507 41 HOH HOH . 
AA 5 HOH A 8 508 45 HOH HOH . 
AA 5 HOH A 9 509 48 HOH HOH . 
AA 5 HOH A 10 510 54 HOH HOH . 
BA 5 HOH B 1 501 9 HOH HOH . 
BA 5 HOH B 2 502 17 HOH HOH . 
BA 5 HOH B 3 503 22 HOH HOH . 
BA 5 HOH B 4 504 27 HOH HOH . 
BA 5 HOH B 5 505 29 HOH HOH . 
BA 5 HOH B 6 506 32 HOH HOH . 
BA 5 HOH B 7 507 36 HOH HOH . 
BA 5 HOH B 8 508 37 HOH HOH . 
BA 5 HOH B 9 509 47 HOH HOH . 
BA 5 HOH B 10 510 52 HOH HOH . 
BA 5 HOH B 11 511 55 HOH HOH . 
BA 5 HOH B 12 512 57 HOH HOH . 
BA 5 HOH B 13 513 58 HOH HOH . 
CA 5 HOH C 1 501 1 HOH HOH . 
CA 5 HOH C 2 502 4 HOH HOH . 
CA 5 HOH C 3 503 5 HOH HOH . 
CA 5 HOH C 4 504 10 HOH HOH . 
CA 5 HOH C 5 505 11 HOH HOH . 
CA 5 HOH C 6 506 16 HOH HOH . 
CA 5 HOH C 7 507 28 HOH HOH . 
CA 5 HOH C 8 508 31 HOH HOH . 
CA 5 HOH C 9 509 38 HOH HOH . 
CA 5 HOH C 10 510 39 HOH HOH . 
CA 5 HOH C 11 511 46 HOH HOH . 
CA 5 HOH C 12 512 50 HOH HOH . 
CA 5 HOH C 13 513 56 HOH HOH . 
DA 5 HOH D 1 501 3 HOH HOH . 
DA 5 HOH D 2 502 8 HOH HOH . 
DA 5 HOH D 3 503 12 HOH HOH . 
DA 5 HOH D 4 504 21 HOH HOH . 
DA 5 HOH D 5 505 23 HOH HOH . 
DA 5 HOH D 6 506 26 HOH HOH . 
DA 5 HOH D 7 507 43 HOH HOH . 
DA 5 HOH D 8 508 44 HOH HOH . 
DA 5 HOH D 9 509 49 HOH HOH . 
DA 5 HOH D 10 510 51 HOH HOH . 
EA 5 HOH E 1 501 6 HOH HOH . 
EA 5 HOH E 2 502 7 HOH HOH . 
EA 5 HOH E 3 503 15 HOH HOH . 
EA 5 HOH E 4 504 18 HOH HOH . 
EA 5 HOH E 5 505 19 HOH HOH . 
EA 5 HOH E 6 506 24 HOH HOH . 
EA 5 HOH E 7 507 25 HOH HOH . 
EA 5 HOH E 8 508 30 HOH HOH . 
EA 5 HOH E 9 509 33 HOH HOH . 
EA 5 HOH E 10 510 34 HOH HOH . 
EA 5 HOH E 11 511 42 HOH HOH . 
EA 5 HOH E 12 512 53 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA RKE . . . W 2 44.93 -1.681 9.705 0.8 92.08 ? CAA RKE 401 E 1 
HETATM 2 C CAB RKE . . . W 2 43.892 -2.461 10.158 0.8 42.13 ? CAB RKE 401 E 1 
HETATM 3 C CAC RKE . . . W 2 45.324 -0.542 10.397 0.8 89.55 ? CAC RKE 401 E 1 
HETATM 4 C CAD RKE . . . W 2 43.249 -2.083 11.32 0.8 67.29 ? CAD RKE 401 E 1 
HETATM 5 C CAE RKE . . . W 2 44.677 -0.14 11.573 0.8 155.13 ? CAE RKE 401 E 1 
HETATM 6 C CAF RKE . . . W 2 43.624 -0.952 12.029 0.8 148.01 ? CAF RKE 401 E 1 
HETATM 7 C CAG RKE . . . W 2 45.938 2.097 11.349 0.8 128.25 ? CAG RKE 401 E 1 
HETATM 8 C CAH RKE . . . W 2 45.065 3.069 10.597 0.8 118.89 ? CAH RKE 401 E 1 
HETATM 9 C CAI RKE . . . W 2 44.3 3.965 11.607 0.8 84.08 ? CAI RKE 401 E 1 
HETATM 10 C CAJ RKE . . . W 2 43.326 3.054 12.377 0.8 102.85 ? CAJ RKE 401 E 1 
HETATM 11 C CAK RKE . . . W 2 44.097 1.947 13.145 0.8 128.44 ? CAK RKE 401 E 1 
HETATM 12 C CAL RKE . . . W 2 45.182 1.149 12.312 0.8 164.68 ? CAL RKE 401 E 1 
HETATM 13 C CAM RKE . . . W 2 46.666 1.667 14.273 0.8 121.59 ? CAM RKE 401 E 1 
HETATM 14 N NAN RKE . . . W 2 46.159 0.722 13.291 0.8 156.16 ? NAN RKE 401 E 1 
HETATM 15 O OAO RKE . . . W 2 47.142 2.08 11.22 0.8 108.68 ? OAO RKE 401 E 1 
HETATM 16 CL CLAP RKE . . . W 2 42.7 -0.575 13.558 0.8 200.49 ? CLAP RKE 401 E 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           16 
#