data_4F8P # _model_server_result.job_id 6afIzlfZZjToeX_qXpGsVw _model_server_result.datetime_utc '2025-01-25 11:58:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f8p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":201}' # _entry.id 4F8P # _exptl.entry_id 4F8P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-galactopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4F8P _cell.length_a 59.266 _cell.length_b 59.266 _cell.length_c 200.088 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F8P _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,K 1 1 B,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GAL _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-galactopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-galactose;D-galactose;galactose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GAL sing 76 n n C1 O1 GAL sing 77 n n C1 O5 GAL sing 78 n n C1 H1 GAL sing 79 n n C2 C3 GAL sing 80 n n C2 O2 GAL sing 81 n n C2 H2 GAL sing 82 n n C3 C4 GAL sing 83 n n C3 O3 GAL sing 84 n n C3 H3 GAL sing 85 n n C4 C5 GAL sing 86 n n C4 O4 GAL sing 87 n n C4 H4 GAL sing 88 n n C5 C6 GAL sing 89 n n C5 O5 GAL sing 90 n n C5 H5 GAL sing 91 n n C6 O6 GAL sing 92 n n C6 H61 GAL sing 93 n n C6 H62 GAL sing 94 n n O1 HO1 GAL sing 95 n n O2 HO2 GAL sing 96 n n O3 HO3 GAL sing 97 n n O4 HO4 GAL sing 98 n n O6 HO6 GAL sing 99 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GAL DGalpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GAL b-D-galactopyranose 'COMMON NAME' GMML 1 GAL b-D-Galp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GAL Gal 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4F8P _atom_sites.fract_transf_matrix[1][1] 0.016873 _atom_sites.fract_transf_matrix[1][2] 0.009742 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004998 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GAL A 1 201 1 GAL GAL . D 3 ACT A 1 202 1 ACT ACT . E 4 TBF A 1 203 1 TBF TBF . F 3 ACT A 1 204 1 ACT ACT . G 3 ACT A 1 205 1 ACT ACT . H 2 GAL B 1 201 1 GAL GAL . I 3 ACT B 1 202 1 ACT ACT . J 3 ACT B 1 203 1 ACT ACT . K 5 HOH A 1 301 2 HOH HOH . K 5 HOH A 2 302 3 HOH HOH . K 5 HOH A 3 303 7 HOH HOH . K 5 HOH A 4 304 8 HOH HOH . K 5 HOH A 5 305 9 HOH HOH . K 5 HOH A 6 306 10 HOH HOH . K 5 HOH A 7 307 11 HOH HOH . K 5 HOH A 8 308 15 HOH HOH . K 5 HOH A 9 309 17 HOH HOH . K 5 HOH A 10 310 18 HOH HOH . K 5 HOH A 11 311 20 HOH HOH . K 5 HOH A 12 312 22 HOH HOH . K 5 HOH A 13 313 23 HOH HOH . K 5 HOH A 14 314 24 HOH HOH . K 5 HOH A 15 315 26 HOH HOH . K 5 HOH A 16 316 27 HOH HOH . K 5 HOH A 17 317 34 HOH HOH . K 5 HOH A 18 318 43 HOH HOH . K 5 HOH A 19 319 44 HOH HOH . K 5 HOH A 20 320 48 HOH HOH . K 5 HOH A 21 321 50 HOH HOH . K 5 HOH A 22 322 55 HOH HOH . K 5 HOH A 23 323 58 HOH HOH . K 5 HOH A 24 324 63 HOH HOH . L 5 HOH B 1 301 4 HOH HOH . L 5 HOH B 2 302 5 HOH HOH . L 5 HOH B 3 303 12 HOH HOH . L 5 HOH B 4 304 13 HOH HOH . L 5 HOH B 5 305 14 HOH HOH . L 5 HOH B 6 306 19 HOH HOH . L 5 HOH B 7 307 21 HOH HOH . L 5 HOH B 8 308 25 HOH HOH . L 5 HOH B 9 309 30 HOH HOH . L 5 HOH B 10 310 31 HOH HOH . L 5 HOH B 11 311 32 HOH HOH . L 5 HOH B 12 312 33 HOH HOH . L 5 HOH B 13 313 35 HOH HOH . L 5 HOH B 14 314 42 HOH HOH . L 5 HOH B 15 315 45 HOH HOH . L 5 HOH B 16 316 46 HOH HOH . L 5 HOH B 17 317 49 HOH HOH . L 5 HOH B 18 318 51 HOH HOH . L 5 HOH B 19 319 54 HOH HOH . L 5 HOH B 20 320 56 HOH HOH . L 5 HOH B 21 321 57 HOH HOH . L 5 HOH B 22 322 59 HOH HOH . L 5 HOH B 23 323 60 HOH HOH . L 5 HOH B 24 324 61 HOH HOH . L 5 HOH B 25 325 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GAL . . . H 2 11.598 -15.855 -37.311 1 45.49 ? C1 GAL 201 B 1 HETATM 2 C C2 GAL . . . H 2 11.662 -17.055 -36.37 1 44.79 ? C2 GAL 201 B 1 HETATM 3 C C3 GAL . . . H 2 12.719 -16.908 -35.306 1 41.72 ? C3 GAL 201 B 1 HETATM 4 C C4 GAL . . . H 2 14.097 -16.584 -35.904 1 43.55 ? C4 GAL 201 B 1 HETATM 5 C C5 GAL . . . H 2 13.896 -15.433 -36.875 1 43.4 ? C5 GAL 201 B 1 HETATM 6 C C6 GAL . . . H 2 15.223 -15.169 -37.535 1 43.55 ? C6 GAL 201 B 1 HETATM 7 O O1 GAL . . . H 2 10.635 -16.1 -38.328 1 49.48 ? O1 GAL 201 B 1 HETATM 8 O O2 GAL . . . H 2 10.438 -17.199 -35.724 1 46.4 ? O2 GAL 201 B 1 HETATM 9 O O3 GAL . . . H 2 12.708 -18.111 -34.594 1 48.26 ? O3 GAL 201 B 1 HETATM 10 O O4 GAL . . . H 2 14.694 -17.629 -36.667 1 39.55 ? O4 GAL 201 B 1 HETATM 11 O O5 GAL . . . H 2 12.885 -15.701 -37.855 1 37.12 ? O5 GAL 201 B 1 HETATM 12 O O6 GAL . . . H 2 15.077 -14.176 -38.514 1 44.49 ? O6 GAL 201 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #