data_4F9A # _model_server_result.job_id k12kkyRNksrVH3J_9MMnTg _model_server_result.datetime_utc '2024-11-26 08:50:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f9a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":401}' # _entry.id 4F9A # _exptl.entry_id 4F9A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F9A _cell.length_a 61.08 _cell.length_b 67.04 _cell.length_c 237.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F9A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,K,L 1 1 C,D,H,I,J,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 147 A ASN 182 1_555 F MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc2 A OD2 ASP 161 A ASP 196 1_555 F MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc3 E O2A ADP . A ADP 601 1_555 F MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc4 E O1B ADP . A ADP 601 1_555 F MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc5 F MG MG . A MG 602 1_555 K O HOH . A HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc6 F MG MG . A MG 602 1_555 K O HOH . A HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc7 B SG CYS 90 B CYS 296 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc8 B SG CYS 93 B CYS 299 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc9 B NE2 HIS 103 B HIS 309 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc10 B ND1 HIS 109 B HIS 315 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc11 C OD1 ASN 147 C ASN 182 1_555 I MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc12 C OD2 ASP 161 C ASP 196 1_555 I MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc13 H O2A ADP . C ADP 601 1_555 I MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? metalc ? metalc14 H O1B ADP . C ADP 601 1_555 I MG MG . C MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc15 I MG MG . C MG 602 1_555 M O HOH . C HOH 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc16 I MG MG . C MG 602 1_555 M O HOH . C HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? metalc ? metalc17 D SG CYS 90 D CYS 296 1_555 J ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc18 D SG CYS 93 D CYS 299 1_555 J ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc19 D NE2 HIS 103 D HIS 309 1_555 J ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc20 D ND1 HIS 109 D HIS 315 1_555 J ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4F9A _atom_sites.fract_transf_matrix[1][1] 0.016372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014916 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ADP A 1 601 1 ADP ADP . F 4 MG A 1 602 2 MG MG . G 5 ZN B 1 401 3 ZN ZN . H 3 ADP C 1 601 1 ADP ADP . I 4 MG C 1 602 2 MG MG . J 5 ZN D 1 401 3 ZN ZN . K 6 HOH A 1 701 1 HOH HOH . K 6 HOH A 2 702 2 HOH HOH . K 6 HOH A 3 703 3 HOH HOH . K 6 HOH A 4 704 9 HOH HOH . K 6 HOH A 5 705 10 HOH HOH . K 6 HOH A 6 706 11 HOH HOH . K 6 HOH A 7 707 12 HOH HOH . K 6 HOH A 8 708 13 HOH HOH . K 6 HOH A 9 709 14 HOH HOH . K 6 HOH A 10 710 15 HOH HOH . K 6 HOH A 11 711 16 HOH HOH . K 6 HOH A 12 712 17 HOH HOH . K 6 HOH A 13 713 18 HOH HOH . K 6 HOH A 14 714 21 HOH HOH . K 6 HOH A 15 715 22 HOH HOH . K 6 HOH A 16 716 24 HOH HOH . K 6 HOH A 17 717 25 HOH HOH . K 6 HOH A 18 718 26 HOH HOH . K 6 HOH A 19 719 27 HOH HOH . K 6 HOH A 20 720 28 HOH HOH . K 6 HOH A 21 721 29 HOH HOH . K 6 HOH A 22 722 30 HOH HOH . K 6 HOH A 23 723 32 HOH HOH . K 6 HOH A 24 724 33 HOH HOH . K 6 HOH A 25 725 34 HOH HOH . K 6 HOH A 26 726 38 HOH HOH . K 6 HOH A 27 727 2 HOH HOH . K 6 HOH A 28 728 3 HOH HOH . K 6 HOH A 29 729 5 HOH HOH . K 6 HOH A 30 730 6 HOH HOH . K 6 HOH A 31 731 10 HOH HOH . K 6 HOH A 32 732 11 HOH HOH . K 6 HOH A 33 733 14 HOH HOH . K 6 HOH A 34 734 15 HOH HOH . K 6 HOH A 35 735 17 HOH HOH . K 6 HOH A 36 736 18 HOH HOH . K 6 HOH A 37 737 20 HOH HOH . K 6 HOH A 38 738 21 HOH HOH . K 6 HOH A 39 739 22 HOH HOH . K 6 HOH A 40 740 23 HOH HOH . K 6 HOH A 41 741 24 HOH HOH . K 6 HOH A 42 742 25 HOH HOH . K 6 HOH A 43 743 26 HOH HOH . L 6 HOH B 1 501 8 HOH HOH . L 6 HOH B 2 502 23 HOH HOH . L 6 HOH B 3 503 31 HOH HOH . L 6 HOH B 4 504 13 HOH HOH . L 6 HOH B 5 505 29 HOH HOH . L 6 HOH B 6 506 2 HOH HOH . M 6 HOH C 1 701 4 HOH HOH . M 6 HOH C 2 702 5 HOH HOH . M 6 HOH C 3 703 6 HOH HOH . M 6 HOH C 4 704 7 HOH HOH . M 6 HOH C 5 705 19 HOH HOH . M 6 HOH C 6 706 20 HOH HOH . M 6 HOH C 7 707 35 HOH HOH . M 6 HOH C 8 708 36 HOH HOH . M 6 HOH C 9 709 37 HOH HOH . M 6 HOH C 10 710 9 HOH HOH . M 6 HOH C 11 711 12 HOH HOH . M 6 HOH C 12 712 16 HOH HOH . M 6 HOH C 13 713 19 HOH HOH . M 6 HOH C 14 714 27 HOH HOH . M 6 HOH C 15 715 3 HOH HOH . M 6 HOH C 16 716 6 HOH HOH . M 6 HOH C 17 717 9 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 5 _atom_site.Cartn_x 51.549 _atom_site.Cartn_y -11.224 _atom_site.Cartn_z 18.036 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 85.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #