data_4F9B # _model_server_result.job_id oTkpUlIJ0HfJsyBmF_OcpA _model_server_result.datetime_utc '2024-10-31 07:16:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4f9b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 4F9B # _exptl.entry_id 4F9B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4F9B _cell.length_a 60.92 _cell.length_b 67.88 _cell.length_c 238.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4F9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 90 B CYS 296 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc2 B SG CYS 93 B CYS 299 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc3 B NE2 HIS 103 B HIS 309 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc4 B ND1 HIS 109 B HIS 315 1_555 F ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc5 D SG CYS 90 D CYS 296 1_555 H ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc6 D SG CYS 93 D CYS 299 1_555 H ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc7 D NE2 HIS 103 D HIS 309 1_555 H ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc8 D ND1 HIS 109 D HIS 315 1_555 H ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4F9B _atom_sites.fract_transf_matrix[1][1] 0.016415 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 0SY A 1 601 1 0SY DRG . F 4 ZN B 1 401 3 ZN ZN . G 3 0SY C 1 601 1 0SY DRG . H 4 ZN D 1 401 3 ZN ZN . I 5 HOH A 1 701 3 HOH HOH . I 5 HOH A 2 702 12 HOH HOH . I 5 HOH A 3 703 14 HOH HOH . I 5 HOH A 4 704 15 HOH HOH . I 5 HOH A 5 705 21 HOH HOH . I 5 HOH A 6 706 22 HOH HOH . I 5 HOH A 7 707 24 HOH HOH . I 5 HOH A 8 708 25 HOH HOH . I 5 HOH A 9 709 26 HOH HOH . I 5 HOH A 10 710 28 HOH HOH . I 5 HOH A 11 711 30 HOH HOH . I 5 HOH A 12 712 32 HOH HOH . I 5 HOH A 13 713 34 HOH HOH . I 5 HOH A 14 714 69 HOH HOH . I 5 HOH A 15 715 70 HOH HOH . I 5 HOH A 16 716 72 HOH HOH . I 5 HOH A 17 717 75 HOH HOH . I 5 HOH A 18 718 76 HOH HOH . I 5 HOH A 19 719 77 HOH HOH . I 5 HOH A 20 720 79 HOH HOH . I 5 HOH A 21 721 80 HOH HOH . I 5 HOH A 22 722 82 HOH HOH . I 5 HOH A 23 723 83 HOH HOH . I 5 HOH A 24 724 90 HOH HOH . I 5 HOH A 25 725 105 HOH HOH . I 5 HOH A 26 726 106 HOH HOH . I 5 HOH A 27 727 108 HOH HOH . I 5 HOH A 28 728 109 HOH HOH . I 5 HOH A 29 729 110 HOH HOH . I 5 HOH A 30 730 112 HOH HOH . I 5 HOH A 31 731 113 HOH HOH . I 5 HOH A 32 732 2 HOH HOH . I 5 HOH A 33 733 3 HOH HOH . I 5 HOH A 34 734 5 HOH HOH . I 5 HOH A 35 735 6 HOH HOH . I 5 HOH A 36 736 10 HOH HOH . I 5 HOH A 37 737 11 HOH HOH . I 5 HOH A 38 738 14 HOH HOH . I 5 HOH A 39 739 18 HOH HOH . I 5 HOH A 40 740 20 HOH HOH . I 5 HOH A 41 741 21 HOH HOH . I 5 HOH A 42 742 22 HOH HOH . I 5 HOH A 43 743 23 HOH HOH . I 5 HOH A 44 744 24 HOH HOH . I 5 HOH A 45 745 25 HOH HOH . I 5 HOH A 46 746 26 HOH HOH . I 5 HOH A 47 747 11 HOH HOH . I 5 HOH A 48 748 13 HOH HOH . I 5 HOH A 49 749 18 HOH HOH . I 5 HOH A 50 750 21 HOH HOH . I 5 HOH A 51 751 23 HOH HOH . I 5 HOH A 52 752 34 HOH HOH . I 5 HOH A 53 753 38 HOH HOH . J 5 HOH B 1 501 8 HOH HOH . J 5 HOH B 2 502 31 HOH HOH . J 5 HOH B 3 503 81 HOH HOH . J 5 HOH B 4 504 85 HOH HOH . J 5 HOH B 5 505 86 HOH HOH . J 5 HOH B 6 506 87 HOH HOH . J 5 HOH B 7 507 88 HOH HOH . J 5 HOH B 8 508 89 HOH HOH . J 5 HOH B 9 509 13 HOH HOH . J 5 HOH B 10 510 29 HOH HOH . J 5 HOH B 11 511 2 HOH HOH . J 5 HOH B 12 512 1 HOH HOH . K 5 HOH C 1 701 7 HOH HOH . K 5 HOH C 2 702 19 HOH HOH . K 5 HOH C 3 703 20 HOH HOH . K 5 HOH C 4 704 35 HOH HOH . K 5 HOH C 5 705 36 HOH HOH . K 5 HOH C 6 706 54 HOH HOH . K 5 HOH C 7 707 55 HOH HOH . K 5 HOH C 8 708 56 HOH HOH . K 5 HOH C 9 709 59 HOH HOH . K 5 HOH C 10 710 61 HOH HOH . K 5 HOH C 11 711 62 HOH HOH . K 5 HOH C 12 712 63 HOH HOH . K 5 HOH C 13 713 64 HOH HOH . K 5 HOH C 14 714 66 HOH HOH . K 5 HOH C 15 715 95 HOH HOH . K 5 HOH C 16 716 103 HOH HOH . K 5 HOH C 17 717 107 HOH HOH . K 5 HOH C 18 718 111 HOH HOH . K 5 HOH C 19 719 115 HOH HOH . K 5 HOH C 20 720 117 HOH HOH . K 5 HOH C 21 721 118 HOH HOH . K 5 HOH C 22 722 9 HOH HOH . K 5 HOH C 23 723 12 HOH HOH . K 5 HOH C 24 724 16 HOH HOH . K 5 HOH C 25 725 19 HOH HOH . K 5 HOH C 26 726 27 HOH HOH . K 5 HOH C 27 727 6 HOH HOH . K 5 HOH C 28 728 9 HOH HOH . K 5 HOH C 29 729 6 HOH HOH . K 5 HOH C 30 730 9 HOH HOH . K 5 HOH C 31 731 15 HOH HOH . K 5 HOH C 32 732 28 HOH HOH . K 5 HOH C 33 733 45 HOH HOH . L 5 HOH D 1 501 67 HOH HOH . L 5 HOH D 2 502 114 HOH HOH . L 5 HOH D 3 503 116 HOH HOH . L 5 HOH D 4 504 3 HOH HOH . L 5 HOH D 5 505 17 HOH HOH . L 5 HOH D 6 506 32 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 51.059 _atom_site.Cartn_y -12.031 _atom_site.Cartn_z 18.334 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 81.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #