data_4FA3 # _model_server_result.job_id B9gJh-kxltpjtuTeSxmXaw _model_server_result.datetime_utc '2024-11-22 19:29:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fa3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4FA3 # _exptl.entry_id 4FA3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 319.375 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R)-1-(naphthalen-2-ylsulfonyl)piperidine-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FA3 _cell.length_a 57.127 _cell.length_b 63.469 _cell.length_c 96.445 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FA3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H17 N O4 S' _chem_comp.formula_weight 319.375 _chem_comp.id 0SL _chem_comp.mon_nstd_flag . _chem_comp.name '(3R)-1-(naphthalen-2-ylsulfonyl)piperidine-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAD CAP 0SL doub 1 n n CAM CAL 0SL sing 2 n n CAM CAT 0SL sing 3 n n CAL CAN 0SL sing 4 n n CAP CAT 0SL sing 5 n n CAP OAA 0SL sing 6 n n CAT CAO 0SL sing 7 n n CAN NAU 0SL sing 8 n n CAO NAU 0SL sing 9 n n CAE CAH 0SL doub 10 n y CAE CAF 0SL sing 11 n y NAU SAV 0SL sing 12 n n CAH CAR 0SL sing 13 n y CAF CAI 0SL doub 14 n y CAR CAJ 0SL doub 15 n y CAR CAS 0SL sing 16 n y CAI CAS 0SL sing 17 n y CAJ CAG 0SL sing 18 n y CAS CAK 0SL doub 19 n y CAG CAQ 0SL doub 20 n y CAK CAQ 0SL sing 21 n y CAQ SAV 0SL sing 22 n n SAV OAB 0SL doub 23 n n SAV OAC 0SL doub 24 n n CAK H1 0SL sing 25 n n CAI H2 0SL sing 26 n n CAF H3 0SL sing 27 n n CAE H4 0SL sing 28 n n CAH H5 0SL sing 29 n n CAJ H6 0SL sing 30 n n CAG H7 0SL sing 31 n n CAO H8 0SL sing 32 n n CAO H9 0SL sing 33 n n CAN H10 0SL sing 34 n n CAN H11 0SL sing 35 n n CAL H12 0SL sing 36 n n CAL H13 0SL sing 37 n n CAM H14 0SL sing 38 n n CAM H15 0SL sing 39 n n CAT H16 0SL sing 40 n n OAA H17 0SL sing 41 n n # _atom_sites.entry_id 4FA3 _atom_sites.fract_transf_matrix[1][1] 0.017505 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015756 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 401 700 NAP NAP . C 3 0SL A 1 402 1 0SL DRG . D 4 EDO A 1 403 1 EDO EDO . E 5 ACT A 1 404 1 ACT ACT . F 6 HOH A 1 501 1 HOH HOH . F 6 HOH A 2 502 2 HOH HOH . F 6 HOH A 3 503 3 HOH HOH . F 6 HOH A 4 504 4 HOH HOH . F 6 HOH A 5 505 5 HOH HOH . F 6 HOH A 6 506 6 HOH HOH . F 6 HOH A 7 507 7 HOH HOH . F 6 HOH A 8 508 8 HOH HOH . F 6 HOH A 9 509 9 HOH HOH . F 6 HOH A 10 510 11 HOH HOH . F 6 HOH A 11 511 12 HOH HOH . F 6 HOH A 12 512 13 HOH HOH . F 6 HOH A 13 513 14 HOH HOH . F 6 HOH A 14 514 15 HOH HOH . F 6 HOH A 15 515 16 HOH HOH . F 6 HOH A 16 516 17 HOH HOH . F 6 HOH A 17 517 18 HOH HOH . F 6 HOH A 18 518 19 HOH HOH . F 6 HOH A 19 519 20 HOH HOH . F 6 HOH A 20 520 21 HOH HOH . F 6 HOH A 21 521 22 HOH HOH . F 6 HOH A 22 522 23 HOH HOH . F 6 HOH A 23 523 24 HOH HOH . F 6 HOH A 24 524 25 HOH HOH . F 6 HOH A 25 525 26 HOH HOH . F 6 HOH A 26 526 27 HOH HOH . F 6 HOH A 27 527 28 HOH HOH . F 6 HOH A 28 528 29 HOH HOH . F 6 HOH A 29 529 30 HOH HOH . F 6 HOH A 30 530 31 HOH HOH . F 6 HOH A 31 531 32 HOH HOH . F 6 HOH A 32 532 33 HOH HOH . F 6 HOH A 33 533 34 HOH HOH . F 6 HOH A 34 534 35 HOH HOH . F 6 HOH A 35 535 36 HOH HOH . F 6 HOH A 36 536 37 HOH HOH . F 6 HOH A 37 537 38 HOH HOH . F 6 HOH A 38 538 39 HOH HOH . F 6 HOH A 39 539 41 HOH HOH . F 6 HOH A 40 540 42 HOH HOH . F 6 HOH A 41 541 43 HOH HOH . F 6 HOH A 42 542 44 HOH HOH . F 6 HOH A 43 543 45 HOH HOH . F 6 HOH A 44 544 46 HOH HOH . F 6 HOH A 45 545 47 HOH HOH . F 6 HOH A 46 546 48 HOH HOH . F 6 HOH A 47 547 49 HOH HOH . F 6 HOH A 48 548 50 HOH HOH . F 6 HOH A 49 549 51 HOH HOH . F 6 HOH A 50 550 55 HOH HOH . F 6 HOH A 51 551 56 HOH HOH . F 6 HOH A 52 552 57 HOH HOH . F 6 HOH A 53 553 58 HOH HOH . F 6 HOH A 54 554 60 HOH HOH . F 6 HOH A 55 555 61 HOH HOH . F 6 HOH A 56 556 62 HOH HOH . F 6 HOH A 57 557 63 HOH HOH . F 6 HOH A 58 558 64 HOH HOH . F 6 HOH A 59 559 65 HOH HOH . F 6 HOH A 60 560 67 HOH HOH . F 6 HOH A 61 561 68 HOH HOH . F 6 HOH A 62 562 69 HOH HOH . F 6 HOH A 63 563 70 HOH HOH . F 6 HOH A 64 564 72 HOH HOH . F 6 HOH A 65 565 73 HOH HOH . F 6 HOH A 66 566 74 HOH HOH . F 6 HOH A 67 567 75 HOH HOH . F 6 HOH A 68 568 76 HOH HOH . F 6 HOH A 69 569 77 HOH HOH . F 6 HOH A 70 570 78 HOH HOH . F 6 HOH A 71 571 79 HOH HOH . F 6 HOH A 72 572 80 HOH HOH . F 6 HOH A 73 573 81 HOH HOH . F 6 HOH A 74 574 82 HOH HOH . F 6 HOH A 75 575 83 HOH HOH . F 6 HOH A 76 576 84 HOH HOH . F 6 HOH A 77 577 85 HOH HOH . F 6 HOH A 78 578 86 HOH HOH . F 6 HOH A 79 579 87 HOH HOH . F 6 HOH A 80 580 88 HOH HOH . F 6 HOH A 81 581 89 HOH HOH . F 6 HOH A 82 582 90 HOH HOH . F 6 HOH A 83 583 91 HOH HOH . F 6 HOH A 84 584 92 HOH HOH . F 6 HOH A 85 585 93 HOH HOH . F 6 HOH A 86 586 94 HOH HOH . F 6 HOH A 87 587 95 HOH HOH . F 6 HOH A 88 588 96 HOH HOH . F 6 HOH A 89 589 97 HOH HOH . F 6 HOH A 90 590 98 HOH HOH . F 6 HOH A 91 591 99 HOH HOH . F 6 HOH A 92 592 100 HOH HOH . F 6 HOH A 93 593 101 HOH HOH . F 6 HOH A 94 594 102 HOH HOH . F 6 HOH A 95 595 103 HOH HOH . F 6 HOH A 96 596 104 HOH HOH . F 6 HOH A 97 597 105 HOH HOH . F 6 HOH A 98 598 106 HOH HOH . F 6 HOH A 99 599 107 HOH HOH . F 6 HOH A 100 600 108 HOH HOH . F 6 HOH A 101 601 109 HOH HOH . F 6 HOH A 102 602 110 HOH HOH . F 6 HOH A 103 603 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAK 0SL . . . C 3 -2.965 6.848 15.253 1 33.29 ? CAK 0SL 402 A 1 HETATM 2 C CAS 0SL . . . C 3 -3.393 8.146 14.907 1 32.52 ? CAS 0SL 402 A 1 HETATM 3 C CAI 0SL . . . C 3 -2.475 9.155 14.728 1 33.71 ? CAI 0SL 402 A 1 HETATM 4 C CAF 0SL . . . C 3 -2.932 10.441 14.375 1 35.6 ? CAF 0SL 402 A 1 HETATM 5 C CAE 0SL . . . C 3 -4.287 10.741 14.172 1 33.66 ? CAE 0SL 402 A 1 HETATM 6 C CAH 0SL . . . C 3 -5.222 9.723 14.343 1 35.22 ? CAH 0SL 402 A 1 HETATM 7 C CAR 0SL . . . C 3 -4.76 8.443 14.707 1 33.63 ? CAR 0SL 402 A 1 HETATM 8 C CAJ 0SL . . . C 3 -5.709 7.453 14.856 1 34.92 ? CAJ 0SL 402 A 1 HETATM 9 C CAG 0SL . . . C 3 -5.3 6.18 15.219 1 35.36 ? CAG 0SL 402 A 1 HETATM 10 C CAQ 0SL . . . C 3 -3.95 5.9 15.437 1 32.74 ? CAQ 0SL 402 A 1 HETATM 11 S SAV 0SL . . . C 3 -3.639 4.316 15.83 1 34.03 ? SAV 0SL 402 A 1 HETATM 12 O OAB 0SL . . . C 3 -4.929 3.802 16.344 1 30.97 ? OAB 0SL 402 A 1 HETATM 13 O OAC 0SL . . . C 3 -2.494 4.339 16.8 1 34.79 ? OAC 0SL 402 A 1 HETATM 14 N NAU 0SL . . . C 3 -3.4 3.651 14.277 1 33.32 ? NAU 0SL 402 A 1 HETATM 15 C CAO 0SL . . . C 3 -1.961 3.351 14.048 1 28.89 ? CAO 0SL 402 A 1 HETATM 16 C CAN 0SL . . . C 3 -4.433 2.65 13.933 1 31.93 ? CAN 0SL 402 A 1 HETATM 17 C CAL 0SL . . . C 3 -4.249 2.027 12.527 1 31.12 ? CAL 0SL 402 A 1 HETATM 18 C CAM 0SL . . . C 3 -2.842 2.129 12 1 29.92 ? CAM 0SL 402 A 1 HETATM 19 C CAT 0SL . . . C 3 -1.803 2.17 13.128 1 29.37 ? CAT 0SL 402 A 1 HETATM 20 C CAP 0SL . . . C 3 -0.374 2.178 12.564 1 28.55 ? CAP 0SL 402 A 1 HETATM 21 O OAD 0SL . . . C 3 -0.245 1.714 11.406 1 22.9 ? OAD 0SL 402 A 1 HETATM 22 O OAA 0SL . . . C 3 0.558 2.543 13.356 1 28.59 ? OAA 0SL 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #