data_4FCA # _model_server_result.job_id ND1c9952EtUjRbj7tgUxfA _model_server_result.datetime_utc '2024-12-29 15:58:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fca # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 4FCA # _exptl.entry_id 4FCA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FCA _cell.length_a 72.279 _cell.length_b 156.18 _cell.length_c 48.225 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FCA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 29 A GLY 58 1_555 A N MSE 30 A MSE 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C MSE 30 A MSE 59 1_555 A N ARG 31 A ARG 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C GLY 37 A GLY 66 1_555 A N MSE 38 A MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 38 A MSE 67 1_555 A N SER 39 A SER 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C ARG 137 A ARG 166 1_555 A N MSE 138 A MSE 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale6 A C MSE 138 A MSE 167 1_555 A N LEU 139 A LEU 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C GLU 149 A GLU 178 1_555 A N MSE 150 A MSE 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale8 A C MSE 150 A MSE 179 1_555 A N LYS 151 A LYS 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 A C THR 158 A THR 187 1_555 A N MSE 159 A MSE 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale10 A C MSE 159 A MSE 188 1_555 A N HIS 160 A HIS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 A C LYS 189 A LYS 218 1_555 A N MSE 190 A MSE 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale12 A C MSE 190 A MSE 219 1_555 A N SER 191 A SER 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale13 A C TYR 219 A TYR 248 1_555 A N MSE 220 A MSE 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale14 A C MSE 220 A MSE 249 1_555 A N TYR 221 A TYR 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale15 A C LYS 311 A LYS 340 1_555 A N MSE 312 A MSE 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 A C MSE 312 A MSE 341 1_555 A N ASN 313 A ASN 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale17 A C VAL 319 A VAL 348 1_555 A N MSE 320 A MSE 349 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale18 A C MSE 320 A MSE 349 1_555 A N PHE 321 A PHE 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale19 A C GLN 338 A GLN 367 1_555 A N MSE 339 A MSE 368 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale20 A C MSE 339 A MSE 368 1_555 A N TYR 340 A TYR 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 A C GLN 357 A GLN 386 1_555 A N MSE 358 A MSE 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale22 A C MSE 358 A MSE 387 1_555 A N PHE 359 A PHE 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 A C TYR 361 A TYR 390 1_555 A N MSE 362 A MSE 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale24 A C MSE 362 A MSE 391 1_555 A N THR 363 A THR 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 A C ASN 433 A ASN 462 1_555 A N MSE 434 A MSE 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 A C MSE 434 A MSE 463 1_555 A N VAL 435 A VAL 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale27 A C ILE 462 A ILE 491 1_555 A N MSE 463 A MSE 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale28 A C MSE 463 A MSE 492 1_555 A N GLN 464 A GLN 493 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A NE2 HIS 252 A HIS 281 1_555 C NI NI . A NI 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc2 A NE2 HIS 256 A HIS 285 1_555 C NI NI . A NI 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc3 A OE2 GLU 270 A GLU 299 1_555 C NI NI . A NI 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc4 A OE1 GLU 270 A GLU 299 1_555 C NI NI . A NI 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc5 B N1 IMD . A IMD 601 1_555 C NI NI . A NI 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc6 C NI NI . A NI 602 1_555 D O HOH . A HOH 771 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 160 n y N1 C5 IMD sing 161 n y N1 HN1 IMD sing 162 n n C2 N3 IMD doub 163 n y C2 H2 IMD sing 164 n n N3 C4 IMD sing 165 n y N3 HN3 IMD sing 166 n n C4 C5 IMD doub 167 n y C4 H4 IMD sing 168 n n C5 H5 IMD sing 169 n n # _atom_sites.entry_id 4FCA _atom_sites.fract_transf_matrix[1][1] 0.013835 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020736 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 601 1 IMD IMD . C 3 NI A 1 602 1 NI NI . D 4 HOH A 1 701 1 HOH HOH . D 4 HOH A 2 702 2 HOH HOH . D 4 HOH A 3 703 3 HOH HOH . D 4 HOH A 4 704 4 HOH HOH . D 4 HOH A 5 705 5 HOH HOH . D 4 HOH A 6 706 6 HOH HOH . D 4 HOH A 7 707 7 HOH HOH . D 4 HOH A 8 708 8 HOH HOH . D 4 HOH A 9 709 9 HOH HOH . D 4 HOH A 10 710 10 HOH HOH . D 4 HOH A 11 711 11 HOH HOH . D 4 HOH A 12 712 12 HOH HOH . D 4 HOH A 13 713 13 HOH HOH . D 4 HOH A 14 714 14 HOH HOH . D 4 HOH A 15 715 15 HOH HOH . D 4 HOH A 16 716 16 HOH HOH . D 4 HOH A 17 717 17 HOH HOH . D 4 HOH A 18 718 18 HOH HOH . D 4 HOH A 19 719 19 HOH HOH . D 4 HOH A 20 720 20 HOH HOH . D 4 HOH A 21 721 21 HOH HOH . D 4 HOH A 22 722 22 HOH HOH . D 4 HOH A 23 723 23 HOH HOH . D 4 HOH A 24 724 24 HOH HOH . D 4 HOH A 25 725 25 HOH HOH . D 4 HOH A 26 726 26 HOH HOH . D 4 HOH A 27 727 27 HOH HOH . D 4 HOH A 28 728 28 HOH HOH . D 4 HOH A 29 729 29 HOH HOH . D 4 HOH A 30 730 30 HOH HOH . D 4 HOH A 31 731 31 HOH HOH . D 4 HOH A 32 732 32 HOH HOH . D 4 HOH A 33 733 34 HOH HOH . D 4 HOH A 34 734 35 HOH HOH . D 4 HOH A 35 735 36 HOH HOH . D 4 HOH A 36 736 37 HOH HOH . D 4 HOH A 37 737 38 HOH HOH . D 4 HOH A 38 738 39 HOH HOH . D 4 HOH A 39 739 40 HOH HOH . D 4 HOH A 40 740 41 HOH HOH . D 4 HOH A 41 741 42 HOH HOH . D 4 HOH A 42 742 43 HOH HOH . D 4 HOH A 43 743 44 HOH HOH . D 4 HOH A 44 744 45 HOH HOH . D 4 HOH A 45 745 46 HOH HOH . D 4 HOH A 46 746 47 HOH HOH . D 4 HOH A 47 747 48 HOH HOH . D 4 HOH A 48 748 50 HOH HOH . D 4 HOH A 49 749 51 HOH HOH . D 4 HOH A 50 750 52 HOH HOH . D 4 HOH A 51 751 53 HOH HOH . D 4 HOH A 52 752 54 HOH HOH . D 4 HOH A 53 753 55 HOH HOH . D 4 HOH A 54 754 56 HOH HOH . D 4 HOH A 55 755 57 HOH HOH . D 4 HOH A 56 756 58 HOH HOH . D 4 HOH A 57 757 59 HOH HOH . D 4 HOH A 58 758 60 HOH HOH . D 4 HOH A 59 759 61 HOH HOH . D 4 HOH A 60 760 62 HOH HOH . D 4 HOH A 61 761 63 HOH HOH . D 4 HOH A 62 762 64 HOH HOH . D 4 HOH A 63 763 65 HOH HOH . D 4 HOH A 64 764 66 HOH HOH . D 4 HOH A 65 765 67 HOH HOH . D 4 HOH A 66 766 69 HOH HOH . D 4 HOH A 67 767 70 HOH HOH . D 4 HOH A 68 768 71 HOH HOH . D 4 HOH A 69 769 72 HOH HOH . D 4 HOH A 70 770 73 HOH HOH . D 4 HOH A 71 771 74 HOH HOH . D 4 HOH A 72 772 75 HOH HOH . D 4 HOH A 73 773 76 HOH HOH . D 4 HOH A 74 774 77 HOH HOH . D 4 HOH A 75 775 78 HOH HOH . D 4 HOH A 76 776 79 HOH HOH . D 4 HOH A 77 777 80 HOH HOH . D 4 HOH A 78 778 81 HOH HOH . D 4 HOH A 79 779 82 HOH HOH . D 4 HOH A 80 780 83 HOH HOH . D 4 HOH A 81 781 84 HOH HOH . D 4 HOH A 82 782 85 HOH HOH . D 4 HOH A 83 783 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . B 2 9.001 33.151 29.318 1 54.38 ? N1 IMD 601 A 1 HETATM 2 C C2 IMD . . . B 2 7.992 32.734 28.518 1 56.18 ? C2 IMD 601 A 1 HETATM 3 N N3 IMD . . . B 2 8.262 33.141 27.254 1 62.84 ? N3 IMD 601 A 1 HETATM 4 C C4 IMD . . . B 2 9.445 33.805 27.262 1 68.9 ? C4 IMD 601 A 1 HETATM 5 C C5 IMD . . . B 2 9.919 33.819 28.572 1 62.87 ? C5 IMD 601 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #