data_4FDO # _model_server_result.job_id IuT51FrLrdPPSpAlVhTvEQ _model_server_result.datetime_utc '2024-12-02 03:58:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fdo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":901}' # _entry.id 4FDO # _exptl.entry_id 4FDO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 338.281 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-nitro-N-[(1R)-1-phenylethyl]-5-(trifluoromethyl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FDO _cell.length_a 127.884 _cell.length_b 127.884 _cell.length_c 64.177 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FDO _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H13 F3 N2 O3' _chem_comp.formula_weight 338.281 _chem_comp.id 0T5 _chem_comp.mon_nstd_flag . _chem_comp.name 3-nitro-N-[(1R)-1-phenylethyl]-5-(trifluoromethyl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 O38 0T5 sing 1 n n N8 C2 0T5 sing 2 n n O10 N8 0T5 doub 3 n n C2 C3 0T5 sing 4 n y C1 C2 0T5 doub 5 n y C1 C6 0T5 sing 6 n y C1 H11 0T5 sing 7 n n C6 C5 0T5 doub 8 n y C7 C6 0T5 sing 9 n n C7 F27 0T5 sing 10 n n F28 C7 0T5 sing 11 n n F29 C7 0T5 sing 12 n n C5 C4 0T5 sing 13 n y C5 H51 0T5 sing 14 n n C3 C4 0T5 doub 15 n y C3 H31 0T5 sing 16 n n C4 C14 0T5 sing 17 n n C14 O15 0T5 doub 18 n n N13 C14 0T5 sing 19 n n N13 C12 0T5 sing 20 n n N13 H131 0T5 sing 21 n n C12 C20 0T5 sing 22 n n C12 H121 0T5 sing 23 n n C13 C12 0T5 sing 24 n n C13 H132 0T5 sing 25 n n C13 H134 0T5 sing 26 n n C13 H133 0T5 sing 27 n n C20 C25 0T5 doub 28 n y C20 C21 0T5 sing 29 n y C25 C24 0T5 sing 30 n y C25 H251 0T5 sing 31 n n C24 C23 0T5 doub 32 n y C24 H241 0T5 sing 33 n n C23 H231 0T5 sing 34 n n C22 C23 0T5 sing 35 n y C22 H221 0T5 sing 36 n n C21 C22 0T5 doub 37 n y C21 H211 0T5 sing 38 n n # _atom_sites.entry_id 4FDO _atom_sites.fract_transf_matrix[1][1] 0.00782 _atom_sites.fract_transf_matrix[1][2] 0.004515 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009029 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015582 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 900 900 FAD FAD . C 3 0T5 A 1 901 901 0T5 0T5 . D 4 HOH A 1 1001 1 HOH HOH . D 4 HOH A 2 1002 2 HOH HOH . D 4 HOH A 3 1003 3 HOH HOH . D 4 HOH A 4 1004 4 HOH HOH . D 4 HOH A 5 1005 5 HOH HOH . D 4 HOH A 6 1006 6 HOH HOH . D 4 HOH A 7 1007 7 HOH HOH . D 4 HOH A 8 1008 8 HOH HOH . D 4 HOH A 9 1009 9 HOH HOH . D 4 HOH A 10 1010 10 HOH HOH . D 4 HOH A 11 1011 11 HOH HOH . D 4 HOH A 12 1012 12 HOH HOH . D 4 HOH A 13 1013 13 HOH HOH . D 4 HOH A 14 1014 14 HOH HOH . D 4 HOH A 15 1015 15 HOH HOH . D 4 HOH A 16 1016 16 HOH HOH . D 4 HOH A 17 1017 17 HOH HOH . D 4 HOH A 18 1018 18 HOH HOH . D 4 HOH A 19 1019 19 HOH HOH . D 4 HOH A 20 1020 20 HOH HOH . D 4 HOH A 21 1021 21 HOH HOH . D 4 HOH A 22 1022 22 HOH HOH . D 4 HOH A 23 1023 23 HOH HOH . D 4 HOH A 24 1024 24 HOH HOH . D 4 HOH A 25 1025 25 HOH HOH . D 4 HOH A 26 1026 26 HOH HOH . D 4 HOH A 27 1027 27 HOH HOH . D 4 HOH A 28 1028 28 HOH HOH . D 4 HOH A 29 1029 29 HOH HOH . D 4 HOH A 30 1030 30 HOH HOH . D 4 HOH A 31 1031 31 HOH HOH . D 4 HOH A 32 1032 32 HOH HOH . D 4 HOH A 33 1033 33 HOH HOH . D 4 HOH A 34 1034 34 HOH HOH . D 4 HOH A 35 1035 35 HOH HOH . D 4 HOH A 36 1036 36 HOH HOH . D 4 HOH A 37 1037 37 HOH HOH . D 4 HOH A 38 1038 38 HOH HOH . D 4 HOH A 39 1039 39 HOH HOH . D 4 HOH A 40 1040 40 HOH HOH . D 4 HOH A 41 1041 41 HOH HOH . D 4 HOH A 42 1042 42 HOH HOH . D 4 HOH A 43 1043 43 HOH HOH . D 4 HOH A 44 1044 44 HOH HOH . D 4 HOH A 45 1045 45 HOH HOH . D 4 HOH A 46 1046 46 HOH HOH . D 4 HOH A 47 1047 47 HOH HOH . D 4 HOH A 48 1048 48 HOH HOH . D 4 HOH A 49 1049 49 HOH HOH . D 4 HOH A 50 1050 50 HOH HOH . D 4 HOH A 51 1051 51 HOH HOH . D 4 HOH A 52 1052 52 HOH HOH . D 4 HOH A 53 1053 53 HOH HOH . D 4 HOH A 54 1054 54 HOH HOH . D 4 HOH A 55 1055 55 HOH HOH . D 4 HOH A 56 1056 56 HOH HOH . D 4 HOH A 57 1057 57 HOH HOH . D 4 HOH A 58 1058 58 HOH HOH . D 4 HOH A 59 1059 59 HOH HOH . D 4 HOH A 60 1060 60 HOH HOH . D 4 HOH A 61 1061 61 HOH HOH . D 4 HOH A 62 1062 62 HOH HOH . D 4 HOH A 63 1063 63 HOH HOH . D 4 HOH A 64 1064 64 HOH HOH . D 4 HOH A 65 1065 65 HOH HOH . D 4 HOH A 66 1066 66 HOH HOH . D 4 HOH A 67 1067 67 HOH HOH . D 4 HOH A 68 1068 68 HOH HOH . D 4 HOH A 69 1069 69 HOH HOH . D 4 HOH A 70 1070 70 HOH HOH . D 4 HOH A 71 1071 71 HOH HOH . D 4 HOH A 72 1072 72 HOH HOH . D 4 HOH A 73 1073 73 HOH HOH . D 4 HOH A 74 1074 74 HOH HOH . D 4 HOH A 75 1075 75 HOH HOH . D 4 HOH A 76 1076 76 HOH HOH . D 4 HOH A 77 1077 77 HOH HOH . D 4 HOH A 78 1078 78 HOH HOH . D 4 HOH A 79 1079 79 HOH HOH . D 4 HOH A 80 1080 80 HOH HOH . D 4 HOH A 81 1081 81 HOH HOH . D 4 HOH A 82 1082 82 HOH HOH . D 4 HOH A 83 1083 83 HOH HOH . D 4 HOH A 84 1084 84 HOH HOH . D 4 HOH A 85 1085 85 HOH HOH . D 4 HOH A 86 1086 86 HOH HOH . D 4 HOH A 87 1087 87 HOH HOH . D 4 HOH A 88 1088 88 HOH HOH . D 4 HOH A 89 1089 89 HOH HOH . D 4 HOH A 90 1090 90 HOH HOH . D 4 HOH A 91 1091 91 HOH HOH . D 4 HOH A 92 1092 92 HOH HOH . D 4 HOH A 93 1093 93 HOH HOH . D 4 HOH A 94 1094 94 HOH HOH . D 4 HOH A 95 1095 95 HOH HOH . D 4 HOH A 96 1096 96 HOH HOH . D 4 HOH A 97 1097 97 HOH HOH . D 4 HOH A 98 1098 98 HOH HOH . D 4 HOH A 99 1099 99 HOH HOH . D 4 HOH A 100 1100 100 HOH HOH . D 4 HOH A 101 1101 101 HOH HOH . D 4 HOH A 102 1102 102 HOH HOH . D 4 HOH A 103 1103 103 HOH HOH . D 4 HOH A 104 1104 104 HOH HOH . D 4 HOH A 105 1105 105 HOH HOH . D 4 HOH A 106 1106 106 HOH HOH . D 4 HOH A 107 1107 107 HOH HOH . D 4 HOH A 108 1108 108 HOH HOH . D 4 HOH A 109 1109 109 HOH HOH . D 4 HOH A 110 1110 110 HOH HOH . D 4 HOH A 111 1111 111 HOH HOH . D 4 HOH A 112 1112 112 HOH HOH . D 4 HOH A 113 1113 113 HOH HOH . D 4 HOH A 114 1114 114 HOH HOH . D 4 HOH A 115 1115 115 HOH HOH . D 4 HOH A 116 1116 116 HOH HOH . D 4 HOH A 117 1117 117 HOH HOH . D 4 HOH A 118 1118 118 HOH HOH . D 4 HOH A 119 1119 119 HOH HOH . D 4 HOH A 120 1120 120 HOH HOH . D 4 HOH A 121 1121 121 HOH HOH . D 4 HOH A 122 1122 122 HOH HOH . D 4 HOH A 123 1123 123 HOH HOH . D 4 HOH A 124 1124 124 HOH HOH . D 4 HOH A 125 1125 125 HOH HOH . D 4 HOH A 126 1126 126 HOH HOH . D 4 HOH A 127 1127 127 HOH HOH . D 4 HOH A 128 1128 128 HOH HOH . D 4 HOH A 129 1129 129 HOH HOH . D 4 HOH A 130 1130 130 HOH HOH . D 4 HOH A 131 1131 131 HOH HOH . D 4 HOH A 132 1132 132 HOH HOH . D 4 HOH A 133 1133 133 HOH HOH . D 4 HOH A 134 1134 134 HOH HOH . D 4 HOH A 135 1135 135 HOH HOH . D 4 HOH A 136 1136 136 HOH HOH . D 4 HOH A 137 1137 137 HOH HOH . D 4 HOH A 138 1138 138 HOH HOH . D 4 HOH A 139 1139 139 HOH HOH . D 4 HOH A 140 1140 140 HOH HOH . D 4 HOH A 141 1141 141 HOH HOH . D 4 HOH A 142 1142 142 HOH HOH . D 4 HOH A 143 1143 143 HOH HOH . D 4 HOH A 144 1144 144 HOH HOH . D 4 HOH A 145 1145 145 HOH HOH . D 4 HOH A 146 1146 146 HOH HOH . D 4 HOH A 147 1147 147 HOH HOH . D 4 HOH A 148 1148 148 HOH HOH . D 4 HOH A 149 1149 149 HOH HOH . D 4 HOH A 150 1150 150 HOH HOH . D 4 HOH A 151 1151 151 HOH HOH . D 4 HOH A 152 1152 152 HOH HOH . D 4 HOH A 153 1153 153 HOH HOH . D 4 HOH A 154 1154 154 HOH HOH . D 4 HOH A 155 1155 155 HOH HOH . D 4 HOH A 156 1156 156 HOH HOH . D 4 HOH A 157 1157 157 HOH HOH . D 4 HOH A 158 1158 158 HOH HOH . D 4 HOH A 159 1159 159 HOH HOH . D 4 HOH A 160 1160 160 HOH HOH . D 4 HOH A 161 1161 161 HOH HOH . D 4 HOH A 162 1162 162 HOH HOH . D 4 HOH A 163 1163 163 HOH HOH . D 4 HOH A 164 1164 164 HOH HOH . D 4 HOH A 165 1165 165 HOH HOH . D 4 HOH A 166 1166 166 HOH HOH . D 4 HOH A 167 1167 167 HOH HOH . D 4 HOH A 168 1168 168 HOH HOH . D 4 HOH A 169 1169 169 HOH HOH . D 4 HOH A 170 1170 170 HOH HOH . D 4 HOH A 171 1171 171 HOH HOH . D 4 HOH A 172 1172 172 HOH HOH . D 4 HOH A 173 1173 173 HOH HOH . D 4 HOH A 174 1174 174 HOH HOH . D 4 HOH A 175 1175 175 HOH HOH . D 4 HOH A 176 1176 176 HOH HOH . D 4 HOH A 177 1177 177 HOH HOH . D 4 HOH A 178 1178 178 HOH HOH . D 4 HOH A 179 1179 179 HOH HOH . D 4 HOH A 180 1180 180 HOH HOH . D 4 HOH A 181 1181 181 HOH HOH . D 4 HOH A 182 1182 182 HOH HOH . D 4 HOH A 183 1183 183 HOH HOH . D 4 HOH A 184 1184 184 HOH HOH . D 4 HOH A 185 1185 185 HOH HOH . D 4 HOH A 186 1186 186 HOH HOH . D 4 HOH A 187 1187 187 HOH HOH . D 4 HOH A 188 1188 188 HOH HOH . D 4 HOH A 189 1189 189 HOH HOH . D 4 HOH A 190 1190 190 HOH HOH . D 4 HOH A 191 1191 191 HOH HOH . D 4 HOH A 192 1192 192 HOH HOH . D 4 HOH A 193 1193 193 HOH HOH . D 4 HOH A 194 1194 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O38 0T5 . . . C 3 36.204 15.472 9.439 1 57.03 ? O38 0T5 901 A 1 HETATM 2 N N8 0T5 . . . C 3 37.332 15.052 8.758 1 61.73 ? N8 0T5 901 A 1 HETATM 3 O O10 0T5 . . . C 3 37.36 15.066 7.369 1 69.45 ? O10 0T5 901 A 1 HETATM 4 C C2 0T5 . . . C 3 38.44 14.598 9.468 1 61.51 ? C2 0T5 901 A 1 HETATM 5 C C1 0T5 . . . C 3 39.702 15.139 9.227 1 63.13 ? C1 0T5 901 A 1 HETATM 6 C C6 0T5 . . . C 3 40.805 14.676 9.939 1 64.72 ? C6 0T5 901 A 1 HETATM 7 C C7 0T5 . . . C 3 42.162 15.279 9.659 1 69.9 ? C7 0T5 901 A 1 HETATM 8 F F28 0T5 . . . C 3 42.072 15.963 8.529 1 73.29 ? F28 0T5 901 A 1 HETATM 9 F F27 0T5 . . . C 3 42.526 16.099 10.636 1 72.52 ? F27 0T5 901 A 1 HETATM 10 F F29 0T5 . . . C 3 43.074 14.321 9.525 1 56.85 ? F29 0T5 901 A 1 HETATM 11 C C5 0T5 . . . C 3 40.626 13.67 10.895 1 58.2 ? C5 0T5 901 A 1 HETATM 12 C C3 0T5 . . . C 3 38.26 13.595 10.408 1 54.66 ? C3 0T5 901 A 1 HETATM 13 C C4 0T5 . . . C 3 39.354 13.129 11.125 1 55.96 ? C4 0T5 901 A 1 HETATM 14 C C14 0T5 . . . C 3 39.127 12.035 12.131 1 51.53 ? C14 0T5 901 A 1 HETATM 15 O O15 0T5 . . . C 3 40.008 11.729 12.914 1 47.82 ? O15 0T5 901 A 1 HETATM 16 N N13 0T5 . . . C 3 37.95 11.41 12.125 1 51.78 ? N13 0T5 901 A 1 HETATM 17 C C12 0T5 . . . C 3 37.598 10.413 13.127 1 47.18 ? C12 0T5 901 A 1 HETATM 18 C C13 0T5 . . . C 3 36.316 9.665 12.737 1 42.2 ? C13 0T5 901 A 1 HETATM 19 C C20 0T5 . . . C 3 37.454 11.052 14.458 1 46.91 ? C20 0T5 901 A 1 HETATM 20 C C25 0T5 . . . C 3 36.569 12.115 14.633 1 42.46 ? C25 0T5 901 A 1 HETATM 21 C C24 0T5 . . . C 3 36.45 12.703 15.888 1 48.45 ? C24 0T5 901 A 1 HETATM 22 C C23 0T5 . . . C 3 37.207 12.238 16.965 1 47.28 ? C23 0T5 901 A 1 HETATM 23 C C22 0T5 . . . C 3 38.091 11.172 16.789 1 46.41 ? C22 0T5 901 A 1 HETATM 24 C C21 0T5 . . . C 3 38.215 10.581 15.532 1 45.93 ? C21 0T5 901 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 1298 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 24 #