data_4FEX # _model_server_result.job_id 6qfZe3SYwb30oH6gt17DyA _model_server_result.datetime_utc '2024-10-10 22:30:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fex # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":303}' # _entry.id 4FEX # _exptl.entry_id 4FEX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 118.84 _cell.angle_beta 103.56 _cell.angle_gamma 93.44 _cell.entry_id 4FEX _cell.length_a 57.669 _cell.length_b 93.694 _cell.length_c 96.318 _cell.Z_PDB 5 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FEX _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F,G,H,R 1 1 B,I,J,S 2 1 C,K,L,M,T 3 1 D,N,O,U 4 1 E,P,Q,V 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 77 A THR 76 1_555 H NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc2 A OG1 THR 77 A THR 76 1_555 H NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc3 A O MET 80 A MET 79 1_555 H NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc4 H NA NA . A NA 303 1_555 R O HOH . A HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc5 H NA NA . A NA 303 1_555 R O HOH . A HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc6 H NA NA . A NA 303 1_555 R O HOH . A HOH 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc7 B OG1 THR 77 B THR 76 1_555 J NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc8 B O THR 77 B THR 76 1_555 J NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc9 B O MET 80 B MET 79 1_555 J NA NA . B NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4FEX _atom_sites.fract_transf_matrix[1][1] 0.01734 _atom_sites.fract_transf_matrix[1][2] 0.001041 _atom_sites.fract_transf_matrix[1][3] 0.005485 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010692 _atom_sites.fract_transf_matrix[2][3] 0.006366 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012429 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 KAN A 1 301 400 KAN KAN . G 3 0TO A 1 302 500 0TO DRG . H 4 NA A 1 303 1 NA NA . I 2 KAN B 1 301 400 KAN KAN . J 4 NA B 1 302 2 NA NA . K 2 KAN C 1 301 400 KAN KAN . L 3 0TO C 1 302 500 0TO DRG . M 5 ACT C 1 303 4 ACT ACT . N 2 KAN D 1 301 400 KAN KAN . O 3 0TO D 1 302 500 0TO DRG . P 2 KAN E 1 301 400 KAN KAN . Q 3 0TO E 1 302 500 0TO DRG . R 6 HOH A 1 401 5 HOH HOH . R 6 HOH A 2 402 25 HOH HOH . R 6 HOH A 3 403 48 HOH HOH . R 6 HOH A 4 404 49 HOH HOH . R 6 HOH A 5 405 65 HOH HOH . R 6 HOH A 6 406 82 HOH HOH . R 6 HOH A 7 407 89 HOH HOH . R 6 HOH A 8 408 125 HOH HOH . R 6 HOH A 9 409 128 HOH HOH . R 6 HOH A 10 410 143 HOH HOH . R 6 HOH A 11 411 173 HOH HOH . R 6 HOH A 12 412 182 HOH HOH . R 6 HOH A 13 413 183 HOH HOH . R 6 HOH A 14 414 188 HOH HOH . R 6 HOH A 15 415 194 HOH HOH . R 6 HOH A 16 416 195 HOH HOH . R 6 HOH A 17 417 207 HOH HOH . R 6 HOH A 18 418 218 HOH HOH . R 6 HOH A 19 419 219 HOH HOH . R 6 HOH A 20 420 220 HOH HOH . R 6 HOH A 21 421 221 HOH HOH . R 6 HOH A 22 422 241 HOH HOH . R 6 HOH A 23 423 246 HOH HOH . R 6 HOH A 24 424 282 HOH HOH . R 6 HOH A 25 425 284 HOH HOH . R 6 HOH A 26 426 285 HOH HOH . R 6 HOH A 27 427 286 HOH HOH . R 6 HOH A 28 428 287 HOH HOH . R 6 HOH A 29 429 288 HOH HOH . R 6 HOH A 30 430 290 HOH HOH . R 6 HOH A 31 431 355 HOH HOH . R 6 HOH A 32 432 374 HOH HOH . R 6 HOH A 33 433 381 HOH HOH . R 6 HOH A 34 434 382 HOH HOH . S 6 HOH B 1 401 10 HOH HOH . S 6 HOH B 2 402 11 HOH HOH . S 6 HOH B 3 403 12 HOH HOH . S 6 HOH B 4 404 13 HOH HOH . S 6 HOH B 5 405 15 HOH HOH . S 6 HOH B 6 406 22 HOH HOH . S 6 HOH B 7 407 32 HOH HOH . S 6 HOH B 8 408 56 HOH HOH . S 6 HOH B 9 409 71 HOH HOH . S 6 HOH B 10 410 98 HOH HOH . S 6 HOH B 11 411 99 HOH HOH . S 6 HOH B 12 412 104 HOH HOH . S 6 HOH B 13 413 111 HOH HOH . S 6 HOH B 14 414 134 HOH HOH . S 6 HOH B 15 415 135 HOH HOH . S 6 HOH B 16 416 136 HOH HOH . S 6 HOH B 17 417 156 HOH HOH . S 6 HOH B 18 418 157 HOH HOH . S 6 HOH B 19 419 160 HOH HOH . S 6 HOH B 20 420 167 HOH HOH . S 6 HOH B 21 421 184 HOH HOH . S 6 HOH B 22 422 193 HOH HOH . S 6 HOH B 23 423 202 HOH HOH . S 6 HOH B 24 424 204 HOH HOH . S 6 HOH B 25 425 262 HOH HOH . S 6 HOH B 26 426 263 HOH HOH . S 6 HOH B 27 427 310 HOH HOH . S 6 HOH B 28 428 314 HOH HOH . S 6 HOH B 29 429 315 HOH HOH . S 6 HOH B 30 430 316 HOH HOH . S 6 HOH B 31 431 317 HOH HOH . S 6 HOH B 32 432 326 HOH HOH . S 6 HOH B 33 433 328 HOH HOH . S 6 HOH B 34 434 334 HOH HOH . S 6 HOH B 35 435 356 HOH HOH . S 6 HOH B 36 436 357 HOH HOH . S 6 HOH B 37 437 361 HOH HOH . S 6 HOH B 38 438 368 HOH HOH . S 6 HOH B 39 439 388 HOH HOH . S 6 HOH B 40 440 392 HOH HOH . S 6 HOH B 41 441 401 HOH HOH . T 6 HOH C 1 401 2 HOH HOH . T 6 HOH C 2 402 8 HOH HOH . T 6 HOH C 3 403 9 HOH HOH . T 6 HOH C 4 404 16 HOH HOH . T 6 HOH C 5 405 17 HOH HOH . T 6 HOH C 6 406 24 HOH HOH . T 6 HOH C 7 407 53 HOH HOH . T 6 HOH C 8 408 70 HOH HOH . T 6 HOH C 9 409 91 HOH HOH . T 6 HOH C 10 410 100 HOH HOH . T 6 HOH C 11 411 101 HOH HOH . T 6 HOH C 12 412 116 HOH HOH . T 6 HOH C 13 413 120 HOH HOH . T 6 HOH C 14 414 122 HOH HOH . T 6 HOH C 15 415 131 HOH HOH . T 6 HOH C 16 416 133 HOH HOH . T 6 HOH C 17 417 145 HOH HOH . T 6 HOH C 18 418 158 HOH HOH . T 6 HOH C 19 419 159 HOH HOH . T 6 HOH C 20 420 180 HOH HOH . T 6 HOH C 21 421 189 HOH HOH . T 6 HOH C 22 422 191 HOH HOH . T 6 HOH C 23 423 201 HOH HOH . T 6 HOH C 24 424 206 HOH HOH . T 6 HOH C 25 425 209 HOH HOH . T 6 HOH C 26 426 212 HOH HOH . T 6 HOH C 27 427 277 HOH HOH . T 6 HOH C 28 428 293 HOH HOH . T 6 HOH C 29 429 294 HOH HOH . T 6 HOH C 30 430 296 HOH HOH . T 6 HOH C 31 431 298 HOH HOH . T 6 HOH C 32 432 299 HOH HOH . T 6 HOH C 33 433 300 HOH HOH . T 6 HOH C 34 434 302 HOH HOH . T 6 HOH C 35 435 303 HOH HOH . T 6 HOH C 36 436 304 HOH HOH . T 6 HOH C 37 437 305 HOH HOH . T 6 HOH C 38 438 363 HOH HOH . T 6 HOH C 39 439 372 HOH HOH . T 6 HOH C 40 440 417 HOH HOH . U 6 HOH D 1 401 21 HOH HOH . U 6 HOH D 2 402 132 HOH HOH . U 6 HOH D 3 403 142 HOH HOH . U 6 HOH D 4 404 146 HOH HOH . U 6 HOH D 5 405 162 HOH HOH . U 6 HOH D 6 406 171 HOH HOH . U 6 HOH D 7 407 177 HOH HOH . U 6 HOH D 8 408 192 HOH HOH . U 6 HOH D 9 409 196 HOH HOH . U 6 HOH D 10 410 199 HOH HOH . U 6 HOH D 11 411 211 HOH HOH . U 6 HOH D 12 412 216 HOH HOH . U 6 HOH D 13 413 237 HOH HOH . U 6 HOH D 14 414 261 HOH HOH . U 6 HOH D 15 415 281 HOH HOH . U 6 HOH D 16 416 307 HOH HOH . U 6 HOH D 17 417 308 HOH HOH . U 6 HOH D 18 418 309 HOH HOH . U 6 HOH D 19 419 311 HOH HOH . U 6 HOH D 20 420 312 HOH HOH . U 6 HOH D 21 421 313 HOH HOH . U 6 HOH D 22 422 367 HOH HOH . U 6 HOH D 23 423 369 HOH HOH . U 6 HOH D 24 424 418 HOH HOH . U 6 HOH D 25 425 419 HOH HOH . V 6 HOH E 1 401 6 HOH HOH . V 6 HOH E 2 402 7 HOH HOH . V 6 HOH E 3 403 14 HOH HOH . V 6 HOH E 4 404 19 HOH HOH . V 6 HOH E 5 405 60 HOH HOH . V 6 HOH E 6 406 68 HOH HOH . V 6 HOH E 7 407 69 HOH HOH . V 6 HOH E 8 408 72 HOH HOH . V 6 HOH E 9 409 93 HOH HOH . V 6 HOH E 10 410 102 HOH HOH . V 6 HOH E 11 411 115 HOH HOH . V 6 HOH E 12 412 137 HOH HOH . V 6 HOH E 13 413 141 HOH HOH . V 6 HOH E 14 414 144 HOH HOH . V 6 HOH E 15 415 149 HOH HOH . V 6 HOH E 16 416 163 HOH HOH . V 6 HOH E 17 417 164 HOH HOH . V 6 HOH E 18 418 166 HOH HOH . V 6 HOH E 19 419 172 HOH HOH . V 6 HOH E 20 420 176 HOH HOH . V 6 HOH E 21 421 179 HOH HOH . V 6 HOH E 22 422 190 HOH HOH . V 6 HOH E 23 423 205 HOH HOH . V 6 HOH E 24 424 210 HOH HOH . V 6 HOH E 25 425 213 HOH HOH . V 6 HOH E 26 426 318 HOH HOH . V 6 HOH E 27 427 319 HOH HOH . V 6 HOH E 28 428 320 HOH HOH . V 6 HOH E 29 429 321 HOH HOH . V 6 HOH E 30 430 323 HOH HOH . V 6 HOH E 31 431 324 HOH HOH . V 6 HOH E 32 432 325 HOH HOH . V 6 HOH E 33 433 394 HOH HOH . V 6 HOH E 34 434 416 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x -24.746 _atom_site.Cartn_y -62.502 _atom_site.Cartn_z 2.986 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #