data_4FFD # _model_server_result.job_id CH3NCTRDwgZ6cDRZ_aAJuA _model_server_result.datetime_utc '2024-10-19 15:38:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ffd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 4FFD # _exptl.entry_id 4FFD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.83 _cell.angle_gamma 90 _cell.entry_id 4FFD _cell.length_a 34.334 _cell.length_b 71.367 _cell.length_c 52.926 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 8 A ASP 8 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc2 A O LEU 10 A LEU 10 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc3 A OD1 ASP 180 A ASP 180 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc4 B MG MG . A MG 301 1_555 C O HOH . A HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4FFD _atom_sites.fract_transf_matrix[1][1] 0.029126 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007712 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019545 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 999 MG MG . C 3 HOH A 1 401 2 HOH TIP . C 3 HOH A 2 402 3 HOH TIP . C 3 HOH A 3 403 4 HOH TIP . C 3 HOH A 4 404 5 HOH TIP . C 3 HOH A 5 405 7 HOH TIP . C 3 HOH A 6 406 8 HOH TIP . C 3 HOH A 7 407 9 HOH TIP . C 3 HOH A 8 408 10 HOH TIP . C 3 HOH A 9 409 11 HOH TIP . C 3 HOH A 10 410 13 HOH TIP . C 3 HOH A 11 411 14 HOH TIP . C 3 HOH A 12 412 15 HOH TIP . C 3 HOH A 13 413 16 HOH TIP . C 3 HOH A 14 414 17 HOH TIP . C 3 HOH A 15 415 18 HOH TIP . C 3 HOH A 16 416 19 HOH TIP . C 3 HOH A 17 417 20 HOH TIP . C 3 HOH A 18 418 21 HOH TIP . C 3 HOH A 19 419 23 HOH TIP . C 3 HOH A 20 420 24 HOH TIP . C 3 HOH A 21 421 25 HOH TIP . C 3 HOH A 22 422 26 HOH TIP . C 3 HOH A 23 423 27 HOH TIP . C 3 HOH A 24 424 28 HOH TIP . C 3 HOH A 25 425 29 HOH TIP . C 3 HOH A 26 426 30 HOH TIP . C 3 HOH A 27 427 31 HOH TIP . C 3 HOH A 28 428 32 HOH TIP . C 3 HOH A 29 429 33 HOH TIP . C 3 HOH A 30 430 34 HOH TIP . C 3 HOH A 31 431 35 HOH TIP . C 3 HOH A 32 432 36 HOH TIP . C 3 HOH A 33 433 37 HOH TIP . C 3 HOH A 34 434 38 HOH TIP . C 3 HOH A 35 435 39 HOH TIP . C 3 HOH A 36 436 40 HOH TIP . C 3 HOH A 37 437 41 HOH TIP . C 3 HOH A 38 438 42 HOH TIP . C 3 HOH A 39 439 43 HOH TIP . C 3 HOH A 40 440 44 HOH TIP . C 3 HOH A 41 441 45 HOH TIP . C 3 HOH A 42 442 46 HOH TIP . C 3 HOH A 43 443 47 HOH TIP . C 3 HOH A 44 444 48 HOH TIP . C 3 HOH A 45 445 49 HOH TIP . C 3 HOH A 46 446 50 HOH TIP . C 3 HOH A 47 447 51 HOH TIP . C 3 HOH A 48 448 53 HOH TIP . C 3 HOH A 49 449 55 HOH TIP . C 3 HOH A 50 450 56 HOH TIP . C 3 HOH A 51 451 57 HOH TIP . C 3 HOH A 52 452 58 HOH TIP . C 3 HOH A 53 453 59 HOH TIP . C 3 HOH A 54 454 60 HOH TIP . C 3 HOH A 55 455 61 HOH TIP . C 3 HOH A 56 456 62 HOH TIP . C 3 HOH A 57 457 63 HOH TIP . C 3 HOH A 58 458 64 HOH TIP . C 3 HOH A 59 459 65 HOH TIP . C 3 HOH A 60 460 66 HOH TIP . C 3 HOH A 61 461 67 HOH TIP . C 3 HOH A 62 462 68 HOH TIP . C 3 HOH A 63 463 69 HOH TIP . C 3 HOH A 64 464 70 HOH TIP . C 3 HOH A 65 465 71 HOH TIP . C 3 HOH A 66 466 72 HOH TIP . C 3 HOH A 67 467 73 HOH TIP . C 3 HOH A 68 468 74 HOH TIP . C 3 HOH A 69 469 75 HOH TIP . C 3 HOH A 70 470 76 HOH TIP . C 3 HOH A 71 471 77 HOH TIP . C 3 HOH A 72 472 78 HOH TIP . C 3 HOH A 73 473 79 HOH TIP . C 3 HOH A 74 474 80 HOH TIP . C 3 HOH A 75 475 81 HOH TIP . C 3 HOH A 76 476 82 HOH TIP . C 3 HOH A 77 477 83 HOH TIP . C 3 HOH A 78 478 84 HOH TIP . C 3 HOH A 79 479 85 HOH TIP . C 3 HOH A 80 480 86 HOH TIP . C 3 HOH A 81 481 87 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.332 _atom_site.Cartn_y 3.336 _atom_site.Cartn_z 11.638 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #