data_4FFW # _model_server_result.job_id 7jkQ8qx4pspDD2FKQK0-LA _model_server_result.datetime_utc '2024-11-22 14:53:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ffw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":801}' # _entry.id 4FFW # _exptl.entry_id 4FFW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 407.314 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-4-OXO-4-[3-(TRIFLUOROMETHYL)-5,6-DIHYDRO[1,2,4]TRIAZOLO[4,3-A]PYRAZIN-7(8H)-YL]-1-(2,4,5-TRIFLUOROPHENYL)BUTAN-2-A MINE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.64 _cell.angle_gamma 90 _cell.entry_id 4FFW _cell.length_a 97.77 _cell.length_b 200.86 _cell.length_c 97.93 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FFW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 289 A CYS 326 1_555 A SG CYS 300 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 346 A CYS 383 1_555 A SG CYS 358 A CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 408 A CYS 445 1_555 A SG CYS 411 A CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 418 A CYS 455 1_555 A SG CYS 436 A CYS 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 A SG CYS 613 A CYS 650 1_555 A SG CYS 726 A CYS 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 B SG CYS 289 B CYS 326 1_555 B SG CYS 300 B CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 346 B CYS 383 1_555 B SG CYS 358 B CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 B SG CYS 408 B CYS 445 1_555 B SG CYS 411 B CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 418 B CYS 455 1_555 B SG CYS 436 B CYS 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf10 B SG CYS 613 B CYS 650 1_555 B SG CYS 726 B CYS 763 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf11 C SG CYS 23 C CYS 23 1_555 C SG CYS 87 C CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf12 C SG CYS 133 C CYS 133 1_555 C SG CYS 193 C CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf13 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf14 D SG CYS 144 D CYS 144 1_555 D SG CYS 199 D CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 E SG CYS 22 H CYS 22 1_555 E SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf16 E SG CYS 144 H CYS 144 1_555 E SG CYS 199 H CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf17 F SG CYS 23 L CYS 23 1_555 F SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf18 F SG CYS 133 L CYS 133 1_555 F SG CYS 193 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C16 H15 F6 N5 O' _chem_comp.formula_weight 407.314 _chem_comp.id 715 _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-4-OXO-4-[3-(TRIFLUOROMETHYL)-5,6-DIHYDRO[1,2,4]TRIAZOLO[4,3-A]PYRAZIN-7(8H)-YL]-1-(2,4,5-TRIFLUOROPHENYL)BUTAN-2-A MINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Sitagliptin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 715 doub 1 n y C1 C6 715 sing 2 n y C1 H1 715 sing 3 n n C2 C3 715 sing 4 n y C2 F10 715 sing 5 n n C3 C4 715 doub 6 n y C3 C11 715 sing 7 n n C4 C5 715 sing 8 n y C4 H4 715 sing 9 n n C5 C6 715 doub 10 n y C5 F9 715 sing 11 n n C6 F46 715 sing 12 n n C11 C12 715 sing 13 n n C11 H111 715 sing 14 n n C11 H112 715 sing 15 n n C12 C15 715 sing 16 n n C12 N20 715 sing 17 n n C12 H12 715 sing 18 n n C15 C16 715 sing 19 n n C15 H151 715 sing 20 n n C15 H152 715 sing 21 n n C16 N19 715 sing 22 n n C16 O22 715 doub 23 n n N19 C25 715 sing 24 n n N19 C29 715 sing 25 n n N20 H201 715 sing 26 n n N20 H202 715 sing 27 n n C25 C26 715 sing 28 n n C25 H251 715 sing 29 n n C25 H252 715 sing 30 n n C26 N27 715 sing 31 n n C26 H261 715 sing 32 n n C26 H262 715 sing 33 n n N27 C28 715 sing 34 n y N27 C39 715 sing 35 n y C28 C29 715 sing 36 n n C28 N41 715 doub 37 n y C29 H291 715 sing 38 n n C29 H292 715 sing 39 n n C39 N40 715 doub 40 n y C39 C42 715 sing 41 n n N40 N41 715 sing 42 n y C42 F43 715 sing 43 n n C42 F44 715 sing 44 n n C42 F45 715 sing 45 n n # _atom_sites.entry_id 4FFW _atom_sites.fract_transf_matrix[1][1] 0.010228 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000651 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004979 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010232 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 715 A 1 801 801 715 715 . H 4 715 B 1 801 801 715 715 . I 5 HOH A 1 901 1 HOH HOH . I 5 HOH A 2 902 2 HOH HOH . I 5 HOH A 3 903 3 HOH HOH . I 5 HOH A 4 904 4 HOH HOH . I 5 HOH A 5 905 5 HOH HOH . I 5 HOH A 6 906 6 HOH HOH . I 5 HOH A 7 907 7 HOH HOH . I 5 HOH A 8 908 9 HOH HOH . I 5 HOH A 9 909 11 HOH HOH . I 5 HOH A 10 910 12 HOH HOH . I 5 HOH A 11 911 13 HOH HOH . I 5 HOH A 12 912 15 HOH HOH . I 5 HOH A 13 913 16 HOH HOH . I 5 HOH A 14 914 21 HOH HOH . I 5 HOH A 15 915 22 HOH HOH . I 5 HOH A 16 916 23 HOH HOH . I 5 HOH A 17 917 26 HOH HOH . I 5 HOH A 18 918 27 HOH HOH . I 5 HOH A 19 919 28 HOH HOH . I 5 HOH A 20 920 29 HOH HOH . I 5 HOH A 21 921 30 HOH HOH . I 5 HOH A 22 922 31 HOH HOH . I 5 HOH A 23 923 36 HOH HOH . I 5 HOH A 24 924 37 HOH HOH . I 5 HOH A 25 925 38 HOH HOH . I 5 HOH A 26 926 39 HOH HOH . I 5 HOH A 27 927 42 HOH HOH . J 5 HOH B 1 901 8 HOH HOH . J 5 HOH B 2 902 10 HOH HOH . J 5 HOH B 3 903 14 HOH HOH . J 5 HOH B 4 904 17 HOH HOH . J 5 HOH B 5 905 19 HOH HOH . J 5 HOH B 6 906 20 HOH HOH . J 5 HOH B 7 907 24 HOH HOH . J 5 HOH B 8 908 25 HOH HOH . J 5 HOH B 9 909 34 HOH HOH . J 5 HOH B 10 910 40 HOH HOH . J 5 HOH B 11 911 41 HOH HOH . K 5 HOH C 1 301 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 715 . . . H 4 49.015 -31.775 29.506 1 69.11 ? C1 715 801 B 1 HETATM 2 C C2 715 . . . H 4 49.812 -31.655 28.37 1 69.33 ? C2 715 801 B 1 HETATM 3 C C3 715 . . . H 4 50.471 -32.771 27.868 1 69.88 ? C3 715 801 B 1 HETATM 4 C C4 715 . . . H 4 50.336 -34.002 28.503 1 68.99 ? C4 715 801 B 1 HETATM 5 C C5 715 . . . H 4 49.541 -34.118 29.64 1 68.9 ? C5 715 801 B 1 HETATM 6 C C6 715 . . . H 4 48.882 -33.008 30.14 1 69.23 ? C6 715 801 B 1 HETATM 7 F F9 715 . . . H 4 49.409 -35.305 30.254 1 68.45 ? F9 715 801 B 1 HETATM 8 F F10 715 . . . H 4 49.93 -30.458 27.767 1 68.95 ? F10 715 801 B 1 HETATM 9 C C11 715 . . . H 4 51.34 -32.672 26.634 1 70.94 ? C11 715 801 B 1 HETATM 10 C C12 715 . . . H 4 50.606 -33.257 25.427 1 72.08 ? C12 715 801 B 1 HETATM 11 C C15 715 . . . H 4 51.378 -32.969 24.14 1 74.28 ? C15 715 801 B 1 HETATM 12 C C16 715 . . . H 4 52.659 -33.779 24.032 1 76.68 ? C16 715 801 B 1 HETATM 13 N N19 715 . . . H 4 53.516 -33.515 23.031 1 80 ? N19 715 801 B 1 HETATM 14 N N20 715 . . . H 4 49.287 -32.662 25.32 1 71.18 ? N20 715 801 B 1 HETATM 15 O O22 715 . . . H 4 52.89 -34.661 24.845 1 76.09 ? O22 715 801 B 1 HETATM 16 C C25 715 . . . H 4 53.561 -32.266 22.261 1 81.39 ? C25 715 801 B 1 HETATM 17 C C26 715 . . . H 4 53.074 -32.589 20.846 1 82.39 ? C26 715 801 B 1 HETATM 18 N N27 715 . . . H 4 53.861 -33.711 20.33 1 83.71 ? N27 715 801 B 1 HETATM 19 C C28 715 . . . H 4 54.521 -34.575 21.105 1 82.81 ? C28 715 801 B 1 HETATM 20 C C29 715 . . . H 4 54.524 -34.49 22.61 1 81.39 ? C29 715 801 B 1 HETATM 21 C C39 715 . . . H 4 54.092 -34.108 19.078 1 86.01 ? C39 715 801 B 1 HETATM 22 N N40 715 . . . H 4 54.875 -35.192 18.984 1 84.73 ? N40 715 801 B 1 HETATM 23 N N41 715 . . . H 4 55.153 -35.493 20.328 1 83.3 ? N41 715 801 B 1 HETATM 24 C C42 715 . . . H 4 53.542 -33.416 17.864 1 88.49 ? C42 715 801 B 1 HETATM 25 F F43 715 . . . H 4 54.123 -32.235 17.746 1 89.72 ? F43 715 801 B 1 HETATM 26 F F44 715 . . . H 4 52.236 -33.265 17.99 1 89.89 ? F44 715 801 B 1 HETATM 27 F F45 715 . . . H 4 53.792 -34.132 16.783 1 89.32 ? F45 715 801 B 1 HETATM 28 F F46 715 . . . H 4 48.117 -33.125 31.239 1 69.69 ? F46 715 801 B 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #