data_4FG3
#
_model_server_result.job_id            Om7YLpT9PPm4W1clmWDtzg 
_model_server_result.datetime_utc      '2024-12-26 09:57:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4fg3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":103}' 
#
_entry.id    4FG3 
#
_exptl.entry_id    4FG3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4FG3 
_cell.length_a            81.559 
_cell.length_b            81.559 
_cell.length_c            33.538 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4FG3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc2 D NE2 HIS 10 D HIS 10 1_555 G ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 114 n n 
C1 C2 GOL sing 115 n n 
C1 H11 GOL sing 116 n n 
C1 H12 GOL sing 117 n n 
O1 HO1 GOL sing 118 n n 
C2 O2 GOL sing 119 n n 
C2 C3 GOL sing 120 n n 
C2 H2 GOL sing 121 n n 
O2 HO2 GOL sing 122 n n 
C3 O3 GOL sing 123 n n 
C3 H31 GOL sing 124 n n 
C3 H32 GOL sing 125 n n 
O3 HO3 GOL sing 126 n n 
#
_atom_sites.entry_id                     4FG3 
_atom_sites.fract_transf_matrix[1][1]    0.012261 
_atom_sites.fract_transf_matrix[1][2]    0.007079 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014158 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029817 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ZN B 1 101 2 ZN ZN . 
F 4 CL B 1 102 1 CL CL . 
G 3 ZN D 1 101 1 ZN ZN . 
H 4 CL D 1 102 1 CL CL . 
I 5 GOL D 1 103 1 GOL GOL . 
J 6 HOH A 1 101 6 HOH HOH . 
J 6 HOH A 2 102 9 HOH HOH . 
J 6 HOH A 3 103 10 HOH HOH . 
J 6 HOH A 4 104 17 HOH HOH . 
J 6 HOH A 5 105 20 HOH HOH . 
J 6 HOH A 6 106 26 HOH HOH . 
K 6 HOH B 1 201 1 HOH HOH . 
K 6 HOH B 2 202 2 HOH HOH . 
K 6 HOH B 3 203 5 HOH HOH . 
K 6 HOH B 4 204 7 HOH HOH . 
K 6 HOH B 5 205 11 HOH HOH . 
K 6 HOH B 6 206 19 HOH HOH . 
K 6 HOH B 7 207 21 HOH HOH . 
K 6 HOH B 8 208 25 HOH HOH . 
K 6 HOH B 9 209 27 HOH HOH . 
K 6 HOH B 10 210 28 HOH HOH . 
K 6 HOH B 11 211 29 HOH HOH . 
K 6 HOH B 12 212 36 HOH HOH . 
L 6 HOH C 1 101 3 HOH HOH . 
L 6 HOH C 2 102 12 HOH HOH . 
L 6 HOH C 3 103 13 HOH HOH . 
L 6 HOH C 4 104 18 HOH HOH . 
L 6 HOH C 5 105 23 HOH HOH . 
L 6 HOH C 6 106 24 HOH HOH . 
L 6 HOH C 7 107 31 HOH HOH . 
M 6 HOH D 1 201 4 HOH HOH . 
M 6 HOH D 2 202 8 HOH HOH . 
M 6 HOH D 3 203 15 HOH HOH . 
M 6 HOH D 4 204 16 HOH HOH . 
M 6 HOH D 5 205 22 HOH HOH . 
M 6 HOH D 6 206 30 HOH HOH . 
M 6 HOH D 7 207 32 HOH HOH . 
M 6 HOH D 8 208 33 HOH HOH . 
M 6 HOH D 9 209 34 HOH HOH . 
M 6 HOH D 10 210 35 HOH HOH . 
M 6 HOH D 11 211 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 5 6.852 -10.263 -2.484 1 29.95 ? C1 GOL 103 D 1 
HETATM 2 O O1 GOL . . . I 5 7.195 -10.884 -3.728 1 34.23 ? O1 GOL 103 D 1 
HETATM 3 C C2 GOL . . . I 5 5.632 -9.364 -2.673 1 29.67 ? C2 GOL 103 D 1 
HETATM 4 O O2 GOL . . . I 5 4.437 -10.15 -2.73 1 31.34 ? O2 GOL 103 D 1 
HETATM 5 C C3 GOL . . . I 5 5.513 -8.381 -1.511 1 29.28 ? C3 GOL 103 D 1 
HETATM 6 O O3 GOL . . . I 5 4.623 -7.308 -1.855 1 29.07 ? O3 GOL 103 D 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#