data_4FGD
#
_model_server_result.job_id            8Ov7Ex-xmh1itWSg4JQJeQ 
_model_server_result.datetime_utc      '2025-04-28 03:29:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4fgd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":201}' 
#
_entry.id    4FGD 
#
_exptl.entry_id    4FGD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.082 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'THIOCYANATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.8 
_cell.angle_gamma         90 
_cell.entry_id            4FGD 
_cell.length_a            39.21 
_cell.length_b            108.4 
_cell.length_c            83.76 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4FGD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
PISA dimeric 2 author_and_software_defined_assembly 5 
PISA dimeric 2 author_and_software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,I 1 1 
B,J 2 1 
C,E,F,K 3 1 
D,G,H,L 4 1 
A,C,E,F,I,K 5 1 
B,D,G,H,J,L 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 7 1_555 A SG CYS 148 A CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 B SG CYS 7 B CYS 7 1_555 B SG CYS 148 B CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 C SG CYS 7 C CYS 7 1_555 C SG CYS 148 C CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf4 D SG CYS 7 D CYS 7 1_555 D SG CYS 148 D CYS 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
covale ? covale1 A C PRO 44 A PRO 44 1_555 A N MSE 45 A MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale2 A C MSE 45 A MSE 45 1_555 A N PRO 46 A PRO 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale3 A C ALA 52 A ALA 52 1_555 A N MSE 53 A MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C MSE 53 A MSE 53 1_555 A N VAL 54 A VAL 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale5 A C PRO 106 A PRO 106 1_555 A N MSE 107 A MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 A C MSE 107 A MSE 107 1_555 A N CYS 108 A CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale7 B C PRO 44 B PRO 44 1_555 B N MSE 45 B MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? 
covale ? covale8 B C MSE 45 B MSE 45 1_555 B N PRO 46 B PRO 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale9 B C ALA 52 B ALA 52 1_555 B N MSE 53 B MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 B C MSE 53 B MSE 53 1_555 B N VAL 54 B VAL 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale11 B C PRO 106 B PRO 106 1_555 B N MSE 107 B MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale12 B C MSE 107 B MSE 107 1_555 B N CYS 108 B CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale13 C C PRO 44 C PRO 44 1_555 C N MSE 45 C MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale14 C C MSE 45 C MSE 45 1_555 C N PRO 46 C PRO 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
covale ? covale15 C C ALA 52 C ALA 52 1_555 C N MSE 53 C MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale16 C C MSE 53 C MSE 53 1_555 C N VAL 54 C VAL 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale17 C C PRO 106 C PRO 106 1_555 C N MSE 107 C MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale18 C C MSE 107 C MSE 107 1_555 C N CYS 108 C CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale19 D C PRO 44 D PRO 44 1_555 D N MSE 45 D MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale20 D C MSE 45 D MSE 45 1_555 D N PRO 46 D PRO 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? 
covale ? covale21 D C ALA 52 D ALA 52 1_555 D N MSE 53 D MSE 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale22 D C MSE 53 D MSE 53 1_555 D N VAL 54 D VAL 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale23 D C PRO 106 D PRO 106 1_555 D N MSE 107 D MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale24 D C MSE 107 D MSE 107 1_555 D N CYS 108 D CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
#
_chem_comp.formula           'C N S -1' 
_chem_comp.formula_weight    58.082 
_chem_comp.id                SCN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'THIOCYANATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S C SCN sing 277 n n 
C N SCN trip 278 n n 
#
_atom_sites.entry_id                     4FGD 
_atom_sites.fract_transf_matrix[1][1]    0.025504 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001694 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009225 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011965 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SCN C 1 201 2 SCN SCN . 
F 2 SCN C 1 202 3 SCN SCN . 
G 2 SCN D 1 201 1 SCN SCN . 
H 3 CL D 1 202 4 CL CL . 
I 4 HOH A 1 201 2 HOH HOH . 
I 4 HOH A 2 202 13 HOH HOH . 
I 4 HOH A 3 203 14 HOH HOH . 
I 4 HOH A 4 204 19 HOH HOH . 
I 4 HOH A 5 205 21 HOH HOH . 
I 4 HOH A 6 206 24 HOH HOH . 
I 4 HOH A 7 207 28 HOH HOH . 
I 4 HOH A 8 208 37 HOH HOH . 
I 4 HOH A 9 209 46 HOH HOH . 
I 4 HOH A 10 210 50 HOH HOH . 
I 4 HOH A 11 211 55 HOH HOH . 
I 4 HOH A 12 212 57 HOH HOH . 
I 4 HOH A 13 213 59 HOH HOH . 
I 4 HOH A 14 214 60 HOH HOH . 
I 4 HOH A 15 215 61 HOH HOH . 
I 4 HOH A 16 216 63 HOH HOH . 
I 4 HOH A 17 217 65 HOH HOH . 
I 4 HOH A 18 218 68 HOH HOH . 
I 4 HOH A 19 219 69 HOH HOH . 
I 4 HOH A 20 220 75 HOH HOH . 
I 4 HOH A 21 221 81 HOH HOH . 
I 4 HOH A 22 222 82 HOH HOH . 
I 4 HOH A 23 223 91 HOH HOH . 
I 4 HOH A 24 224 92 HOH HOH . 
I 4 HOH A 25 225 96 HOH HOH . 
I 4 HOH A 26 226 98 HOH HOH . 
I 4 HOH A 27 227 103 HOH HOH . 
I 4 HOH A 28 228 104 HOH HOH . 
I 4 HOH A 29 229 106 HOH HOH . 
I 4 HOH A 30 230 107 HOH HOH . 
I 4 HOH A 31 231 108 HOH HOH . 
I 4 HOH A 32 232 109 HOH HOH . 
I 4 HOH A 33 233 117 HOH HOH . 
I 4 HOH A 34 234 119 HOH HOH . 
I 4 HOH A 35 235 120 HOH HOH . 
I 4 HOH A 36 236 136 HOH HOH . 
J 4 HOH B 1 201 4 HOH HOH . 
J 4 HOH B 2 202 5 HOH HOH . 
J 4 HOH B 3 203 6 HOH HOH . 
J 4 HOH B 4 204 10 HOH HOH . 
J 4 HOH B 5 205 15 HOH HOH . 
J 4 HOH B 6 206 16 HOH HOH . 
J 4 HOH B 7 207 18 HOH HOH . 
J 4 HOH B 8 208 29 HOH HOH . 
J 4 HOH B 9 209 31 HOH HOH . 
J 4 HOH B 10 210 32 HOH HOH . 
J 4 HOH B 11 211 39 HOH HOH . 
J 4 HOH B 12 212 45 HOH HOH . 
J 4 HOH B 13 213 48 HOH HOH . 
J 4 HOH B 14 214 54 HOH HOH . 
J 4 HOH B 15 215 58 HOH HOH . 
J 4 HOH B 16 216 62 HOH HOH . 
J 4 HOH B 17 217 76 HOH HOH . 
J 4 HOH B 18 218 78 HOH HOH . 
J 4 HOH B 19 219 79 HOH HOH . 
J 4 HOH B 20 220 85 HOH HOH . 
J 4 HOH B 21 221 86 HOH HOH . 
J 4 HOH B 22 222 89 HOH HOH . 
J 4 HOH B 23 223 93 HOH HOH . 
J 4 HOH B 24 224 99 HOH HOH . 
J 4 HOH B 25 225 100 HOH HOH . 
J 4 HOH B 26 226 101 HOH HOH . 
J 4 HOH B 27 227 102 HOH HOH . 
J 4 HOH B 28 228 110 HOH HOH . 
J 4 HOH B 29 229 111 HOH HOH . 
J 4 HOH B 30 230 122 HOH HOH . 
J 4 HOH B 31 231 125 HOH HOH . 
J 4 HOH B 32 232 126 HOH HOH . 
J 4 HOH B 33 233 132 HOH HOH . 
J 4 HOH B 34 234 139 HOH HOH . 
K 4 HOH C 1 301 8 HOH HOH . 
K 4 HOH C 2 302 11 HOH HOH . 
K 4 HOH C 3 303 23 HOH HOH . 
K 4 HOH C 4 304 25 HOH HOH . 
K 4 HOH C 5 305 27 HOH HOH . 
K 4 HOH C 6 306 30 HOH HOH . 
K 4 HOH C 7 307 34 HOH HOH . 
K 4 HOH C 8 308 36 HOH HOH . 
K 4 HOH C 9 309 42 HOH HOH . 
K 4 HOH C 10 310 44 HOH HOH . 
K 4 HOH C 11 311 47 HOH HOH . 
K 4 HOH C 12 312 51 HOH HOH . 
K 4 HOH C 13 313 53 HOH HOH . 
K 4 HOH C 14 314 70 HOH HOH . 
K 4 HOH C 15 315 71 HOH HOH . 
K 4 HOH C 16 316 74 HOH HOH . 
K 4 HOH C 17 317 77 HOH HOH . 
K 4 HOH C 18 318 80 HOH HOH . 
K 4 HOH C 19 319 87 HOH HOH . 
K 4 HOH C 20 320 90 HOH HOH . 
K 4 HOH C 21 321 94 HOH HOH . 
K 4 HOH C 22 322 97 HOH HOH . 
K 4 HOH C 23 323 112 HOH HOH . 
K 4 HOH C 24 324 113 HOH HOH . 
K 4 HOH C 25 325 114 HOH HOH . 
K 4 HOH C 26 326 116 HOH HOH . 
K 4 HOH C 27 327 121 HOH HOH . 
K 4 HOH C 28 328 123 HOH HOH . 
K 4 HOH C 29 329 137 HOH HOH . 
K 4 HOH C 30 330 138 HOH HOH . 
L 4 HOH D 1 301 1 HOH HOH . 
L 4 HOH D 2 302 3 HOH HOH . 
L 4 HOH D 3 303 9 HOH HOH . 
L 4 HOH D 4 304 12 HOH HOH . 
L 4 HOH D 5 305 17 HOH HOH . 
L 4 HOH D 6 306 22 HOH HOH . 
L 4 HOH D 7 307 26 HOH HOH . 
L 4 HOH D 8 308 33 HOH HOH . 
L 4 HOH D 9 309 38 HOH HOH . 
L 4 HOH D 10 310 40 HOH HOH . 
L 4 HOH D 11 311 41 HOH HOH . 
L 4 HOH D 12 312 43 HOH HOH . 
L 4 HOH D 13 313 52 HOH HOH . 
L 4 HOH D 14 314 56 HOH HOH . 
L 4 HOH D 15 315 64 HOH HOH . 
L 4 HOH D 16 316 66 HOH HOH . 
L 4 HOH D 17 317 67 HOH HOH . 
L 4 HOH D 18 318 72 HOH HOH . 
L 4 HOH D 19 319 73 HOH HOH . 
L 4 HOH D 20 320 83 HOH HOH . 
L 4 HOH D 21 321 88 HOH HOH . 
L 4 HOH D 22 322 95 HOH HOH . 
L 4 HOH D 23 323 105 HOH HOH . 
L 4 HOH D 24 324 118 HOH HOH . 
L 4 HOH D 25 325 124 HOH HOH . 
L 4 HOH D 26 326 129 HOH HOH . 
L 4 HOH D 27 327 131 HOH HOH . 
L 4 HOH D 28 328 140 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SCN . . . G 2 42.682 105.094 1.873 1 32.34 ? S SCN 201 D 1 
HETATM 2 C C SCN . . . G 2 43.14 106.762 1.389 1 32.04 ? C SCN 201 D 1 
HETATM 3 N N SCN . . . G 2 43.74 107.769 1.053 1 31.92 ? N SCN 201 D 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           3 
#