data_4FGG # _model_server_result.job_id F5UgFvcx9grl2H3Q3Rd5_g _model_server_result.datetime_utc '2024-11-22 02:21:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fgg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 4FGG # _exptl.entry_id 4FGG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 540.656 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2E)-3-{5-[(2,4-diamino-6-propylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4FGG _cell.length_a 79.012 _cell.length_b 79.012 _cell.length_c 107.529 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FGG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C31 H36 N6 O3' _chem_comp.formula_weight 540.656 _chem_comp.id 0U5 _chem_comp.mon_nstd_flag . _chem_comp.name (2E)-3-{5-[(2,4-diamino-6-propylpyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(2-methylprop-1-en-1-yl)phthalazin-2(1H)-yl]prop-2-en-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 HN01 0U5 sing 1 n n N01 HN0A 0U5 sing 2 n n C02 N01 0U5 sing 3 n n C02 N36 0U5 sing 4 n y C03 C02 0U5 doub 5 n y C04 C03 0U5 sing 6 n n C04 H04 0U5 sing 7 n n C04 H04A 0U5 sing 8 n n C05 C04 0U5 sing 9 n n C05 C31 0U5 sing 10 n y C06 C05 0U5 doub 11 n y C06 H06 0U5 sing 12 n n C07 C06 0U5 sing 13 n y C07 C10 0U5 doub 14 n y O08 C07 0U5 sing 15 n n C09 O08 0U5 sing 16 n n C09 H09 0U5 sing 17 n n C09 H09A 0U5 sing 18 n n C09 H09B 0U5 sing 19 n n C10 C13 0U5 sing 20 n y O11 C10 0U5 sing 21 n n C12 O11 0U5 sing 22 n n C12 H12 0U5 sing 23 n n C12 H12A 0U5 sing 24 n n C12 H12B 0U5 sing 25 n n C13 C14 0U5 sing 26 n n C13 C31 0U5 doub 27 n y C14 C15 0U5 doub 28 e n C14 H14 0U5 sing 29 n n C15 C16 0U5 sing 30 n n C15 H15 0U5 sing 31 n n C16 N17 0U5 sing 32 n n N17 C20 0U5 sing 33 n n N17 N18 0U5 sing 34 n n N18 C19 0U5 doub 35 n n C19 C25 0U5 sing 36 n n C20 C24 0U5 sing 37 n n C20 H20 0U5 sing 38 n n C21 C20 0U5 sing 39 n n C21 H21 0U5 sing 40 n n C22 C21 0U5 doub 41 n n C22 C37 0U5 sing 42 n n C23 C22 0U5 sing 43 n n C23 H23 0U5 sing 44 n n C23 H23A 0U5 sing 45 n n C23 H22 0U5 sing 46 n n C24 C29 0U5 doub 47 n y C24 C25 0U5 sing 48 n y C25 C26 0U5 doub 49 n y C26 C27 0U5 sing 50 n y C26 H26 0U5 sing 51 n n C27 H27 0U5 sing 52 n n C28 C27 0U5 doub 53 n y C28 H28 0U5 sing 54 n n C29 C28 0U5 sing 55 n y C29 H29 0U5 sing 56 n n O30 C16 0U5 doub 57 n n C31 H31 0U5 sing 58 n n C32 C03 0U5 sing 59 n y C32 N33 0U5 doub 60 n y N33 C34 0U5 sing 61 n y C34 N35 0U5 sing 62 n n C34 N36 0U5 doub 63 n y N35 HN35 0U5 sing 64 n n N35 HN3A 0U5 sing 65 n n C37 H37 0U5 sing 66 n n C37 H37A 0U5 sing 67 n n C37 H37B 0U5 sing 68 n n C38 C32 0U5 sing 69 n n C38 C39 0U5 sing 70 n n C38 H38 0U5 sing 71 n n C38 H38A 0U5 sing 72 n n C39 H39 0U5 sing 73 n n C39 H36 0U5 sing 74 n n C40 C39 0U5 sing 75 n n C40 H40 0U5 sing 76 n n C40 H40A 0U5 sing 77 n n C40 H391 0U5 sing 78 n n C19 H19 0U5 sing 79 n n # _atom_sites.entry_id 4FGG _atom_sites.fract_transf_matrix[1][1] 0.012656 _atom_sites.fract_transf_matrix[1][2] 0.007307 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0U5 A 1 200 200 0U5 0U5 . C 3 NAP A 1 201 201 NAP NAP . D 4 GOL A 1 202 202 GOL GOL . E 5 HOH A 1 301 1 HOH HOH . E 5 HOH A 2 302 2 HOH HOH . E 5 HOH A 3 303 3 HOH HOH . E 5 HOH A 4 304 4 HOH HOH . E 5 HOH A 5 305 5 HOH HOH . E 5 HOH A 6 306 6 HOH HOH . E 5 HOH A 7 307 7 HOH HOH . E 5 HOH A 8 308 8 HOH HOH . E 5 HOH A 9 309 9 HOH HOH . E 5 HOH A 10 310 10 HOH HOH . E 5 HOH A 11 311 11 HOH HOH . E 5 HOH A 12 312 12 HOH HOH . E 5 HOH A 13 313 13 HOH HOH . E 5 HOH A 14 314 14 HOH HOH . E 5 HOH A 15 315 15 HOH HOH . E 5 HOH A 16 316 16 HOH HOH . E 5 HOH A 17 317 17 HOH HOH . E 5 HOH A 18 318 18 HOH HOH . E 5 HOH A 19 319 19 HOH HOH . E 5 HOH A 20 320 20 HOH HOH . E 5 HOH A 21 321 21 HOH HOH . E 5 HOH A 22 322 22 HOH HOH . E 5 HOH A 23 323 23 HOH HOH . E 5 HOH A 24 324 24 HOH HOH . E 5 HOH A 25 325 25 HOH HOH . E 5 HOH A 26 326 26 HOH HOH . E 5 HOH A 27 327 27 HOH HOH . E 5 HOH A 28 328 28 HOH HOH . E 5 HOH A 29 329 29 HOH HOH . E 5 HOH A 30 330 30 HOH HOH . E 5 HOH A 31 331 31 HOH HOH . E 5 HOH A 32 332 32 HOH HOH . E 5 HOH A 33 333 33 HOH HOH . E 5 HOH A 34 334 34 HOH HOH . E 5 HOH A 35 335 35 HOH HOH . E 5 HOH A 36 336 36 HOH HOH . E 5 HOH A 37 337 37 HOH HOH . E 5 HOH A 38 338 38 HOH HOH . E 5 HOH A 39 339 39 HOH HOH . E 5 HOH A 40 340 40 HOH HOH . E 5 HOH A 41 341 41 HOH HOH . E 5 HOH A 42 342 42 HOH HOH . E 5 HOH A 43 343 43 HOH HOH . E 5 HOH A 44 344 44 HOH HOH . E 5 HOH A 45 345 45 HOH HOH . E 5 HOH A 46 346 46 HOH HOH . E 5 HOH A 47 347 47 HOH HOH . E 5 HOH A 48 348 48 HOH HOH . E 5 HOH A 49 349 49 HOH HOH . E 5 HOH A 50 350 50 HOH HOH . E 5 HOH A 51 351 51 HOH HOH . E 5 HOH A 52 352 52 HOH HOH . E 5 HOH A 53 353 53 HOH HOH . E 5 HOH A 54 354 54 HOH HOH . E 5 HOH A 55 355 55 HOH HOH . E 5 HOH A 56 356 56 HOH HOH . E 5 HOH A 57 357 57 HOH HOH . E 5 HOH A 58 358 58 HOH HOH . E 5 HOH A 59 359 59 HOH HOH . E 5 HOH A 60 360 60 HOH HOH . E 5 HOH A 61 361 61 HOH HOH . E 5 HOH A 62 362 62 HOH HOH . E 5 HOH A 63 363 63 HOH HOH . E 5 HOH A 64 364 64 HOH HOH . E 5 HOH A 65 365 65 HOH HOH . E 5 HOH A 66 366 66 HOH HOH . E 5 HOH A 67 367 67 HOH HOH . E 5 HOH A 68 368 68 HOH HOH . E 5 HOH A 69 369 69 HOH HOH . E 5 HOH A 70 370 70 HOH HOH . E 5 HOH A 71 371 71 HOH HOH . E 5 HOH A 72 372 72 HOH HOH . E 5 HOH A 73 373 73 HOH HOH . E 5 HOH A 74 374 74 HOH HOH . E 5 HOH A 75 375 75 HOH HOH . E 5 HOH A 76 376 76 HOH HOH . E 5 HOH A 77 377 77 HOH HOH . E 5 HOH A 78 378 78 HOH HOH . E 5 HOH A 79 379 79 HOH HOH . E 5 HOH A 80 380 80 HOH HOH . E 5 HOH A 81 381 81 HOH HOH . E 5 HOH A 82 382 82 HOH HOH . E 5 HOH A 83 383 83 HOH HOH . E 5 HOH A 84 384 84 HOH HOH . E 5 HOH A 85 385 85 HOH HOH . E 5 HOH A 86 386 86 HOH HOH . E 5 HOH A 87 387 87 HOH HOH . E 5 HOH A 88 388 88 HOH HOH . E 5 HOH A 89 389 89 HOH HOH . E 5 HOH A 90 390 90 HOH HOH . E 5 HOH A 91 391 91 HOH HOH . E 5 HOH A 92 392 92 HOH HOH . E 5 HOH A 93 393 93 HOH HOH . E 5 HOH A 94 394 94 HOH HOH . E 5 HOH A 95 395 95 HOH HOH . E 5 HOH A 96 396 96 HOH HOH . E 5 HOH A 97 397 97 HOH HOH . E 5 HOH A 98 398 98 HOH HOH . E 5 HOH A 99 399 99 HOH HOH . E 5 HOH A 100 400 100 HOH HOH . E 5 HOH A 101 401 101 HOH HOH . E 5 HOH A 102 402 102 HOH HOH . E 5 HOH A 103 403 103 HOH HOH . E 5 HOH A 104 404 104 HOH HOH . E 5 HOH A 105 405 105 HOH HOH . E 5 HOH A 106 406 106 HOH HOH . E 5 HOH A 107 407 107 HOH HOH . E 5 HOH A 108 408 108 HOH HOH . E 5 HOH A 109 409 109 HOH HOH . E 5 HOH A 110 410 110 HOH HOH . E 5 HOH A 111 411 111 HOH HOH . E 5 HOH A 112 412 112 HOH HOH . E 5 HOH A 113 413 113 HOH HOH . E 5 HOH A 114 414 114 HOH HOH . E 5 HOH A 115 415 115 HOH HOH . E 5 HOH A 116 416 116 HOH HOH . E 5 HOH A 117 417 117 HOH HOH . E 5 HOH A 118 418 118 HOH HOH . E 5 HOH A 119 419 119 HOH HOH . E 5 HOH A 120 420 120 HOH HOH . E 5 HOH A 121 421 121 HOH HOH . E 5 HOH A 122 422 122 HOH HOH . E 5 HOH A 123 423 123 HOH HOH . E 5 HOH A 124 424 124 HOH HOH . E 5 HOH A 125 425 125 HOH HOH . E 5 HOH A 126 426 126 HOH HOH . E 5 HOH A 127 427 127 HOH HOH . E 5 HOH A 128 428 128 HOH HOH . E 5 HOH A 129 429 129 HOH HOH . E 5 HOH A 130 430 130 HOH HOH . E 5 HOH A 131 431 131 HOH HOH . E 5 HOH A 132 432 132 HOH HOH . E 5 HOH A 133 433 133 HOH HOH . E 5 HOH A 134 434 134 HOH HOH . E 5 HOH A 135 435 135 HOH HOH . E 5 HOH A 136 436 136 HOH HOH . E 5 HOH A 137 437 137 HOH HOH . E 5 HOH A 138 438 138 HOH HOH . E 5 HOH A 139 439 139 HOH HOH . E 5 HOH A 140 440 140 HOH HOH . E 5 HOH A 141 441 141 HOH HOH . E 5 HOH A 142 442 142 HOH HOH . E 5 HOH A 143 443 143 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 0U5 . . . B 2 -3.35 28.659 -3.004 1 12.23 ? N01 0U5 200 A 1 HETATM 2 C C02 0U5 . . . B 2 -4.549 28.672 -3.826 1 13.42 ? C02 0U5 200 A 1 HETATM 3 C C03 0U5 . . . B 2 -4.837 29.735 -4.736 1 15.48 ? C03 0U5 200 A 1 HETATM 4 C C04 0U5 . . . B 2 -3.808 30.884 -4.796 1 17.86 ? C04 0U5 200 A 1 HETATM 5 C C05 0U5 . . . B 2 -4.173 32.086 -5.686 1 19.93 ? C05 0U5 200 A 1 HETATM 6 C C06 0U5 . . . B 2 -3.439 32.347 -6.86 1 20.1 ? C06 0U5 200 A 1 HETATM 7 C C07 0U5 . . . B 2 -3.78 33.444 -7.665 1 21.41 ? C07 0U5 200 A 1 HETATM 8 O O08 0U5 . . . B 2 -3.053 33.679 -8.828 1 21.24 ? O08 0U5 200 A 1 HETATM 9 C C09 0U5 . . . B 2 -1.744 33.207 -8.942 1 20.71 ? C09 0U5 200 A 1 HETATM 10 C C10 0U5 . . . B 2 -4.842 34.276 -7.281 1 23.09 ? C10 0U5 200 A 1 HETATM 11 O O11 0U5 . . . B 2 -5.227 35.368 -8.042 1 24.21 ? O11 0U5 200 A 1 HETATM 12 C C12 0U5 . . . B 2 -6.348 35.237 -8.876 1 24.04 ? C12 0U5 200 A 1 HETATM 13 C C13 0U5 . . . B 2 -5.567 34.018 -6.098 1 23.41 ? C13 0U5 200 A 1 HETATM 14 C C14 0U5 . . . B 2 -6.733 34.951 -5.726 1 26.17 ? C14 0U5 200 A 1 HETATM 15 C C15 0U5 . . . B 2 -6.855 35.608 -4.498 1 28.72 ? C15 0U5 200 A 1 HETATM 16 C C16 0U5 . . . B 2 -8.129 36.452 -4.275 1 31.89 ? C16 0U5 200 A 1 HETATM 17 N N17 0U5 . . . B 2 -8.802 36.425 -3.003 1 34.58 ? N17 0U5 200 A 1 HETATM 18 N N18 0U5 . . . B 2 -8.246 35.641 -2.031 1 34.75 ? N18 0U5 200 A 1 HETATM 19 C C19 0U5 . . . B 2 -8.918 35.552 -0.768 1 35.84 ? C19 0U5 200 A 1 HETATM 20 C C20 0U5 . . . B 2 -10.005 37.212 -2.772 1 36.96 ? C20 0U5 200 A 1 HETATM 21 C C21 0U5 . . . B 2 -11.303 36.45 -3.141 1 45 ? C21 0U5 200 A 1 HETATM 22 C C22 0U5 . . . B 2 -12.469 37.241 -3.753 1 46.11 ? C22 0U5 200 A 1 HETATM 23 C C23 0U5 . . . B 2 -12.492 37.919 -5.046 1 47.27 ? C23 0U5 200 A 1 HETATM 24 C C24 0U5 . . . B 2 -10.131 37.644 -1.34 1 38.33 ? C24 0U5 200 A 1 HETATM 25 C C25 0U5 . . . B 2 -9.593 36.83 -0.36 1 37.8 ? C25 0U5 200 A 1 HETATM 26 C C26 0U5 . . . B 2 -9.688 37.206 1.025 1 38.6 ? C26 0U5 200 A 1 HETATM 27 C C27 0U5 . . . B 2 -10.331 38.406 1.371 1 40.26 ? C27 0U5 200 A 1 HETATM 28 C C28 0U5 . . . B 2 -10.88 39.237 0.367 1 40.96 ? C28 0U5 200 A 1 HETATM 29 C C29 0U5 . . . B 2 -10.785 38.868 -0.989 1 40.05 ? C29 0U5 200 A 1 HETATM 30 O O30 0U5 . . . B 2 -8.557 37.123 -5.192 1 32.58 ? O30 0U5 200 A 1 HETATM 31 C C31 0U5 . . . B 2 -5.232 32.924 -5.303 1 21.44 ? C31 0U5 200 A 1 HETATM 32 C C32 0U5 . . . B 2 -6.05 29.597 -5.501 1 14.93 ? C32 0U5 200 A 1 HETATM 33 N N33 0U5 . . . B 2 -6.831 28.502 -5.298 1 14.11 ? N33 0U5 200 A 1 HETATM 34 C C34 0U5 . . . B 2 -6.515 27.542 -4.418 1 12.35 ? C34 0U5 200 A 1 HETATM 35 N N35 0U5 . . . B 2 -7.388 26.402 -4.247 1 10.4 ? N35 0U5 200 A 1 HETATM 36 N N36 0U5 . . . B 2 -5.38 27.627 -3.697 1 12.93 ? N36 0U5 200 A 1 HETATM 37 C C37 0U5 . . . B 2 -13.853 36.913 -3.136 1 34.88 ? C37 0U5 200 A 1 HETATM 38 C C38 0U5 . . . B 2 -6.63 30.584 -6.529 1 15.72 ? C38 0U5 200 A 1 HETATM 39 C C39 0U5 . . . B 2 -8.065 31.001 -6.254 1 16.3 ? C39 0U5 200 A 1 HETATM 40 C C40 0U5 . . . B 2 -8.71 32.072 -7.092 1 16.7 ? C40 0U5 200 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 40 #