data_4FHD
#
_model_server_result.job_id            iYpzLKp9JqGhrxhmDU0-8w 
_model_server_result.datetime_utc      '2024-11-20 11:29:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4fhd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":409}' 
#
_entry.id    4FHD 
#
_exptl.entry_id    4FHD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.959 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PYROPHOSPHATE 2-' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4FHD 
_cell.length_a            53.32 
_cell.length_b            58.92 
_cell.length_c            131.62 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4FHD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 117 A CYS 90 1_555 B FE1 SF4 . A SF4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc2 A SG CYS 121 A CYS 94 1_555 B FE4 SF4 . A SF4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc3 A SG CYS 124 A CYS 97 1_555 B FE2 SF4 . A SF4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc4 B FE3 SF4 . A SF4 401 1_555 C O EEM . A EEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
metalc ? metalc5 B FE3 SF4 . A SF4 401 1_555 C N EEM . A EEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
#
_chem_comp.formula           'H2 O7 P2 -2' 
_chem_comp.formula_weight    175.959 
_chem_comp.id                POP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PYROPHOSPHATE 2-' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1 POP doub 377 n n 
P1 O2 POP sing 378 n n 
P1 O3 POP sing 379 n n 
P1 O POP sing 380 n n 
O2 HO2 POP sing 381 n n 
O P2 POP sing 382 n n 
P2 O4 POP doub 383 n n 
P2 O5 POP sing 384 n n 
P2 O6 POP sing 385 n n 
O5 HO5 POP sing 386 n n 
#
_atom_sites.entry_id                     4FHD 
_atom_sites.fract_transf_matrix[1][1]    0.018755 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016972 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007598 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SF4 A 1 401 1 SF4 FS4 . 
C 3 EEM A 1 402 1 EEM SA2 . 
D 4 SO4 A 1 403 1 SO4 SO4 . 
E 4 SO4 A 1 404 2 SO4 SO4 . 
F 4 SO4 A 1 405 3 SO4 SO4 . 
G 4 SO4 A 1 406 4 SO4 SO4 . 
H 4 SO4 A 1 407 5 SO4 SO4 . 
I 5 0TT A 1 408 1 0TT SP . 
J 6 POP A 1 409 1 POP POP . 
K 7 HOH A 1 501 1 HOH HOH . 
K 7 HOH A 2 502 2 HOH HOH . 
K 7 HOH A 3 503 3 HOH HOH . 
K 7 HOH A 4 504 4 HOH HOH . 
K 7 HOH A 5 505 5 HOH HOH . 
K 7 HOH A 6 506 6 HOH HOH . 
K 7 HOH A 7 507 7 HOH HOH . 
K 7 HOH A 8 508 8 HOH HOH . 
K 7 HOH A 9 509 9 HOH HOH . 
K 7 HOH A 10 510 10 HOH HOH . 
K 7 HOH A 11 511 11 HOH HOH . 
K 7 HOH A 12 512 14 HOH HOH . 
K 7 HOH A 13 513 15 HOH HOH . 
K 7 HOH A 14 514 16 HOH HOH . 
K 7 HOH A 15 515 17 HOH HOH . 
K 7 HOH A 16 516 18 HOH HOH . 
K 7 HOH A 17 517 19 HOH HOH . 
K 7 HOH A 18 518 22 HOH HOH . 
K 7 HOH A 19 519 23 HOH HOH . 
K 7 HOH A 20 520 24 HOH HOH . 
K 7 HOH A 21 521 27 HOH HOH . 
K 7 HOH A 22 522 28 HOH HOH . 
K 7 HOH A 23 523 29 HOH HOH . 
K 7 HOH A 24 524 30 HOH HOH . 
K 7 HOH A 25 525 31 HOH HOH . 
K 7 HOH A 26 526 32 HOH HOH . 
K 7 HOH A 27 527 34 HOH HOH . 
K 7 HOH A 28 528 35 HOH HOH . 
K 7 HOH A 29 529 36 HOH HOH . 
K 7 HOH A 30 530 37 HOH HOH . 
K 7 HOH A 31 531 38 HOH HOH . 
K 7 HOH A 32 532 39 HOH HOH . 
K 7 HOH A 33 533 40 HOH HOH . 
K 7 HOH A 34 534 41 HOH HOH . 
K 7 HOH A 35 535 42 HOH HOH . 
K 7 HOH A 36 536 43 HOH HOH . 
K 7 HOH A 37 537 44 HOH HOH . 
K 7 HOH A 38 538 45 HOH HOH . 
K 7 HOH A 39 539 46 HOH HOH . 
K 7 HOH A 40 540 47 HOH HOH . 
K 7 HOH A 41 541 48 HOH HOH . 
K 7 HOH A 42 542 49 HOH HOH . 
K 7 HOH A 43 543 50 HOH HOH . 
K 7 HOH A 44 544 51 HOH HOH . 
K 7 HOH A 45 545 52 HOH HOH . 
K 7 HOH A 46 546 53 HOH HOH . 
K 7 HOH A 47 547 54 HOH HOH . 
K 7 HOH A 48 548 55 HOH HOH . 
K 7 HOH A 49 549 56 HOH HOH . 
K 7 HOH A 50 550 57 HOH HOH . 
K 7 HOH A 51 551 58 HOH HOH . 
K 7 HOH A 52 552 59 HOH HOH . 
K 7 HOH A 53 553 60 HOH HOH . 
K 7 HOH A 54 554 61 HOH HOH . 
K 7 HOH A 55 555 62 HOH HOH . 
K 7 HOH A 56 556 63 HOH HOH . 
K 7 HOH A 57 557 64 HOH HOH . 
K 7 HOH A 58 558 65 HOH HOH . 
K 7 HOH A 59 559 66 HOH HOH . 
K 7 HOH A 60 560 68 HOH HOH . 
K 7 HOH A 61 561 69 HOH HOH . 
K 7 HOH A 62 562 70 HOH HOH . 
K 7 HOH A 63 563 73 HOH HOH . 
K 7 HOH A 64 564 75 HOH HOH . 
K 7 HOH A 65 565 77 HOH HOH . 
K 7 HOH A 66 566 78 HOH HOH . 
K 7 HOH A 67 567 80 HOH HOH . 
K 7 HOH A 68 568 81 HOH HOH . 
K 7 HOH A 69 569 82 HOH HOH . 
K 7 HOH A 70 570 83 HOH HOH . 
K 7 HOH A 71 571 84 HOH HOH . 
K 7 HOH A 72 572 85 HOH HOH . 
K 7 HOH A 73 573 86 HOH HOH . 
K 7 HOH A 74 574 87 HOH HOH . 
K 7 HOH A 75 575 88 HOH HOH . 
K 7 HOH A 76 576 89 HOH HOH . 
K 7 HOH A 77 577 94 HOH HOH . 
K 7 HOH A 78 578 95 HOH HOH . 
K 7 HOH A 79 579 96 HOH HOH . 
K 7 HOH A 80 580 98 HOH HOH . 
K 7 HOH A 81 581 99 HOH HOH . 
K 7 HOH A 82 582 108 HOH HOH . 
K 7 HOH A 83 583 109 HOH HOH . 
K 7 HOH A 84 584 110 HOH HOH . 
K 7 HOH A 85 585 111 HOH HOH . 
K 7 HOH A 86 586 114 HOH HOH . 
K 7 HOH A 87 587 118 HOH HOH . 
K 7 HOH A 88 588 121 HOH HOH . 
K 7 HOH A 89 589 122 HOH HOH . 
K 7 HOH A 90 590 126 HOH HOH . 
K 7 HOH A 91 591 130 HOH HOH . 
K 7 HOH A 92 592 131 HOH HOH . 
K 7 HOH A 93 593 132 HOH HOH . 
K 7 HOH A 94 594 133 HOH HOH . 
K 7 HOH A 95 595 135 HOH HOH . 
K 7 HOH A 96 596 136 HOH HOH . 
K 7 HOH A 97 597 137 HOH HOH . 
K 7 HOH A 98 598 138 HOH HOH . 
K 7 HOH A 99 599 139 HOH HOH . 
K 7 HOH A 100 600 140 HOH HOH . 
K 7 HOH A 101 601 141 HOH HOH . 
K 7 HOH A 102 602 142 HOH HOH . 
K 7 HOH A 103 603 143 HOH HOH . 
K 7 HOH A 104 604 144 HOH HOH . 
K 7 HOH A 105 605 145 HOH HOH . 
K 7 HOH A 106 606 146 HOH HOH . 
K 7 HOH A 107 607 147 HOH HOH . 
K 7 HOH A 108 608 148 HOH HOH . 
K 7 HOH A 109 609 149 HOH HOH . 
K 7 HOH A 110 610 150 HOH HOH . 
K 7 HOH A 111 611 151 HOH HOH . 
K 7 HOH A 112 612 152 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 POP . . . J 6 -22.012 -1.946 29.838 0.5 51.04 ? P1 POP 409 A 1 
HETATM 2 O O1 POP . . . J 6 -21.308 -0.868 29.044 0.5 50.82 ? O1 POP 409 A 1 
HETATM 3 O O2 POP . . . J 6 -22.32 -1.412 31.219 0.5 50.64 ? O2 POP 409 A 1 
HETATM 4 O O3 POP . . . J 6 -23.292 -2.331 29.139 0.5 50.23 ? O3 POP 409 A 1 
HETATM 5 O O POP . . . J 6 -21.039 -3.222 29.956 0.5 50.81 ? O POP 409 A 1 
HETATM 6 P P2 POP . . . J 6 -19.801 -3.21 30.988 0.5 50.98 ? P2 POP 409 A 1 
HETATM 7 O O4 POP . . . J 6 -18.489 -3.124 30.252 0.5 50.96 ? O4 POP 409 A 1 
HETATM 8 O O5 POP . . . J 6 -19.915 -2.021 31.914 0.5 51.27 ? O5 POP 409 A 1 
HETATM 9 O O6 POP . . . J 6 -19.856 -4.49 31.789 0.5 51.09 ? O6 POP 409 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#