data_4FHF # _model_server_result.job_id fRdRypW5JMdjRO4UxtuZ7A _model_server_result.datetime_utc '2024-11-20 11:40:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4fhf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4FHF # _exptl.entry_id 4FHF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4FHF _cell.length_a 53.2 _cell.length_b 58.99 _cell.length_c 131.48 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4FHF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 117 A CYS 90 1_555 B FE4 SF4 . A SF4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc2 A SG CYS 121 A CYS 94 1_555 B FE1 SF4 . A SF4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc3 A SG CYS 124 A CYS 97 1_555 B FE3 SF4 . A SF4 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc4 B FE2 SF4 . A SF4 401 1_555 C N EEM . A EEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc5 B FE2 SF4 . A SF4 401 1_555 C O EEM . A EEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 417 n n FE1 S3 SF4 sing 418 n n FE1 S4 SF4 sing 419 n n FE2 S1 SF4 sing 420 n n FE2 S3 SF4 sing 421 n n FE2 S4 SF4 sing 422 n n FE3 S1 SF4 sing 423 n n FE3 S2 SF4 sing 424 n n FE3 S4 SF4 sing 425 n n FE4 S1 SF4 sing 426 n n FE4 S2 SF4 sing 427 n n FE4 S3 SF4 sing 428 n n # _atom_sites.entry_id 4FHF _atom_sites.fract_transf_matrix[1][1] 0.018797 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016952 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 401 1 SF4 FS4 . C 3 EEM A 1 402 1 EEM SA2 . D 4 SO4 A 1 403 1 SO4 SO4 . E 4 SO4 A 1 404 2 SO4 SO4 . F 4 SO4 A 1 405 3 SO4 SO4 . G 4 SO4 A 1 406 4 SO4 SO4 . H 4 SO4 A 1 407 6 SO4 SO4 . I 5 POP A 1 408 7 POP POP . J 6 0TT A 1 409 1 0TT SP . K 7 HOH A 1 501 1 HOH HOH . K 7 HOH A 2 502 2 HOH HOH . K 7 HOH A 3 503 3 HOH HOH . K 7 HOH A 4 504 4 HOH HOH . K 7 HOH A 5 505 5 HOH HOH . K 7 HOH A 6 506 6 HOH HOH . K 7 HOH A 7 507 7 HOH HOH . K 7 HOH A 8 508 8 HOH HOH . K 7 HOH A 9 509 9 HOH HOH . K 7 HOH A 10 510 10 HOH HOH . K 7 HOH A 11 511 11 HOH HOH . K 7 HOH A 12 512 12 HOH HOH . K 7 HOH A 13 513 13 HOH HOH . K 7 HOH A 14 514 14 HOH HOH . K 7 HOH A 15 515 15 HOH HOH . K 7 HOH A 16 516 16 HOH HOH . K 7 HOH A 17 517 17 HOH HOH . K 7 HOH A 18 518 18 HOH HOH . K 7 HOH A 19 519 21 HOH HOH . K 7 HOH A 20 520 22 HOH HOH . K 7 HOH A 21 521 23 HOH HOH . K 7 HOH A 22 522 26 HOH HOH . K 7 HOH A 23 523 28 HOH HOH . K 7 HOH A 24 524 29 HOH HOH . K 7 HOH A 25 525 30 HOH HOH . K 7 HOH A 26 526 31 HOH HOH . K 7 HOH A 27 527 33 HOH HOH . K 7 HOH A 28 528 34 HOH HOH . K 7 HOH A 29 529 36 HOH HOH . K 7 HOH A 30 530 37 HOH HOH . K 7 HOH A 31 531 38 HOH HOH . K 7 HOH A 32 532 39 HOH HOH . K 7 HOH A 33 533 41 HOH HOH . K 7 HOH A 34 534 43 HOH HOH . K 7 HOH A 35 535 44 HOH HOH . K 7 HOH A 36 536 45 HOH HOH . K 7 HOH A 37 537 46 HOH HOH . K 7 HOH A 38 538 47 HOH HOH . K 7 HOH A 39 539 49 HOH HOH . K 7 HOH A 40 540 51 HOH HOH . K 7 HOH A 41 541 52 HOH HOH . K 7 HOH A 42 542 54 HOH HOH . K 7 HOH A 43 543 57 HOH HOH . K 7 HOH A 44 544 59 HOH HOH . K 7 HOH A 45 545 60 HOH HOH . K 7 HOH A 46 546 61 HOH HOH . K 7 HOH A 47 547 62 HOH HOH . K 7 HOH A 48 548 63 HOH HOH . K 7 HOH A 49 549 65 HOH HOH . K 7 HOH A 50 550 66 HOH HOH . K 7 HOH A 51 551 69 HOH HOH . K 7 HOH A 52 552 73 HOH HOH . K 7 HOH A 53 553 74 HOH HOH . K 7 HOH A 54 554 75 HOH HOH . K 7 HOH A 55 555 77 HOH HOH . K 7 HOH A 56 556 79 HOH HOH . K 7 HOH A 57 557 81 HOH HOH . K 7 HOH A 58 558 82 HOH HOH . K 7 HOH A 59 559 83 HOH HOH . K 7 HOH A 60 560 84 HOH HOH . K 7 HOH A 61 561 85 HOH HOH . K 7 HOH A 62 562 86 HOH HOH . K 7 HOH A 63 563 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 -31.512 2.912 -16.435 1 38.72 ? FE1 SF4 401 A 1 HETATM 2 FE FE2 SF4 . . . B 2 -28.909 2.09 -16.276 1 39.14 ? FE2 SF4 401 A 1 HETATM 3 FE FE3 SF4 . . . B 2 -30.697 0.963 -18.077 1 38.99 ? FE3 SF4 401 A 1 HETATM 4 FE FE4 SF4 . . . B 2 -30.914 0.473 -15.464 1 38.9 ? FE4 SF4 401 A 1 HETATM 5 S S1 SF4 . . . B 2 -29.139 -0.139 -16.798 1 39.69 ? S1 SF4 401 A 1 HETATM 6 S S2 SF4 . . . B 2 -32.664 0.963 -16.88 1 40.15 ? S2 SF4 401 A 1 HETATM 7 S S3 SF4 . . . B 2 -30.331 2.482 -14.512 1 39.51 ? S3 SF4 401 A 1 HETATM 8 S S4 SF4 . . . B 2 -29.91 3.123 -18.073 1 39.69 ? S4 SF4 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #